RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 PDIA5Q14554 519 aa31.52■■■□□ 2.64
CSPG5-205ENST00000610462 KIF18AQ8NI77 898 aa31.52■■■□□ 2.64
CSPG5-205ENST00000610462 RAB34Q9BZG1 259 aa31.52■■■□□ 2.64
CSPG5-205ENST00000610462 TTLL6Q8N841 843 aa31.51■■■□□ 2.63
CSPG5-205ENST00000610462 GMCL1P1Q8NEA9 526 aa31.51■■■□□ 2.63
CSPG5-205ENST00000610462 ANKRD20A12PQ8NF67 263 aa31.51■■■□□ 2.63
CSPG5-205ENST00000610462 ATF5Q9Y2D1 282 aaPredicted RBP31.51■■■□□ 2.63
CSPG5-205ENST00000610462 CCDC93Q567U6 631 aa31.5■■■□□ 2.63
CSPG5-205ENST00000610462 TCP11X2Q5H9J9 407 aa31.5■■■□□ 2.63
CSPG5-205ENST00000610462 AKR1B15C9JRZ8 316 aaPredicted RBP31.5■■■□□ 2.63
CSPG5-205ENST00000610462 GRB10Q13322 594 aa31.5■■■□□ 2.63
CSPG5-205ENST00000610462 CDC37Q16543 378 aaPredicted RBP31.5■■■□□ 2.63
CSPG5-205ENST00000610462 RTKN2Q8IZC4 609 aa31.5■■■□□ 2.63
CSPG5-205ENST00000610462 ITIH6Q6UXX5 1313 aa31.49■■■□□ 2.63
CSPG5-205ENST00000610462 KCNJ18B7U540 433 aa31.49■■■□□ 2.63
CSPG5-205ENST00000610462 F5H6K3 240 aa31.49■■■□□ 2.63
CSPG5-205ENST00000610462 KLRC3Q07444 240 aa31.49■■■□□ 2.63
CSPG5-205ENST00000610462 KCNJ12Q14500 433 aa31.49■■■□□ 2.63
CSPG5-205ENST00000610462 RSBN1LQ6PCB5 846 aaPredicted RBP31.49■■■□□ 2.63
CSPG5-205ENST00000610462 PPFIBP1Q86W92 1011 aa31.49■■■□□ 2.63
CSPG5-205ENST00000610462 GMCL1Q96IK5 515 aa31.49■■■□□ 2.63
CSPG5-205ENST00000610462 GTPBP4Q9BZE4 634 aaKnown RBP31.49■■■□□ 2.63
CSPG5-205ENST00000610462 STK17AQ9UEE5 414 aa31.49■■■□□ 2.63
CSPG5-205ENST00000610462 GCFC2P16383 781 aaKnown RBP31.48■■■□□ 2.63
CSPG5-205ENST00000610462 COPB1P53618 953 aaKnown RBP31.48■■■□□ 2.63
CSPG5-205ENST00000610462 RBM26Q5T8P6 1007 aaKnown RBP31.48■■■□□ 2.63
CSPG5-205ENST00000610462 PANX2Q96RD6 677 aa31.48■■■□□ 2.63
CSPG5-205ENST00000610462 MAP7D2Q96T17 732 aa31.48■■■□□ 2.63
CSPG5-205ENST00000610462 NAP1L4Q99733 375 aaKnown RBP31.48■■■□□ 2.63
CSPG5-205ENST00000610462 DDX25Q9UHL0 483 aaKnown RBP31.48■■■□□ 2.63
CSPG5-205ENST00000610462 PCDHA1Q9Y5I3 950 aa31.48■■■□□ 2.63
CSPG5-205ENST00000610462 PSMA7O14818 248 aa31.48■■■□□ 2.63
CSPG5-205ENST00000610462 CCT6AP40227 531 aaKnown RBP31.48■■■□□ 2.63
CSPG5-205ENST00000610462 PNMA5Q96PV4 448 aa31.48■■■□□ 2.63
CSPG5-205ENST00000610462 CSRNP1Q96S65 589 aa31.48■■■□□ 2.63
CSPG5-205ENST00000610462 PSMD1Q99460 953 aa31.48■■■□□ 2.63
CSPG5-205ENST00000610462 EXOC1Q9NV70 894 aa31.48■■■□□ 2.63
CSPG5-205ENST00000610462 N4BP3O15049 544 aa31.47■■■□□ 2.63
CSPG5-205ENST00000610462 ZSCAN12O43309 604 aa31.47■■■□□ 2.63
CSPG5-205ENST00000610462 ASIC1P78348 528 aa31.47■■■□□ 2.63
CSPG5-205ENST00000610462 DHTKD1Q96HY7 919 aaPredicted RBP31.47■■■□□ 2.63
CSPG5-205ENST00000610462 PDGFDQ9GZP0 370 aaPredicted RBP31.47■■■□□ 2.63
CSPG5-205ENST00000610462 TRIM49BA6NDI0 452 aa31.47■■■□□ 2.63
CSPG5-205ENST00000610462 RBL2Q08999 1139 aa31.47■■■□□ 2.63
CSPG5-205ENST00000610462 SV2BQ7L1I2 683 aa31.47■■■□□ 2.63
CSPG5-205ENST00000610462 REXO1L1PQ8IX06 675 aa31.47■■■□□ 2.63
CSPG5-205ENST00000610462 BLOC1S4Q9NUP1 217 aa31.47■■■□□ 2.63
CSPG5-205ENST00000610462 TMOD2Q9NZR1 351 aa31.47■■■□□ 2.63
CSPG5-205ENST00000610462 GH2P01242 217 aa31.46■■■□□ 2.63
CSPG5-205ENST00000610462 PDE4DQ08499 809 aa31.46■■■□□ 2.63
CSPG5-205ENST00000610462 SPDYE2BA6NHP3 402 aa31.45■■■□□ 2.63
CSPG5-205ENST00000610462 NDUFB10O96000 172 aa31.45■■■□□ 2.63
CSPG5-205ENST00000610462 SPDYE6P0CI01 402 aa31.45■■■□□ 2.63
CSPG5-205ENST00000610462 JAG1P78504 1218 aa31.45■■■□□ 2.63
CSPG5-205ENST00000610462 CDK5RAP3Q96JB5 506 aa31.45■■■□□ 2.63
CSPG5-205ENST00000610462 VPS16Q9H269 839 aa31.45■■■□□ 2.63
CSPG5-205ENST00000610462 THAP9Q9H5L6 903 aa31.45■■■□□ 2.63
CSPG5-205ENST00000610462 TAB2Q9NYJ8 693 aa31.45■■■□□ 2.63
CSPG5-205ENST00000610462 HERC5Q9UII4 1024 aaKnown RBP31.45■■■□□ 2.63
CSPG5-205ENST00000610462 PPP1R2P41236 205 aa31.45■■■□□ 2.62
CSPG5-205ENST00000610462 PMS1P54277 932 aaKnown RBP31.45■■■□□ 2.62
CSPG5-205ENST00000610462 IRF2BP1Q8IU81 584 aa31.45■■■□□ 2.62
CSPG5-205ENST00000610462 PPP2R2CQ9Y2T4 447 aa31.45■■■□□ 2.62
CSPG5-205ENST00000610462 POTEMA6NI47 508 aa31.44■■■□□ 2.62
CSPG5-205ENST00000610462 VIL1P09327 827 aaKnown RBP31.44■■■□□ 2.62
CSPG5-205ENST00000610462 RRP1BQ14684 758 aaKnown RBP31.44■■■□□ 2.62
CSPG5-205ENST00000610462 KRT79Q5XKE5 535 aa31.44■■■□□ 2.62
CSPG5-205ENST00000610462 HAS1Q92839 578 aa31.44■■■□□ 2.62
CSPG5-205ENST00000610462 GMLQ99445 158 aa31.44■■■□□ 2.62
CSPG5-205ENST00000610462 USP17L15C9J2P7 530 aa31.44■■■□□ 2.62
CSPG5-205ENST00000610462 USP17L13C9JLJ4 530 aa31.44■■■□□ 2.62
CSPG5-205ENST00000610462 USP17L11C9JVI0 530 aa31.44■■■□□ 2.62
CSPG5-205ENST00000610462 USP17L18D6R9N7 530 aa31.44■■■□□ 2.62
CSPG5-205ENST00000610462 USP17L22D6RA61 530 aa31.44■■■□□ 2.62
CSPG5-205ENST00000610462 USP17L17D6RBQ6 530 aa31.44■■■□□ 2.62
CSPG5-205ENST00000610462 USP17L19D6RCP7 530 aa31.44■■■□□ 2.62
CSPG5-205ENST00000610462 USP17L20D6RJB6 530 aa31.44■■■□□ 2.62
CSPG5-205ENST00000610462 USP17L24Q0WX57 530 aa31.44■■■□□ 2.62
CSPG5-205ENST00000610462 USP17L6PQ6QN14 398 aa31.44■■■□□ 2.62
CSPG5-205ENST00000610462 SNX29Q8TEQ0 813 aa31.44■■■□□ 2.62
CSPG5-205ENST00000610462 NOC3LQ8WTT2 800 aaKnown RBP31.44■■■□□ 2.62
CSPG5-205ENST00000610462 UBE2Q2Q8WVN8 375 aa31.44■■■□□ 2.62
CSPG5-205ENST00000610462 HDAC9Q9UKV0 1011 aa31.44■■■□□ 2.62
CSPG5-205ENST00000610462 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP31.44■■■□□ 2.62
CSPG5-205ENST00000610462 TTI2Q6NXR4 508 aa31.43■■■□□ 2.62
CSPG5-205ENST00000610462 SYT10Q6XYQ8 523 aa31.43■■■□□ 2.62
CSPG5-205ENST00000610462 MTERF4Q7Z6M4 381 aaKnown RBP31.43■■■□□ 2.62
CSPG5-205ENST00000610462 ZNF710Q8N1W2 664 aa31.43■■■□□ 2.62
CSPG5-205ENST00000610462 LARP4BQ92615 738 aaKnown RBP31.43■■■□□ 2.62
CSPG5-205ENST00000610462 TRIM47Q96LD4 638 aa31.43■■■□□ 2.62
CSPG5-205ENST00000610462 NUP88Q99567 741 aaPredicted RBP31.43■■■□□ 2.62
CSPG5-205ENST00000610462 SYNPO2Q9UMS6 1093 aa31.43■■■□□ 2.62
CSPG5-205ENST00000610462 TCP10L2B9ZVM9 353 aa31.42■■■□□ 2.62
CSPG5-205ENST00000610462 PSMD14O00487 310 aa31.42■■■□□ 2.62
CSPG5-205ENST00000610462 RAD17O75943 681 aa31.42■■■□□ 2.62
CSPG5-205ENST00000610462 SYCP1Q15431 976 aa31.42■■■□□ 2.62
CSPG5-205ENST00000610462 COBLL1Q53SF7 1204 aa31.42■■■□□ 2.62
CSPG5-205ENST00000610462 SYDE2Q5VT97 1194 aa31.42■■■□□ 2.62
CSPG5-205ENST00000610462 LARGE2Q8N3Y3 721 aa31.42■■■□□ 2.62
CSPG5-205ENST00000610462 AMNQ9BXJ7 453 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 239.3 ms