RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 PPP4R3CPQ6ZMV5 832 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 MIER3Q7Z3K6 550 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 MAP7D3Q8IWC1 876 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 NSMCE1Q8WV22 266 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 LARP4BQ92615 738 aaKnown RBP11.72□□□□□ -0.53
SEC22B-201ENST00000578049 CLIC6Q96NY7 704 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 DRC3Q9H069 523 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 CCDC87Q9NVE4 849 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 UFL1O94874 794 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 GARSP41250 739 aaKnown RBP11.72□□□□□ -0.53
SEC22B-201ENST00000578049 C6orf118Q5T5N4 469 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 ZNF579Q8NAF0 562 aaKnown RBP11.72□□□□□ -0.53
SEC22B-201ENST00000578049 IL17REQ8NFR9 667 aa11.72□□□□□ -0.53
SEC22B-201ENST00000578049 MORC2Q9Y6X9 1032 aaPredicted RBP11.72□□□□□ -0.53
SEC22B-201ENST00000578049 WDR19Q8NEZ3 1342 aa11.71□□□□□ -0.53
SEC22B-201ENST00000578049 MGEA5O60502 916 aa11.71□□□□□ -0.53
SEC22B-201ENST00000578049 LRRC63Q05C16 580 aa11.71□□□□□ -0.53
SEC22B-201ENST00000578049 NECTIN1Q15223 517 aa11.71□□□□□ -0.53
SEC22B-201ENST00000578049 ZBTB9Q96C00 473 aa11.71□□□□□ -0.53
SEC22B-201ENST00000578049 MYO1FO00160 1098 aa11.71□□□□□ -0.53
SEC22B-201ENST00000578049 NSFP46459 744 aaKnown RBP11.71□□□□□ -0.53
SEC22B-201ENST00000578049 RAD51AP2Q09MP3 1159 aa11.71□□□□□ -0.53
SEC22B-201ENST00000578049 ASPHQ12797 758 aa11.71□□□□□ -0.53
SEC22B-201ENST00000578049 ZBTB38Q8NAP3 1195 aaPredicted RBP11.71□□□□□ -0.53
SEC22B-201ENST00000578049 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.71□□□□□ -0.53
SEC22B-201ENST00000578049 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.71□□□□□ -0.53
SEC22B-201ENST00000578049 MAN1B1Q9UKM7 699 aa11.71□□□□□ -0.53
SEC22B-201ENST00000578049 MFAP3LO75121 409 aa11.71□□□□□ -0.53
SEC22B-201ENST00000578049 MMP1P03956 469 aa11.71□□□□□ -0.53
SEC22B-201ENST00000578049 DEUP1Q05D60 604 aa11.71□□□□□ -0.53
SEC22B-201ENST00000578049 BFSP1Q12934 665 aa11.71□□□□□ -0.53
SEC22B-201ENST00000578049 NLRX1Q86UT6 975 aa11.71□□□□□ -0.53
SEC22B-201ENST00000578049 NOP53Q9NZM5 478 aaKnown RBP11.71□□□□□ -0.53
SEC22B-201ENST00000578049 KLRF2D3W0D1 207 aa11.71□□□□□ -0.54
SEC22B-201ENST00000578049 HGSO14964 777 aaPredicted RBP11.71□□□□□ -0.54
SEC22B-201ENST00000578049 PPFIA2O75334 1257 aa11.71□□□□□ -0.54
SEC22B-201ENST00000578049 GUCY2CP25092 1073 aa11.71□□□□□ -0.54
SEC22B-201ENST00000578049 CARD10Q9BWT7 1032 aa11.71□□□□□ -0.54
SEC22B-201ENST00000578049 DBNLQ9UJU6 430 aaKnown RBP11.71□□□□□ -0.54
SEC22B-201ENST00000578049 RASSF7Q02833 373 aa11.71□□□□□ -0.54
SEC22B-201ENST00000578049 CC2D1AQ6P1N0 951 aaPredicted RBP11.71□□□□□ -0.54
SEC22B-201ENST00000578049 CASC4Q6P4E1 433 aa11.71□□□□□ -0.54
SEC22B-201ENST00000578049 PSTPIP2Q9H939 334 aa11.71□□□□□ -0.54
SEC22B-201ENST00000578049 FAF1Q9UNN5 650 aaPredicted RBP11.71□□□□□ -0.54
SEC22B-201ENST00000578049 SMIM24O75264 130 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 KCNA6P17658 529 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 GPATCH4Q5T3I0 446 aaKnown RBP11.7□□□□□ -0.54
SEC22B-201ENST00000578049 TRIM68Q6AZZ1 485 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 TBC1D7Q9P0N9 293 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 SAP30BPQ9UHR5 308 aaKnown RBP11.7□□□□□ -0.54
SEC22B-201ENST00000578049 ERVK-7P63135 1459 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 SAMD9Q5K651 1589 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 ECEL1O95672 775 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 MFAP3P55082 362 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 PSMD6Q15008 389 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 EDC3Q96F86 508 aaKnown RBP11.7□□□□□ -0.54
SEC22B-201ENST00000578049 SERPING1P05155 500 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 NR1H3Q13133 447 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 KCTD16Q68DU8 428 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 CSRNP1Q96S65 589 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 EFHD1Q9BUP0 239 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 MID2Q9UJV3 735 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.7□□□□□ -0.54
SEC22B-201ENST00000578049 PRPF6O94906 941 aaKnown RBP11.7□□□□□ -0.54
SEC22B-201ENST00000578049 PTK2Q05397 1052 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 ANKRD20A4Q4UJ75 823 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 BRDTQ58F21 947 aaPredicted RBP11.7□□□□□ -0.54
SEC22B-201ENST00000578049 ANKRD20A8PQ5CZ79 823 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 ANKRD20A2Q5SQ80 823 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 ANKRD20A1Q5TYW2 823 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 PHF23Q9BUL5 403 aaPredicted RBP11.7□□□□□ -0.54
SEC22B-201ENST00000578049 ABCB6Q9NP58 842 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 IPO5O00410 1097 aaKnown RBP11.7□□□□□ -0.54
SEC22B-201ENST00000578049 RNF8O76064 485 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 TNNI1P19237 187 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 DHX9Q08211 1270 aaKnown RBP11.7□□□□□ -0.54
SEC22B-201ENST00000578049 ANGPTL2Q9UKU9 493 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 PCDHA4Q9UN74 947 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 ZBED4O75132 1171 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 AFPP02771 609 aaKnown RBP11.7□□□□□ -0.54
SEC22B-201ENST00000578049 TECP42680 631 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 POLA2Q14181 598 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 JDP2Q8WYK2 163 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 ALDH8A1Q9H2A2 487 aaPredicted RBP11.7□□□□□ -0.54
SEC22B-201ENST00000578049 ZNF148Q9UQR1 794 aa11.7□□□□□ -0.54
SEC22B-201ENST00000578049 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.7□□□□□ -0.54
SEC22B-201ENST00000578049 ESRRGP62508 458 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 IRX5P78411 483 aaPredicted RBP11.69□□□□□ -0.54
SEC22B-201ENST00000578049 PLA2G4DQ86XP0 818 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 TCP11Q8WWU5 503 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 AZI2Q9H6S1 392 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 A1BGP04217 495 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 RPS6KA2Q15349 733 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 MXD3Q9BW11 206 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 YEATS2Q9ULM3 1422 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 PODXLO00592 558 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 PDE8BO95263 885 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 INHBAP08476 426 aa11.69□□□□□ -0.54
SEC22B-201ENST00000578049 RPS8P62241 208 aaKnown RBP11.69□□□□□ -0.54
SEC22B-201ENST00000578049 CCDC17Q96LX7 622 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms