RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 PIK3CAP42336 1068 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 DYNLL1P63167 89 aaKnown RBP10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 NFX1Q12986 1120 aaKnown RBP10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 TICAM2Q86XR7 235 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 GOLGA8CPA6NN73 597 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 VIMP08670 466 aaKnown RBP10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 PDE6CP51160 858 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 DIXDC1Q155Q3 683 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 ELF2Q15723 593 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 ERCC6LQ2NKX8 1250 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 CCDC68Q9H2F9 335 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 KCNH4Q9UQ05 1017 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 MYOM2P54296 1465 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 KIF24Q5T7B8 1368 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 ANXA13P27216 316 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 SUSD4Q5VX71 490 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 IQCDQ96DY2 449 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 SEC62Q99442 399 aaKnown RBP10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 GPBP1L1Q9HC44 474 aaPredicted RBP10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 METTL14Q9HCE5 456 aaKnown RBP10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 RAB20Q9NX57 234 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 POLIQ9UNA4 740 aa10.74□□□□□ -0.69
CLTCL1-211ENST00000621271 ECE2O60344 883 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 RNASE9P60153 205 aaKnown RBP10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 KRBA2Q6ZNG9 492 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 PPM1KQ8N3J5 372 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 NME8Q8N427 588 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 RSAD2Q8WXG1 361 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 FAM207AQ9NSI2 230 aaPredicted RBP10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 USP6P35125 1406 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 AATKQ6ZMQ8 1374 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 A0A0D9SFI3 127 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 RNF8O76064 485 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 SASH1O94885 1247 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 PSAPP07602 524 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 ABCD1P33897 745 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 MAN1A1P33908 653 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 RAET1EQ8TD07 263 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 SECISBP2LQ93073 1101 aaKnown RBP10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 TM6SF1Q9BZW5 370 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 FAM49AQ9H0Q0 323 aaPredicted RBP10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 NLRC4Q9NPP4 1024 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 NFE2L3Q9Y4A8 694 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 hCG_1984214I3L0E3 225 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 JAK2O60674 1132 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 ADD1P35611 737 aaKnown RBP10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 PPP2R3AQ06190 1150 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 SETDB1Q15047 1291 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 PDXDC2PQ6P474 469 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 FAM173BQ6P4H8 233 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 GBP6Q6ZN66 633 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 ZNF713Q8N859 430 aaPredicted RBP10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 GANCQ8TET4 914 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 SKA2Q8WVK7 121 aaPredicted RBP10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 MTIF3Q9H2K0 278 aaKnown RBP10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 ANTXR1Q9H6X2 564 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 KMT5AQ9NQR1 393 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 FEZ2Q9UHY8 353 aaPredicted RBP10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 CEP104O60308 925 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 ADALQ6DHV7 355 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 TMEM179Q6ZVK1 233 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 PEX26Q7Z412 305 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 CCDC105Q8IYK2 499 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 PARD3BQ8TEW8 1205 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 ATG3Q9NT62 314 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 IMPACTQ9P2X3 320 aa10.73□□□□□ -0.69
CLTCL1-211ENST00000621271 ADGRL3Q9HAR2 1447 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 FAM26FQ5R3K3 315 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 FAM149B1Q96BN6 582 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 LSM14BQ9BX40 385 aaKnown RBP10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 KIAA1024Q9UPX6 916 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 CARMIL3Q8ND23 1372 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 OVOS2A0A0G2JMS6 1433 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 OVOS2A0A0J9YW53 1432 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 OVOS2Q6IE36 1432 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 GCFC2P16383 781 aaKnown RBP10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 CRKP46108 304 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 MYSM1Q5VVJ2 828 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 RRAGAQ7L523 313 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 GPR101Q96P66 508 aaPredicted RBP10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 CPSF3Q9UKF6 684 aaKnown RBP10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 ZNF233A6NK53 670 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 RHOXF2BP0C7M4 288 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 RNF207Q6ZRF8 634 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 DAAM2Q86T65 1068 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 U2AF1L4Q8WU68 220 aaKnown RBP10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 RHOXF2Q9BQY4 288 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 SEPT10Q9P0V9 454 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 SERTAD1Q9UHV2 236 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 CFAP65Q6ZU64 1925 aaKnown RBP10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 A6NJR5 290 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 TSTA3Q13630 321 aaPredicted RBP10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 MTERF2Q49AM1 385 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 C8orf74Q6P047 294 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 GPIHBP1Q8IV16 184 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 TPCN1Q9ULQ1 816 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 TACC3Q9Y6A5 838 aa10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 SOS2Q07890 1332 aaPredicted RBP10.72□□□□□ -0.69
CLTCL1-211ENST00000621271 USP17L5A8MUK1 530 aa10.71□□□□□ -0.69
CLTCL1-211ENST00000621271 EIF2AK2P19525 551 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms