RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 XDHP47989 1333 aa9.48□□□□□ -0.89
VMP1-213ENST00000591877 RASSF10A6NK89 507 aa9.47□□□□□ -0.89
VMP1-213ENST00000591877 VIL1P09327 827 aaKnown RBP9.47□□□□□ -0.89
VMP1-213ENST00000591877 HSPA1AP0DMV8 641 aaKnown RBP9.47□□□□□ -0.89
VMP1-213ENST00000591877 HSPA1BP0DMV9 641 aaKnown RBP9.47□□□□□ -0.89
VMP1-213ENST00000591877 RLBP1P12271 317 aa9.47□□□□□ -0.89
VMP1-213ENST00000591877 TXKP42681 527 aa9.47□□□□□ -0.89
VMP1-213ENST00000591877 IREB2P48200 963 aaKnown RBP9.47□□□□□ -0.89
VMP1-213ENST00000591877 AFF1P51825 1210 aaKnown RBP9.47□□□□□ -0.89
VMP1-213ENST00000591877 FOXO4P98177 505 aa9.47□□□□□ -0.89
VMP1-213ENST00000591877 RASGRP4Q8TDF6 673 aa9.47□□□□□ -0.89
VMP1-213ENST00000591877 WFDC12Q8WWY7 111 aa9.47□□□□□ -0.89
VMP1-213ENST00000591877 DPF2Q92785 391 aa9.47□□□□□ -0.89
VMP1-213ENST00000591877 CDC5LQ99459 802 aaKnown RBP9.47□□□□□ -0.89
VMP1-213ENST00000591877 EHD4Q9H223 541 aa9.47□□□□□ -0.89
VMP1-213ENST00000591877 SALL4Q9UJQ4 1053 aa9.47□□□□□ -0.89
VMP1-213ENST00000591877 KIF4AO95239 1232 aa9.46□□□□□ -0.9
VMP1-213ENST00000591877 MAP3K6O95382 1288 aa9.46□□□□□ -0.9
VMP1-213ENST00000591877 RBL2Q08999 1139 aa9.46□□□□□ -0.9
VMP1-213ENST00000591877 EPHA10Q5JZY3 1008 aa9.46□□□□□ -0.9
VMP1-213ENST00000591877 COL13A1Q5TAT6 717 aaPredicted RBP9.46□□□□□ -0.9
VMP1-213ENST00000591877 PEAR1Q5VY43 1037 aaPredicted RBP9.46□□□□□ -0.9
VMP1-213ENST00000591877 PSAPL1Q6NUJ1 521 aa9.46□□□□□ -0.9
VMP1-213ENST00000591877 DLK2Q6UY11 383 aa9.46□□□□□ -0.9
VMP1-213ENST00000591877 NOP9Q86U38 636 aaKnown RBP9.46□□□□□ -0.9
VMP1-213ENST00000591877 GLIS2Q9BZE0 524 aaPredicted RBP9.46□□□□□ -0.9
VMP1-213ENST00000591877 TTF2Q9UNY4 1162 aaKnown RBP9.46□□□□□ -0.9
VMP1-213ENST00000591877 THSD7BQ9C0I4 1608 aa9.45□□□□□ -0.9
VMP1-213ENST00000591877 H7C1D1 291 aa9.45□□□□□ -0.9
VMP1-213ENST00000591877 MMP20O60882 483 aa9.45□□□□□ -0.9
VMP1-213ENST00000591877 SASH3O75995 380 aa9.45□□□□□ -0.9
VMP1-213ENST00000591877 FGRP09769 529 aa9.45□□□□□ -0.9
VMP1-213ENST00000591877 RPS12P25398 132 aaKnown RBP9.45□□□□□ -0.9
VMP1-213ENST00000591877 SSTR4P31391 388 aa9.45□□□□□ -0.9
VMP1-213ENST00000591877 GTF2F1P35269 517 aaKnown RBP eCLIP9.45□□□□□ -0.9
VMP1-213ENST00000591877 CCT4P50991 539 aaKnown RBP9.45□□□□□ -0.9
VMP1-213ENST00000591877 SLFN5Q08AF3 891 aa9.45□□□□□ -0.9
VMP1-213ENST00000591877 DEFB115Q30KQ5 88 aa9.45□□□□□ -0.9
VMP1-213ENST00000591877 TBC1D10BQ4KMP7 808 aaPredicted RBP9.45□□□□□ -0.9
VMP1-213ENST00000591877 GPRASP2Q96D09 838 aa9.45□□□□□ -0.9
VMP1-213ENST00000591877 MED23Q9ULK4 1368 aa9.45□□□□□ -0.9
VMP1-213ENST00000591877 ZNF609O15014 1411 aa9.45□□□□□ -0.9
VMP1-213ENST00000591877 SNAP23O00161 211 aa9.44□□□□□ -0.9
VMP1-213ENST00000591877 GRM8O00222 908 aa9.44□□□□□ -0.9
VMP1-213ENST00000591877 RARAP10276 462 aa9.44□□□□□ -0.9
VMP1-213ENST00000591877 ATF4P18848 351 aaPredicted RBP9.44□□□□□ -0.9
VMP1-213ENST00000591877 KLRK1P26718 216 aa9.44□□□□□ -0.9
VMP1-213ENST00000591877 NOS3P29474 1203 aa9.44□□□□□ -0.9
VMP1-213ENST00000591877 IGHMBP2P38935 993 aaKnown RBP9.44□□□□□ -0.9
VMP1-213ENST00000591877 PAK2Q13177 524 aa9.44□□□□□ -0.9
VMP1-213ENST00000591877 SV2BQ7L1I2 683 aa9.44□□□□□ -0.9
VMP1-213ENST00000591877 DHX38Q92620 1227 aaKnown RBP9.44□□□□□ -0.9
VMP1-213ENST00000591877 KAZALD1Q96I82 304 aa9.44□□□□□ -0.9
VMP1-213ENST00000591877 DNAJC2Q99543 621 aaKnown RBP9.44□□□□□ -0.9
VMP1-213ENST00000591877 KBTBD4Q9NVX7 518 aa9.44□□□□□ -0.9
VMP1-213ENST00000591877 ABT1Q9ULW3 272 aaKnown RBP9.44□□□□□ -0.9
VMP1-213ENST00000591877 IRS2Q9Y4H2 1338 aa9.44□□□□□ -0.9
VMP1-213ENST00000591877 ZNF804BA4D1E1 1349 aa9.43□□□□□ -0.9
VMP1-213ENST00000591877 ASTN2O75129 1339 aaPredicted RBP9.43□□□□□ -0.9
VMP1-213ENST00000591877 WDR33Q9C0J8 1336 aaKnown RBP9.43□□□□□ -0.9
VMP1-213ENST00000591877 TMEM238LA0A1B0GVL6 79 aa9.43□□□□□ -0.9
VMP1-213ENST00000591877 FOXN1O15353 648 aa9.43□□□□□ -0.9
VMP1-213ENST00000591877 ALDH1L1O75891 902 aa9.43□□□□□ -0.9
VMP1-213ENST00000591877 CYP2E1P05181 493 aaPredicted RBP9.43□□□□□ -0.9
VMP1-213ENST00000591877 PSAPP07602 524 aa9.43□□□□□ -0.9
VMP1-213ENST00000591877 ZNF280AP59817 542 aaPredicted RBP9.43□□□□□ -0.9
VMP1-213ENST00000591877 CHRNDQ07001 517 aa9.43□□□□□ -0.9
VMP1-213ENST00000591877 LMBR1LQ6UX01 489 aa9.43□□□□□ -0.9
VMP1-213ENST00000591877 CDC37L1Q7L3B6 337 aa9.43□□□□□ -0.9
VMP1-213ENST00000591877 MCF2L2Q86YR7 1114 aa9.43□□□□□ -0.9
VMP1-213ENST00000591877 TRMT2AQ8IZ69 625 aaKnown RBP9.43□□□□□ -0.9
VMP1-213ENST00000591877 SSH1Q8WYL5 1049 aa9.43□□□□□ -0.9
VMP1-213ENST00000591877 SEC16BQ96JE7 1060 aa9.43□□□□□ -0.9
VMP1-213ENST00000591877 MXD3Q9BW11 206 aa9.43□□□□□ -0.9
VMP1-213ENST00000591877 KRTAP4-7Q9BYR0 210 aa9.43□□□□□ -0.9
VMP1-213ENST00000591877 LNPKQ9C0E8 428 aa9.43□□□□□ -0.9
VMP1-213ENST00000591877 ABCB6Q9NP58 842 aa9.43□□□□□ -0.9
VMP1-213ENST00000591877 TLR7Q9NYK1 1049 aaKnown RBP9.43□□□□□ -0.9
VMP1-213ENST00000591877 LEMD3Q9Y2U8 911 aa9.43□□□□□ -0.9
VMP1-213ENST00000591877 UTYO14607 1347 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 ANKRD18BA2A2Z9 1011 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 CCER2I3L3R5 266 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 SMARCA5O60264 1052 aaPredicted RBP9.42□□□□□ -0.9
VMP1-213ENST00000591877 TAF5LO75529 589 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 CELF2O95319 508 aaKnown RBP9.42□□□□□ -0.9
VMP1-213ENST00000591877 NBPF7P0C2Y1 421 aaPredicted RBP9.42□□□□□ -0.9
VMP1-213ENST00000591877 TARSP26639 723 aaKnown RBP9.42□□□□□ -0.9
VMP1-213ENST00000591877 HYAL2Q12891 473 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 CCDC85BQ15834 202 aaPredicted RBP9.42□□□□□ -0.9
VMP1-213ENST00000591877 KIF4BQ2VIQ3 1234 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 DACT2Q5SW24 774 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 LCE1DQ5T752 114 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 CYP4F22Q6NT55 531 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 SLC4A10Q6U841 1118 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 SAPCD2Q86UD0 394 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 CCNJLQ8IV13 435 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 AGBL3Q8NEM8 1001 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 SUCLG2Q96I99 432 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 MEGF10Q96KG7 1140 aa9.42□□□□□ -0.9
VMP1-213ENST00000591877 PNMA5Q96PV4 448 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms