RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 GCOM1H8Y6P7 765 aaPredicted RBP16.29■□□□□ 0.2
SNX6-206ENST00000556162 STXBP3O00186 592 aa16.29■□□□□ 0.2
SNX6-206ENST00000556162 OPLAHO14841 1288 aa16.29■□□□□ 0.2
SNX6-206ENST00000556162 POLR2MP0CAP2 368 aa16.29■□□□□ 0.2
SNX6-206ENST00000556162 PPP1R18Q6NYC8 613 aa16.29■□□□□ 0.2
SNX6-206ENST00000556162 TRMT44Q8IYL2 757 aaKnown RBP16.29■□□□□ 0.2
SNX6-206ENST00000556162 NPLOC4Q8TAT6 608 aa16.29■□□□□ 0.2
SNX6-206ENST00000556162 PXYLP1Q8TE99 480 aa16.29■□□□□ 0.2
SNX6-206ENST00000556162 WASF1Q92558 559 aa16.29■□□□□ 0.2
SNX6-206ENST00000556162 PSTPIP2Q9H939 334 aa16.29■□□□□ 0.2
SNX6-206ENST00000556162 DTNBO60941 627 aa16.29■□□□□ 0.2
SNX6-206ENST00000556162 CNTN2Q02246 1040 aa16.29■□□□□ 0.2
SNX6-206ENST00000556162 SLC30A10Q6XR72 485 aa16.29■□□□□ 0.2
SNX6-206ENST00000556162 FAM133AQ8N9E0 248 aa16.29■□□□□ 0.2
SNX6-206ENST00000556162 CUL5Q93034 780 aa16.29■□□□□ 0.2
SNX6-206ENST00000556162 SNX21Q969T3 373 aa16.29■□□□□ 0.2
SNX6-206ENST00000556162 PLXNB2O15031 1838 aa16.28■□□□□ 0.2
SNX6-206ENST00000556162 SMCO2A6NFE2 343 aa16.28■□□□□ 0.2
SNX6-206ENST00000556162 JAK2O60674 1132 aa16.28■□□□□ 0.2
SNX6-206ENST00000556162 GRK4P32298 578 aa16.28■□□□□ 0.2
SNX6-206ENST00000556162 HSD17B4P51659 736 aa16.28■□□□□ 0.2
SNX6-206ENST00000556162 MRPL12P52815 198 aaKnown RBP16.28■□□□□ 0.2
SNX6-206ENST00000556162 GHRHRQ02643 423 aa16.28■□□□□ 0.2
SNX6-206ENST00000556162 TYW1BQ6NUM6 668 aa16.28■□□□□ 0.2
SNX6-206ENST00000556162 SLAIN1Q8ND83 568 aa16.28■□□□□ 0.2
SNX6-206ENST00000556162 SYTL5Q8TDW5 730 aaPredicted RBP16.28■□□□□ 0.2
SNX6-206ENST00000556162 MAML3Q96JK9 1138 aa16.28■□□□□ 0.2
SNX6-206ENST00000556162 ADD3Q9UEY8 706 aaKnown RBP16.28■□□□□ 0.2
SNX6-206ENST00000556162 FDPSP14324 419 aaKnown RBP16.27■□□□□ 0.2
SNX6-206ENST00000556162 XBP1P17861 261 aa16.27■□□□□ 0.2
SNX6-206ENST00000556162 CCL14Q16627 93 aa16.27■□□□□ 0.2
SNX6-206ENST00000556162 CCDC148Q8NFR7 591 aa16.27■□□□□ 0.2
SNX6-206ENST00000556162 SMARCC2Q8TAQ2 1214 aa16.27■□□□□ 0.2
SNX6-206ENST00000556162 MCOLN1Q9GZU1 580 aa16.27■□□□□ 0.2
SNX6-206ENST00000556162 GLT8D2Q9H1C3 349 aa16.27■□□□□ 0.2
SNX6-206ENST00000556162 SH3GLB2Q9NR46 395 aa16.27■□□□□ 0.2
SNX6-206ENST00000556162 VPS54Q9P1Q0 977 aa16.27■□□□□ 0.2
SNX6-206ENST00000556162 HTTP42858 3142 aa16.27■□□□□ 0.19
SNX6-206ENST00000556162 CENPFP49454 3210 aa16.27■□□□□ 0.19
SNX6-206ENST00000556162 ELNP15502 786 aa16.27■□□□□ 0.19
SNX6-206ENST00000556162 HOXA13P31271 388 aaPredicted RBP16.27■□□□□ 0.19
SNX6-206ENST00000556162 ADCY7P51828 1080 aa16.27■□□□□ 0.19
SNX6-206ENST00000556162 HMGN5P82970 282 aaKnown RBP16.27■□□□□ 0.19
SNX6-206ENST00000556162 SLC9C1Q4G0N8 1177 aa16.27■□□□□ 0.19
SNX6-206ENST00000556162 OLFML2BQ68BL8 750 aa16.27■□□□□ 0.19
SNX6-206ENST00000556162 ZNF467Q7Z7K2 595 aaPredicted RBP16.27■□□□□ 0.19
SNX6-206ENST00000556162 PURBQ96QR8 312 aaKnown RBP16.27■□□□□ 0.19
SNX6-206ENST00000556162 C6orf50Q9HD87 102 aa16.27■□□□□ 0.19
SNX6-206ENST00000556162 RIC8AQ9NPQ8 531 aa16.27■□□□□ 0.19
SNX6-206ENST00000556162 BIN2Q9UBW5 565 aaPredicted RBP16.27■□□□□ 0.19
SNX6-206ENST00000556162 ZNFX1Q9P2E3 1918 aaKnown RBP16.26■□□□□ 0.19
SNX6-206ENST00000556162 SOWAHBA6NEL2 793 aa16.26■□□□□ 0.19
SNX6-206ENST00000556162 K7ELQ4 463 aaPredicted RBP16.26■□□□□ 0.19
SNX6-206ENST00000556162 PIK3CDO00329 1044 aa16.26■□□□□ 0.19
SNX6-206ENST00000556162 GNA11P29992 359 aa16.26■□□□□ 0.19
SNX6-206ENST00000556162 COL13A1Q5TAT6 717 aaPredicted RBP16.26■□□□□ 0.19
SNX6-206ENST00000556162 USP17L6PQ6QN14 398 aa16.26■□□□□ 0.19
SNX6-206ENST00000556162 TEX2Q8IWB9 1127 aa16.26■□□□□ 0.19
SNX6-206ENST00000556162 HSCBQ8IWL3 235 aa16.26■□□□□ 0.19
SNX6-206ENST00000556162 MSL3Q8N5Y2 521 aaKnown RBP16.26■□□□□ 0.19
SNX6-206ENST00000556162 DNERQ8NFT8 737 aa16.26■□□□□ 0.19
SNX6-206ENST00000556162 TRIB2Q92519 343 aa16.26■□□□□ 0.19
SNX6-206ENST00000556162 AIFM3Q96NN9 605 aa16.26■□□□□ 0.19
SNX6-206ENST00000556162 TINF2Q9BSI4 451 aa16.26■□□□□ 0.19
SNX6-206ENST00000556162 ALG1Q9BT22 464 aa16.26■□□□□ 0.19
SNX6-206ENST00000556162 FLRT1Q9NZU1 646 aa16.26■□□□□ 0.19
SNX6-206ENST00000556162 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.26■□□□□ 0.19
SNX6-206ENST00000556162 ZNF236Q9UL36 1845 aa16.26■□□□□ 0.19
SNX6-206ENST00000556162 ESYT2A0FGR8 921 aa16.25■□□□□ 0.19
SNX6-206ENST00000556162 MEIS2O14770 477 aa16.25■□□□□ 0.19
SNX6-206ENST00000556162 HMGCRP04035 888 aa16.25■□□□□ 0.19
SNX6-206ENST00000556162 NLRP5P59047 1200 aa16.25■□□□□ 0.19
SNX6-206ENST00000556162 MFSD14CQ5VZR4 134 aa16.25■□□□□ 0.19
SNX6-206ENST00000556162 FCHSD1Q86WN1 690 aa16.25■□□□□ 0.19
SNX6-206ENST00000556162 FAM177A1Q8N128 213 aaPredicted RBP16.25■□□□□ 0.19
SNX6-206ENST00000556162 FAM184AQ8NB25 1140 aa16.25■□□□□ 0.19
SNX6-206ENST00000556162 TAAR1Q96RJ0 339 aa16.25■□□□□ 0.19
SNX6-206ENST00000556162 RMDN3Q96TC7 470 aa16.25■□□□□ 0.19
SNX6-206ENST00000556162 MPHOSPH6Q99547 160 aaKnown RBP16.25■□□□□ 0.19
SNX6-206ENST00000556162 ZMYND12Q9H0C1 365 aa16.25■□□□□ 0.19
SNX6-206ENST00000556162 COL20A1Q9P218 1284 aa16.25■□□□□ 0.19
SNX6-206ENST00000556162 ASB14A6NK59 587 aa16.25■□□□□ 0.19
SNX6-206ENST00000556162 B4DLN1 442 aa16.25■□□□□ 0.19
SNX6-206ENST00000556162 MAMDC4Q6UXC1 1216 aa16.25■□□□□ 0.19
SNX6-206ENST00000556162 NSUN6Q8TEA1 469 aaKnown RBP16.25■□□□□ 0.19
SNX6-206ENST00000556162 SH3TC2Q8TF17 1288 aa16.25■□□□□ 0.19
SNX6-206ENST00000556162 FGD4Q96M96 766 aa16.25■□□□□ 0.19
SNX6-206ENST00000556162 LOC102724159A0A0B4J2E5 919 aa16.24■□□□□ 0.19
SNX6-206ENST00000556162 CYP2C19P33261 490 aa16.24■□□□□ 0.19
SNX6-206ENST00000556162 ALDH5A1P51649 535 aaPredicted RBP16.24■□□□□ 0.19
SNX6-206ENST00000556162 CUL4AQ13619 759 aa16.24■□□□□ 0.19
SNX6-206ENST00000556162 PWP2Q15269 919 aaKnown RBP16.24■□□□□ 0.19
SNX6-206ENST00000556162 UBE2SQ16763 222 aa16.24■□□□□ 0.19
SNX6-206ENST00000556162 ARHGEF16Q5VV41 709 aa16.24■□□□□ 0.19
SNX6-206ENST00000556162 BICD2Q8TD16 824 aa16.24■□□□□ 0.19
SNX6-206ENST00000556162 KIF3AQ9Y496 699 aa16.24■□□□□ 0.19
SNX6-206ENST00000556162 SPDYE3A6NKU9 549 aa16.23■□□□□ 0.19
SNX6-206ENST00000556162 UBXN2AP68543 259 aa16.23■□□□□ 0.19
SNX6-206ENST00000556162 TRIM29Q14134 588 aa16.23■□□□□ 0.19
SNX6-206ENST00000556162 GALNT17Q6IS24 598 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms