RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 UBA5Q9GZZ9 404 aa23.53■■□□□ 1.36
CLN6-222ENST00000637667 STXBP5LQ9Y2K9 1186 aa23.53■■□□□ 1.36
CLN6-222ENST00000637667 Q9Y3F1 56 aa23.53■■□□□ 1.36
CLN6-222ENST00000637667 CABYRO75952 493 aa23.52■■□□□ 1.36
CLN6-222ENST00000637667 TIMP1P01033 207 aa23.52■■□□□ 1.36
CLN6-222ENST00000637667 TMEM63BQ5T3F8 832 aa23.52■■□□□ 1.36
CLN6-222ENST00000637667 CPVLQ9H3G5 476 aa23.52■■□□□ 1.36
CLN6-222ENST00000637667 COL6A3P12111 3177 aa23.52■■□□□ 1.36
CLN6-222ENST00000637667 LAMA4Q16363 1823 aa23.52■■□□□ 1.36
CLN6-222ENST00000637667 LRRC37A2A6NM11 1700 aa23.51■■□□□ 1.35
CLN6-222ENST00000637667 ZEB2O60315 1214 aa23.51■■□□□ 1.35
CLN6-222ENST00000637667 RPS6P62753 249 aaKnown RBP23.51■■□□□ 1.35
CLN6-222ENST00000637667 FAM126BQ8IXS8 530 aa23.51■■□□□ 1.35
CLN6-222ENST00000637667 RNPC3Q96LT9 517 aaKnown RBP23.51■■□□□ 1.35
CLN6-222ENST00000637667 CNNM2Q9H8M5 875 aa23.51■■□□□ 1.35
CLN6-222ENST00000637667 TNKSO95271 1327 aa23.51■■□□□ 1.35
CLN6-222ENST00000637667 LCTP09848 1927 aa23.51■■□□□ 1.35
CLN6-222ENST00000637667 TLR3O15455 904 aaKnown RBP23.5■■□□□ 1.35
CLN6-222ENST00000637667 IRX6P78412 446 aaPredicted RBP23.5■■□□□ 1.35
CLN6-222ENST00000637667 USH1GQ495M9 461 aa23.5■■□□□ 1.35
CLN6-222ENST00000637667 DUSP28Q4G0W2 176 aa23.5■■□□□ 1.35
CLN6-222ENST00000637667 ASPRV1Q53RT3 343 aa23.5■■□□□ 1.35
CLN6-222ENST00000637667 ZNF697Q5TEC3 545 aa23.5■■□□□ 1.35
CLN6-222ENST00000637667 SLC43A3Q8NBI5 491 aa23.5■■□□□ 1.35
CLN6-222ENST00000637667 UBAC1Q9BSL1 405 aa23.5■■□□□ 1.35
CLN6-222ENST00000637667 WDR11Q9BZH6 1224 aa23.5■■□□□ 1.35
CLN6-222ENST00000637667 RAD50Q92878 1312 aa23.5■■□□□ 1.35
CLN6-222ENST00000637667 SMAD3P84022 425 aaKnown RBP23.49■■□□□ 1.35
CLN6-222ENST00000637667 CDC37Q16543 378 aaPredicted RBP23.49■■□□□ 1.35
CLN6-222ENST00000637667 MFSD5Q6N075 450 aa23.49■■□□□ 1.35
CLN6-222ENST00000637667 RBM47A0AV96 593 aaKnown RBP23.48■■□□□ 1.35
CLN6-222ENST00000637667 EDNRBP24530 442 aa23.48■■□□□ 1.35
CLN6-222ENST00000637667 PDE4DQ08499 809 aa23.48■■□□□ 1.35
CLN6-222ENST00000637667 ITGA7Q13683 1181 aa23.48■■□□□ 1.35
CLN6-222ENST00000637667 ADGRF4Q8IZF3 695 aa23.48■■□□□ 1.35
CLN6-222ENST00000637667 RGS22Q8NE09 1264 aa23.48■■□□□ 1.35
CLN6-222ENST00000637667 DNERQ8NFT8 737 aa23.48■■□□□ 1.35
CLN6-222ENST00000637667 FAM161BQ96MY7 647 aa23.48■■□□□ 1.35
CLN6-222ENST00000637667 GUCD1Q96NT3 240 aa23.48■■□□□ 1.35
CLN6-222ENST00000637667 MPHOSPH6Q99547 160 aaKnown RBP23.48■■□□□ 1.35
CLN6-222ENST00000637667 CD4P01730 458 aa23.47■■□□□ 1.35
CLN6-222ENST00000637667 PARP1P09874 1014 aaKnown RBP23.47■■□□□ 1.35
CLN6-222ENST00000637667 RUFY2Q8WXA3 655 aa23.47■■□□□ 1.35
CLN6-222ENST00000637667 SEZ6LQ9BYH1 1024 aa23.47■■□□□ 1.35
CLN6-222ENST00000637667 GRIN2DO15399 1336 aa23.47■■□□□ 1.35
CLN6-222ENST00000637667 ABCB11O95342 1321 aa23.46■■□□□ 1.35
CLN6-222ENST00000637667 CHMLP26374 656 aa23.46■■□□□ 1.35
CLN6-222ENST00000637667 PPIGQ13427 754 aaKnown RBP eCLIP23.46■■□□□ 1.357e-7■□□□□ 9.4
CLN6-222ENST00000637667 IFIT1BQ5T764 474 aaKnown RBP23.46■■□□□ 1.35
CLN6-222ENST00000637667 PPP1R12CQ9BZL4 782 aa23.46■■□□□ 1.35
CLN6-222ENST00000637667 B4DLN1 442 aa23.45■■□□□ 1.34
CLN6-222ENST00000637667 DHX16O60231 1041 aaKnown RBP23.45■■□□□ 1.34
CLN6-222ENST00000637667 MRPL12P52815 198 aaKnown RBP23.45■■□□□ 1.34
CLN6-222ENST00000637667 SEC23AQ15436 765 aa23.45■■□□□ 1.34
CLN6-222ENST00000637667 QRICH1Q2TAL8 776 aa23.45■■□□□ 1.34
CLN6-222ENST00000637667 SCFD2Q8WU76 684 aa23.45■■□□□ 1.34
CLN6-222ENST00000637667 MAF1Q9H063 256 aa23.45■■□□□ 1.34
CLN6-222ENST00000637667 CUL9Q8IWT3 2517 aa23.44■■□□□ 1.34
CLN6-222ENST00000637667 CSF2RAP15509 400 aa23.44■■□□□ 1.34
CLN6-222ENST00000637667 PSMC6P62333 389 aa23.44■■□□□ 1.34
CLN6-222ENST00000637667 PTH1RQ03431 593 aa23.44■■□□□ 1.34
CLN6-222ENST00000637667 PPP2R5BQ15173 497 aa23.44■■□□□ 1.34
CLN6-222ENST00000637667 CYB5R4Q7L1T6 521 aa23.44■■□□□ 1.34
CLN6-222ENST00000637667 TMEM199Q8N511 208 aa23.44■■□□□ 1.34
CLN6-222ENST00000637667 OR6J1Q8NGC5 347 aa23.44■■□□□ 1.34
CLN6-222ENST00000637667 SEMA6BQ9H3T3 888 aa23.44■■□□□ 1.34
CLN6-222ENST00000637667 JMJD4Q9H9V9 463 aa23.44■■□□□ 1.34
CLN6-222ENST00000637667 VAT1LQ9HCJ6 419 aa23.44■■□□□ 1.34
CLN6-222ENST00000637667 POLR3EQ9NVU0 708 aa23.44■■□□□ 1.34
CLN6-222ENST00000637667 U3KPZ7 1027 aaPredicted RBP23.44■■□□□ 1.34
CLN6-222ENST00000637667 NKRFO15226 690 aaKnown RBP eCLIP23.43■■□□□ 1.34
CLN6-222ENST00000637667 CYP2C18P33260 490 aa23.43■■□□□ 1.34
CLN6-222ENST00000637667 CPT1AP50416 773 aa23.43■■□□□ 1.34
CLN6-222ENST00000637667 TRDNQ13061 729 aa23.43■■□□□ 1.34
CLN6-222ENST00000637667 C16orf59Q7L2K0 433 aa23.43■■□□□ 1.34
CLN6-222ENST00000637667 FBXO11Q86XK2 927 aa23.43■■□□□ 1.34
CLN6-222ENST00000637667 SYTL5Q8TDW5 730 aaPredicted RBP23.43■■□□□ 1.34
CLN6-222ENST00000637667 TBC1D5Q92609 795 aa23.43■■□□□ 1.34
CLN6-222ENST00000637667 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.43■■□□□ 1.34
CLN6-222ENST00000637667 TRPV6Q9H1D0 765 aa23.43■■□□□ 1.34
CLN6-222ENST00000637667 A0A0C4DFX4 3053 aa23.43■■□□□ 1.34
CLN6-222ENST00000637667 CYP21A2P08686 494 aa23.42■■□□□ 1.34
CLN6-222ENST00000637667 TMEM240Q5SV17 173 aa23.42■■□□□ 1.34
CLN6-222ENST00000637667 MCF2L2Q86YR7 1114 aa23.42■■□□□ 1.34
CLN6-222ENST00000637667 STAG2Q8N3U4 1231 aa23.42■■□□□ 1.34
CLN6-222ENST00000637667 HIPK3Q9H422 1215 aa23.42■■□□□ 1.34
CLN6-222ENST00000637667 MRPL11Q9Y3B7 192 aaKnown RBP23.42■■□□□ 1.34
CLN6-222ENST00000637667 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.41■■□□□ 1.34
CLN6-222ENST00000637667 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.41■■□□□ 1.34
CLN6-222ENST00000637667 B4GALT4O60513 344 aa23.41■■□□□ 1.34
CLN6-222ENST00000637667 MYL3P08590 195 aa23.41■■□□□ 1.34
CLN6-222ENST00000637667 PURAQ00577 322 aaKnown RBP23.41■■□□□ 1.34
CLN6-222ENST00000637667 BRDTQ58F21 947 aaPredicted RBP23.41■■□□□ 1.34
CLN6-222ENST00000637667 CDX2Q99626 313 aaPredicted RBP23.41■■□□□ 1.34
CLN6-222ENST00000637667 TTYH1Q9H313 450 aaPredicted RBP23.41■■□□□ 1.34
CLN6-222ENST00000637667 COL20A1Q9P218 1284 aa23.41■■□□□ 1.34
CLN6-222ENST00000637667 KLRF2D3W0D1 207 aa23.4■■□□□ 1.34
CLN6-222ENST00000637667 SGSM2O43147 1006 aa23.4■■□□□ 1.34
CLN6-222ENST00000637667 ACRP10323 421 aa23.4■■□□□ 1.34
CLN6-222ENST00000637667 TXNP10599 105 aaKnown RBP23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms