RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 NOP58Q9Y2X3 529 aaKnown RBP6.27□□□□□ -1.41
CASC4-206ENST00000558847 EMC9Q9Y3B6 208 aa6.27□□□□□ -1.41
CASC4-206ENST00000558847 H0Y8X5 98 aa6.26□□□□□ -1.41
CASC4-206ENST00000558847 ETV2O00321 342 aaPredicted RBP6.26□□□□□ -1.41
CASC4-206ENST00000558847 MEIS1O00470 390 aa6.26□□□□□ -1.41
CASC4-206ENST00000558847 PLD2O14939 933 aa6.26□□□□□ -1.41
CASC4-206ENST00000558847 SYPP08247 313 aa6.26□□□□□ -1.41
CASC4-206ENST00000558847 TRHRP34981 398 aaPredicted RBP6.26□□□□□ -1.41
CASC4-206ENST00000558847 PCBP3P57721 371 aaKnown RBP6.26□□□□□ -1.41
CASC4-206ENST00000558847 TRIM59Q8IWR1 403 aa6.26□□□□□ -1.41
CASC4-206ENST00000558847 FIBCD1Q8N539 461 aa6.26□□□□□ -1.41
CASC4-206ENST00000558847 ZNF513Q8N8E2 541 aaPredicted RBP6.26□□□□□ -1.41
CASC4-206ENST00000558847 DSCC1Q9BVC3 393 aa6.26□□□□□ -1.41
CASC4-206ENST00000558847 MRPL4Q9BYD3 311 aaKnown RBP6.26□□□□□ -1.41
CASC4-206ENST00000558847 IFT57Q9NWB7 429 aa6.26□□□□□ -1.41
CASC4-206ENST00000558847 APEX2Q9UBZ4 518 aa6.26□□□□□ -1.41
CASC4-206ENST00000558847 CGGBP1Q9UFW8 167 aaPredicted RBP6.26□□□□□ -1.41
CASC4-206ENST00000558847 MRPS23Q9Y3D9 190 aaKnown RBP6.26□□□□□ -1.41
CASC4-206ENST00000558847 NUAK1O60285 661 aa6.25□□□□□ -1.41
CASC4-206ENST00000558847 CPP00450 1065 aa6.25□□□□□ -1.41
CASC4-206ENST00000558847 HPXP02790 462 aa6.25□□□□□ -1.41
CASC4-206ENST00000558847 CDK11BP21127 795 aaKnown RBP6.25□□□□□ -1.41
CASC4-206ENST00000558847 CEBPAP49715 358 aaPredicted RBP6.25□□□□□ -1.41
CASC4-206ENST00000558847 FNDC3BQ53EP0 1204 aaKnown RBP6.25□□□□□ -1.41
CASC4-206ENST00000558847 CWF19L1Q69YN2 538 aaKnown RBP6.25□□□□□ -1.41
CASC4-206ENST00000558847 NSMFQ6X4W1 530 aa6.25□□□□□ -1.41
CASC4-206ENST00000558847 LINC01599Q8WXQ3 324 aa6.25□□□□□ -1.41
CASC4-206ENST00000558847 NINJ1Q92982 152 aa6.25□□□□□ -1.41
CASC4-206ENST00000558847 BRF1Q92994 677 aa6.25□□□□□ -1.41
CASC4-206ENST00000558847 KISS1RQ969F8 398 aaPredicted RBP6.25□□□□□ -1.41
CASC4-206ENST00000558847 MFSD3Q96ES6 412 aa6.25□□□□□ -1.41
CASC4-206ENST00000558847 NCOA5Q9HCD5 579 aaKnown RBP6.25□□□□□ -1.41
CASC4-206ENST00000558847 SMG5Q9UPR3 1016 aaKnown RBP6.25□□□□□ -1.41
CASC4-206ENST00000558847 EFCAB14O75071 495 aa6.24□□□□□ -1.41
CASC4-206ENST00000558847 FKTNO75072 461 aa6.24□□□□□ -1.41
CASC4-206ENST00000558847 GSNP06396 782 aa6.24□□□□□ -1.41
CASC4-206ENST00000558847 PABPC1P11940 636 aaKnown RBP6.24□□□□□ -1.41
CASC4-206ENST00000558847 HOXC12P31275 282 aa6.24□□□□□ -1.41
CASC4-206ENST00000558847 AMPD2Q01433 879 aa6.24□□□□□ -1.41
CASC4-206ENST00000558847 RTP2Q5QGT7 225 aa6.24□□□□□ -1.41
CASC4-206ENST00000558847 ZPBP2Q6X784 338 aa6.24□□□□□ -1.41
CASC4-206ENST00000558847 NIM1KQ8IY84 436 aa6.24□□□□□ -1.41
CASC4-206ENST00000558847 OXR1Q8N573 874 aa6.24□□□□□ -1.41
CASC4-206ENST00000558847 KCTD13Q8WZ19 329 aa6.24□□□□□ -1.41
CASC4-206ENST00000558847 MRGPRX3Q96LB0 322 aa6.24□□□□□ -1.41
CASC4-206ENST00000558847 RNF32Q9H0A6 362 aa6.24□□□□□ -1.41
CASC4-206ENST00000558847 C19orf44Q9H6X5 657 aa6.24□□□□□ -1.41
CASC4-206ENST00000558847 CD320Q9NPF0 282 aa6.24□□□□□ -1.41
CASC4-206ENST00000558847 INTS7Q9NVH2 962 aaKnown RBP6.24□□□□□ -1.41
CASC4-206ENST00000558847 COL4A3BPQ9Y5P4 624 aa6.24□□□□□ -1.41
CASC4-206ENST00000558847 KRTAP9-7A8MTY7 169 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 PRODHO43272 600 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 VAV1P15498 845 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 ENDOUP21128 410 aaKnown RBP6.23□□□□□ -1.41
CASC4-206ENST00000558847 GLDCP23378 1020 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 LINC00310P59036 64 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 POU4F1Q01851 419 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 MAP4K2Q12851 820 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 TKFCQ3LXA3 575 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 DALRD3Q5D0E6 543 aaKnown RBP6.23□□□□□ -1.41
CASC4-206ENST00000558847 TMEM132EQ6IEE7 984 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 WAPLQ7Z5K2 1190 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 PDZD8Q8NEN9 1154 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 ADCY4Q8NFM4 1077 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 MAP6Q96JE9 813 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 EXOC2Q96KP1 924 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 SLC12A9Q9BXP2 914 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 NKX2-4Q9H2Z4 354 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 NOL6Q9H6R4 1146 aaKnown RBP6.23□□□□□ -1.41
CASC4-206ENST00000558847 ERVK13-1Q9NX77 482 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 CD2APQ9Y5K6 639 aa6.23□□□□□ -1.41
CASC4-206ENST00000558847 NOTOA8MTQ0 251 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 B8ZZF3 427 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 KCNH1O95259 989 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 EFEMP2O95967 443 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 VIL1P09327 827 aaKnown RBP6.22□□□□□ -1.41
CASC4-206ENST00000558847 INHBBP09529 407 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 MED14OSP0DP75 135 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 NAT1P18440 290 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 NOP2P46087 812 aaKnown RBP6.22□□□□□ -1.41
CASC4-206ENST00000558847 MASP1P48740 699 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 GABREP78334 506 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 DUSP4Q13115 394 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 PABPC4Q13310 644 aaKnown RBP eCLIP6.22□□□□□ -1.41
CASC4-206ENST00000558847 TIGD5Q53EQ6 642 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 FAM209AQ5JX71 171 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 GTF2IRD2BQ6EKJ0 949 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 TTLL10Q6ZVT0 673 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 KRT26Q7Z3Y9 468 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 GTF2IRD2Q86UP8 949 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 FCRL2Q96LA5 508 aaPredicted RBP6.22□□□□□ -1.41
CASC4-206ENST00000558847 IER2Q9BTL4 223 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 IRF2BPLQ9H1B7 796 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 SLC6A17Q9H1V8 727 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 CYP26B1Q9NR63 512 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 MAGEC2Q9UBF1 373 aaPredicted RBP6.22□□□□□ -1.41
CASC4-206ENST00000558847 SFMBT1Q9UHJ3 866 aa6.22□□□□□ -1.41
CASC4-206ENST00000558847 KCNQ2O43526 872 aa6.21□□□□□ -1.42
CASC4-206ENST00000558847 USP2O75604 605 aaPredicted RBP6.21□□□□□ -1.42
CASC4-206ENST00000558847 CAPNS1P04632 268 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms