RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 PFKFB3Q16875 520 aaPredicted RBP17.59■□□□□ 0.41
EDC3-206ENST00000563009 WWC2Q6AWC2 1192 aa17.59■□□□□ 0.41
EDC3-206ENST00000563009 MSL3Q8N5Y2 521 aaKnown RBP17.59■□□□□ 0.41
EDC3-206ENST00000563009 ZNF713Q8N859 430 aaPredicted RBP17.59■□□□□ 0.41
EDC3-206ENST00000563009 NECAB1Q8N987 351 aa17.59■□□□□ 0.41
EDC3-206ENST00000563009 SH3TC2Q8TF17 1288 aa17.59■□□□□ 0.41
EDC3-206ENST00000563009 TBC1D5Q92609 795 aa17.59■□□□□ 0.41
EDC3-206ENST00000563009 ZSCAN31Q96LW9 406 aaPredicted RBP17.59■□□□□ 0.41
EDC3-206ENST00000563009 MAP3K20Q9NYL2 800 aaKnown RBP17.59■□□□□ 0.41
EDC3-206ENST00000563009 ASTN1O14525 1302 aa17.58■□□□□ 0.4
EDC3-206ENST00000563009 PTPDC1A2A3K4 754 aa17.58■□□□□ 0.4
EDC3-206ENST00000563009 SOWAHBA6NEL2 793 aa17.58■□□□□ 0.4
EDC3-206ENST00000563009 CDKL5O76039 1030 aa17.58■□□□□ 0.4
EDC3-206ENST00000563009 SCG2P13521 617 aa17.58■□□□□ 0.4
EDC3-206ENST00000563009 ST3GAL1Q11201 340 aa17.58■□□□□ 0.4
EDC3-206ENST00000563009 MAMDC4Q6UXC1 1216 aa17.58■□□□□ 0.4
EDC3-206ENST00000563009 HEATR3Q7Z4Q2 680 aa17.58■□□□□ 0.4
EDC3-206ENST00000563009 TNS4Q8IZW8 715 aa17.58■□□□□ 0.4
EDC3-206ENST00000563009 GPKOWQ92917 476 aaPredicted RBP eCLIP17.58■□□□□ 0.4
EDC3-206ENST00000563009 ZNF333Q96JL9 665 aa17.58■□□□□ 0.4
EDC3-206ENST00000563009 SLC26A6Q9BXS9 759 aa17.58■□□□□ 0.4
EDC3-206ENST00000563009 SH2B1Q9NRF2 756 aaPredicted RBP17.58■□□□□ 0.4
EDC3-206ENST00000563009 BARHL2Q9NY43 387 aa17.58■□□□□ 0.4
EDC3-206ENST00000563009 STXBP3O00186 592 aa17.57■□□□□ 0.4
EDC3-206ENST00000563009 CD2BP2O95400 341 aaKnown RBP17.57■□□□□ 0.4
EDC3-206ENST00000563009 CTDNEP1O95476 244 aa17.57■□□□□ 0.4
EDC3-206ENST00000563009 INHAP05111 366 aa17.57■□□□□ 0.4
EDC3-206ENST00000563009 CALML3P27482 149 aa17.57■□□□□ 0.4
EDC3-206ENST00000563009 MCM2P49736 904 aa17.57■□□□□ 0.4
EDC3-206ENST00000563009 AKAP17AQ02040 695 aaKnown RBP17.57■□□□□ 0.4
EDC3-206ENST00000563009 SSRP1Q08945 709 aaKnown RBP17.57■□□□□ 0.4
EDC3-206ENST00000563009 MAP3K21Q5TCX8 1036 aa17.57■□□□□ 0.4
EDC3-206ENST00000563009 TYW1BQ6NUM6 668 aa17.57■□□□□ 0.4
EDC3-206ENST00000563009 PPP1R18Q6NYC8 613 aa17.57■□□□□ 0.4
EDC3-206ENST00000563009 TEX2Q8IWB9 1127 aa17.57■□□□□ 0.4
EDC3-206ENST00000563009 TRIM22Q8IYM9 498 aa17.57■□□□□ 0.4
EDC3-206ENST00000563009 SYTL5Q8TDW5 730 aaPredicted RBP17.57■□□□□ 0.4
EDC3-206ENST00000563009 PURBQ96QR8 312 aaKnown RBP17.57■□□□□ 0.4
EDC3-206ENST00000563009 TINF2Q9BSI4 451 aa17.57■□□□□ 0.4
EDC3-206ENST00000563009 SYNGAP1Q96PV0 1343 aa17.56■□□□□ 0.4
EDC3-206ENST00000563009 STK36Q9NRP7 1315 aa17.56■□□□□ 0.4
EDC3-206ENST00000563009 LOC102724159A0A0B4J2E5 919 aa17.56■□□□□ 0.4
EDC3-206ENST00000563009 PIK3CDO00329 1044 aa17.56■□□□□ 0.4
EDC3-206ENST00000563009 PPFIA3O75145 1194 aa17.56■□□□□ 0.4
EDC3-206ENST00000563009 CFBP00751 764 aa17.56■□□□□ 0.4
EDC3-206ENST00000563009 TRIM32Q13049 653 aa17.56■□□□□ 0.4
EDC3-206ENST00000563009 PWP2Q15269 919 aaKnown RBP17.56■□□□□ 0.4
EDC3-206ENST00000563009 MFSD14CQ5VZR4 134 aa17.56■□□□□ 0.4
EDC3-206ENST00000563009 DNERQ8NFT8 737 aa17.56■□□□□ 0.4
EDC3-206ENST00000563009 ABHD8Q96I13 439 aa17.56■□□□□ 0.4
EDC3-206ENST00000563009 COL20A1Q9P218 1284 aa17.56■□□□□ 0.4
EDC3-206ENST00000563009 ADD3Q9UEY8 706 aaKnown RBP17.56■□□□□ 0.4
EDC3-206ENST00000563009 GCOM1H8Y6P7 765 aaPredicted RBP17.55■□□□□ 0.4
EDC3-206ENST00000563009 DEXIO95424 95 aa17.55■□□□□ 0.4
EDC3-206ENST00000563009 POLR2MP0CAP2 368 aa17.55■□□□□ 0.4
EDC3-206ENST00000563009 CYP2C19P33261 490 aa17.55■□□□□ 0.4
EDC3-206ENST00000563009 NAPAP54920 295 aa17.55■□□□□ 0.4
EDC3-206ENST00000563009 UBXN2AP68543 259 aa17.55■□□□□ 0.4
EDC3-206ENST00000563009 CACNB2Q08289 660 aaPredicted RBP17.55■□□□□ 0.4
EDC3-206ENST00000563009 NSUN7Q8NE18 718 aaKnown RBP17.55■□□□□ 0.4
EDC3-206ENST00000563009 MORC4Q8TE76 937 aa17.55■□□□□ 0.4
EDC3-206ENST00000563009 PSTPIP2Q9H939 334 aa17.55■□□□□ 0.4
EDC3-206ENST00000563009 BIN2Q9UBW5 565 aaPredicted RBP17.55■□□□□ 0.4
EDC3-206ENST00000563009 ESYT2A0FGR8 921 aa17.54■□□□□ 0.4
EDC3-206ENST00000563009 ASB14A6NK59 587 aa17.54■□□□□ 0.4
EDC3-206ENST00000563009 MEIS2O14770 477 aa17.54■□□□□ 0.4
EDC3-206ENST00000563009 PRKAR2AP13861 404 aaKnown RBP17.54■□□□□ 0.4
EDC3-206ENST00000563009 ALDH5A1P51649 535 aaPredicted RBP17.54■□□□□ 0.4
EDC3-206ENST00000563009 SH3GLB2Q9NR46 395 aa17.54■□□□□ 0.4
EDC3-206ENST00000563009 NRBP1Q9UHY1 535 aa17.54■□□□□ 0.4
EDC3-206ENST00000563009 RPTORQ8N122 1335 aa17.53■□□□□ 0.4
EDC3-206ENST00000563009 LRRC37A2A6NM11 1700 aa17.53■□□□□ 0.4
EDC3-206ENST00000563009 SNAI1O95863 264 aaPredicted RBP17.53■□□□□ 0.4
EDC3-206ENST00000563009 CYBAP13498 195 aa17.53■□□□□ 0.4
EDC3-206ENST00000563009 EDNRBP24530 442 aa17.53■□□□□ 0.4
EDC3-206ENST00000563009 HOXA13P31271 388 aaPredicted RBP17.53■□□□□ 0.4
EDC3-206ENST00000563009 ARMCX2Q7L311 632 aa17.53■□□□□ 0.4
EDC3-206ENST00000563009 CCDC83Q8IWF9 413 aa17.53■□□□□ 0.4
EDC3-206ENST00000563009 FAM177A1Q8N128 213 aaPredicted RBP17.53■□□□□ 0.4
EDC3-206ENST00000563009 CCDC12Q8WUD4 166 aaPredicted RBP17.53■□□□□ 0.4
EDC3-206ENST00000563009 SHISA4Q96DD7 197 aa17.53■□□□□ 0.4
EDC3-206ENST00000563009 TMX3Q96JJ7 454 aa17.53■□□□□ 0.4
EDC3-206ENST00000563009 TAAR1Q96RJ0 339 aa17.53■□□□□ 0.4
EDC3-206ENST00000563009 LLPHQ9BRT6 129 aaKnown RBP17.53■□□□□ 0.4
EDC3-206ENST00000563009 ZMYND12Q9H0C1 365 aa17.53■□□□□ 0.4
EDC3-206ENST00000563009 RIC8AQ9NPQ8 531 aa17.53■□□□□ 0.4
EDC3-206ENST00000563009 MCM3APO60318 1980 aa17.53■□□□□ 0.4
EDC3-206ENST00000563009 BRCA2P51587 3418 aa17.53■□□□□ 0.4
EDC3-206ENST00000563009 FRMPD4Q14CM0 1322 aa17.52■□□□□ 0.4
EDC3-206ENST00000563009 CCL5P13501 91 aa17.52■□□□□ 0.4
EDC3-206ENST00000563009 FDPSP14324 419 aaKnown RBP17.52■□□□□ 0.4
EDC3-206ENST00000563009 MTFR1Q15390 333 aa17.52■□□□□ 0.4
EDC3-206ENST00000563009 USP17L6PQ6QN14 398 aa17.52■□□□□ 0.4
EDC3-206ENST00000563009 TRPV1Q8NER1 839 aa17.52■□□□□ 0.4
EDC3-206ENST00000563009 SMARCC2Q8TAQ2 1214 aa17.52■□□□□ 0.4
EDC3-206ENST00000563009 NSUN6Q8TEA1 469 aaKnown RBP17.52■□□□□ 0.4
EDC3-206ENST00000563009 CUL5Q93034 780 aa17.52■□□□□ 0.4
EDC3-206ENST00000563009 RMDN3Q96TC7 470 aa17.52■□□□□ 0.4
EDC3-206ENST00000563009 KATNBL1Q9H079 304 aa17.52■□□□□ 0.4
EDC3-206ENST00000563009 GLT8D2Q9H1C3 349 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms