RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 PDE2AO00408 941 aaPredicted RBP11.71□□□□□ -0.54
RNF43-207ENST00000583753 ABCB4P21439 1286 aa11.71□□□□□ -0.54
RNF43-207ENST00000583753 PRDX5P30044 214 aa11.71□□□□□ -0.54
RNF43-207ENST00000583753 CTNNA1P35221 906 aaKnown RBP11.71□□□□□ -0.54
RNF43-207ENST00000583753 ARHGAP25P42331 645 aa11.71□□□□□ -0.54
RNF43-207ENST00000583753 HERVK_113P62684 666 aa11.71□□□□□ -0.54
RNF43-207ENST00000583753 USP17L2Q6R6M4 530 aa11.71□□□□□ -0.54
RNF43-207ENST00000583753 B4GALNT4Q76KP1 1039 aa11.71□□□□□ -0.54
RNF43-207ENST00000583753 OR2W6PQ8NHA6 318 aa11.71□□□□□ -0.54
RNF43-207ENST00000583753 TBC1D31Q96DN5 1066 aa11.71□□□□□ -0.54
RNF43-207ENST00000583753 LIMA1Q9UHB6 759 aaKnown RBP11.71□□□□□ -0.54
RNF43-207ENST00000583753 KLRF2D3W0D1 207 aa11.71□□□□□ -0.54
RNF43-207ENST00000583753 TULP2O00295 520 aa11.71□□□□□ -0.54
RNF43-207ENST00000583753 EEF1GP26641 437 aaKnown RBP11.71□□□□□ -0.54
RNF43-207ENST00000583753 LONP1P36776 959 aaKnown RBP11.71□□□□□ -0.54
RNF43-207ENST00000583753 PAK2Q13177 524 aa11.71□□□□□ -0.54
RNF43-207ENST00000583753 NONOQ15233 471 aaKnown RBP eCLIP11.71□□□□□ -0.54
RNF43-207ENST00000583753 TXNRD1Q16881 649 aa11.71□□□□□ -0.54
RNF43-207ENST00000583753 ADGRA1Q86SQ6 560 aa11.71□□□□□ -0.54
RNF43-207ENST00000583753 ZSCAN29Q8IWY8 852 aaPredicted RBP11.71□□□□□ -0.54
RNF43-207ENST00000583753 GPR101Q96P66 508 aaPredicted RBP11.71□□□□□ -0.54
RNF43-207ENST00000583753 RAB34Q9BZG1 259 aa11.71□□□□□ -0.54
RNF43-207ENST00000583753 BAIAP2L1Q9UHR4 511 aa11.71□□□□□ -0.54
RNF43-207ENST00000583753 RCCD1A6NED2 376 aa11.7□□□□□ -0.54
RNF43-207ENST00000583753 ATP2C1P98194 919 aaPredicted RBP11.7□□□□□ -0.54
RNF43-207ENST00000583753 DIXDC1Q155Q3 683 aa11.7□□□□□ -0.54
RNF43-207ENST00000583753 SFMBT2Q5VUG0 894 aa11.7□□□□□ -0.54
RNF43-207ENST00000583753 HNRNPLLQ8WVV9 542 aaKnown RBP11.7□□□□□ -0.54
RNF43-207ENST00000583753 RPGRIP1Q96KN7 1286 aa11.7□□□□□ -0.54
RNF43-207ENST00000583753 OSBPL9Q96SU4 736 aa11.7□□□□□ -0.54
RNF43-207ENST00000583753 TCP1P17987 556 aaKnown RBP11.7□□□□□ -0.54
RNF43-207ENST00000583753 TNNC1P63316 161 aa11.7□□□□□ -0.54
RNF43-207ENST00000583753 CDKAL1Q5VV42 579 aa11.7□□□□□ -0.54
RNF43-207ENST00000583753 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.7□□□□□ -0.54
RNF43-207ENST00000583753 FAM133AQ8N9E0 248 aa11.7□□□□□ -0.54
RNF43-207ENST00000583753 MGARPQ8TDB4 240 aa11.7□□□□□ -0.54
RNF43-207ENST00000583753 PHF20Q9BVI0 1012 aa11.7□□□□□ -0.54
RNF43-207ENST00000583753 STIM2Q9P246 746 aa11.7□□□□□ -0.54
RNF43-207ENST00000583753 FBXO3Q9UK99 471 aa11.7□□□□□ -0.54
RNF43-207ENST00000583753 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.7□□□□□ -0.541e-6■■□□□ 13.6
RNF43-207ENST00000583753 GOLGA8KD6RF30 607 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 VIMP08670 466 aaKnown RBP11.69□□□□□ -0.54
RNF43-207ENST00000583753 OR52Z1P0C646 297 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 CARSP49589 748 aaKnown RBP11.69□□□□□ -0.54
RNF43-207ENST00000583753 MAP2K1Q02750 393 aaPredicted RBP11.69□□□□□ -0.54
RNF43-207ENST00000583753 NAA25Q14CX7 972 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 DAAM2Q86T65 1068 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 NBPF5PQ86XG9 351 aaPredicted RBP11.69□□□□□ -0.54
RNF43-207ENST00000583753 COA7Q96BR5 231 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 NDST4Q9H3R1 872 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 PSD3Q9NYI0 1048 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 TACC3Q9Y6A5 838 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 WDR19Q8NEZ3 1342 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 XRN1Q8IZH2 1706 aaKnown RBP11.69□□□□□ -0.54
RNF43-207ENST00000583753 GCOM1H8Y6P7 765 aaPredicted RBP11.69□□□□□ -0.54
RNF43-207ENST00000583753 MYZAPP0CAP1 466 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 CCNE1P24864 410 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 HIBADHP31937 336 aaKnown RBP11.69□□□□□ -0.54
RNF43-207ENST00000583753 ZNF76P36508 570 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 SLC1A4P43007 532 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 IFNAR2P48551 515 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 EPHB4P54760 987 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 RPS6KA1Q15418 735 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 CALCRLQ16602 461 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 MMS22LQ6ZRQ5 1243 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 DDX42Q86XP3 938 aaKnown RBP eCLIP11.69□□□□□ -0.54
RNF43-207ENST00000583753 POTEDQ86YR6 584 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 RBM12Q9NTZ6 932 aaKnown RBP11.69□□□□□ -0.54
RNF43-207ENST00000583753 FAM53CQ9NYF3 392 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 POTEMA6NI47 508 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 PALMO75781 387 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 SSR1P43307 286 aaKnown RBP11.69□□□□□ -0.54
RNF43-207ENST00000583753 CORO7P57737 925 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 MSL1Q68DK7 614 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 TRAPPC11Q7Z392 1133 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 CTNNBL1Q8WYA6 563 aaPredicted RBP11.69□□□□□ -0.54
RNF43-207ENST00000583753 PAIP2Q9BPZ3 127 aaKnown RBP11.69□□□□□ -0.54
RNF43-207ENST00000583753 RAB21Q9UL25 225 aa11.69□□□□□ -0.54
RNF43-207ENST00000583753 NR1D1P20393 614 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 LRP10Q7Z4F1 713 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 MYCBPQ99417 103 aaPredicted RBP11.68□□□□□ -0.54
RNF43-207ENST00000583753 TACO1Q9BSH4 297 aaKnown RBP11.68□□□□□ -0.54
RNF43-207ENST00000583753 MEGF6O75095 1541 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 JCADQ9P266 1359 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 GNAQP50148 359 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 ADCY1Q08828 1119 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 MKRN4PQ13434 485 aaPredicted RBP11.68□□□□□ -0.54
RNF43-207ENST00000583753 SF3B2Q13435 895 aaKnown RBP11.68□□□□□ -0.54
RNF43-207ENST00000583753 PKN1Q16512 942 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 ADSSL1Q8N142 457 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 LRRC47Q8N1G4 583 aaKnown RBP11.68□□□□□ -0.54
RNF43-207ENST00000583753 RDH13Q8NBN7 331 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 TBCKQ8TEA7 893 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 TMEM260Q9NX78 707 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 CAPN11Q9UMQ6 739 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 PCDHA4Q9UN74 947 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 ZNF652Q9Y2D9 606 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 EIF4E1BA6NMX2 242 aaKnown RBP11.68□□□□□ -0.54
RNF43-207ENST00000583753 SEMA3EO15041 775 aa11.68□□□□□ -0.54
RNF43-207ENST00000583753 SYF2O95926 243 aaKnown RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 198.5 ms