RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 CCDC144CPQ8IYA2 1237 aa8.83□□□□□ -1
GNE-205ENST00000539815 ECHDC1Q9NTX5 307 aa8.83□□□□□ -1
GNE-205ENST00000539815 DBNLQ9UJU6 430 aaKnown RBP8.83□□□□□ -1
GNE-205ENST00000539815 PRRC2BQ5JSZ5 2229 aaKnown RBP8.83□□□□□ -1
GNE-205ENST00000539815 TRIM43BA6NCK2 446 aa8.82□□□□□ -1
GNE-205ENST00000539815 MARCH6O60337 910 aa8.82□□□□□ -1
GNE-205ENST00000539815 TMEM132BQ14DG7 1078 aa8.82□□□□□ -1
GNE-205ENST00000539815 TMEM240Q5SV17 173 aa8.82□□□□□ -1
GNE-205ENST00000539815 LCORLQ8N3X6 602 aa8.82□□□□□ -1
GNE-205ENST00000539815 TRIM43Q96BQ3 446 aaPredicted RBP8.82□□□□□ -1
GNE-205ENST00000539815 IFIH1Q9BYX4 1025 aaKnown RBP8.82□□□□□ -1
GNE-205ENST00000539815 TRPV6Q9H1D0 765 aa8.82□□□□□ -1
GNE-205ENST00000539815 CGNQ9P2M7 1197 aaKnown RBP8.82□□□□□ -1
GNE-205ENST00000539815 NKRFO15226 690 aaKnown RBP eCLIP8.82□□□□□ -1
GNE-205ENST00000539815 CFBP00751 764 aa8.82□□□□□ -1
GNE-205ENST00000539815 PTCRAQ6ISU1 281 aaPredicted RBP8.82□□□□□ -1
GNE-205ENST00000539815 FBXO16Q8IX29 292 aaPredicted RBP8.82□□□□□ -1
GNE-205ENST00000539815 EAF2Q96CJ1 260 aaPredicted RBP8.82□□□□□ -1
GNE-205ENST00000539815 NECAB3Q96P71 396 aaPredicted RBP8.82□□□□□ -1
GNE-205ENST00000539815 EHMT1Q9H9B1 1298 aa8.82□□□□□ -1
GNE-205ENST00000539815 SYNGAP1Q96PV0 1343 aa8.82□□□□□ -1
GNE-205ENST00000539815 GH1P01241 217 aa8.82□□□□□ -1
GNE-205ENST00000539815 CTNNB1P35222 781 aa8.82□□□□□ -1
GNE-205ENST00000539815 ZNF76P36508 570 aa8.82□□□□□ -1
GNE-205ENST00000539815 MOGSQ13724 837 aa8.82□□□□□ -1
GNE-205ENST00000539815 KRI1Q8N9T8 703 aaKnown RBP8.82□□□□□ -1
GNE-205ENST00000539815 STAG1Q8WVM7 1258 aa8.82□□□□□ -1
GNE-205ENST00000539815 NYAP2Q9P242 653 aa8.82□□□□□ -1
GNE-205ENST00000539815 ZNF215Q9UL58 517 aaPredicted RBP8.82□□□□□ -1
GNE-205ENST00000539815 MRPL11Q9Y3B7 192 aaKnown RBP8.82□□□□□ -1
GNE-205ENST00000539815 CYP2D7A0A087X1C5 515 aa8.81□□□□□ -1
GNE-205ENST00000539815 NCK2O43639 380 aa8.81□□□□□ -1
GNE-205ENST00000539815 RFC2P35250 354 aa8.81□□□□□ -1
GNE-205ENST00000539815 MAP3K10Q02779 954 aa8.81□□□□□ -1
GNE-205ENST00000539815 PTGISQ16647 500 aa8.81□□□□□ -1
GNE-205ENST00000539815 KCTD1Q719H9 257 aa8.81□□□□□ -1
GNE-205ENST00000539815 ATOH1Q92858 354 aaPredicted RBP8.81□□□□□ -1
GNE-205ENST00000539815 GLG1Q92896 1179 aa8.81□□□□□ -1
GNE-205ENST00000539815 ANTXR1Q9H6X2 564 aa8.81□□□□□ -1
GNE-205ENST00000539815 FLRT1Q9NZU1 646 aa8.81□□□□□ -1
GNE-205ENST00000539815 TAL1P17542 331 aaPredicted RBP8.81□□□□□ -1
GNE-205ENST00000539815 SHMT1P34896 483 aa8.81□□□□□ -1
GNE-205ENST00000539815 PBX2P40425 430 aa8.81□□□□□ -1
GNE-205ENST00000539815 TFF2Q03403 129 aa8.81□□□□□ -1
GNE-205ENST00000539815 BAATQ14032 418 aaPredicted RBP8.81□□□□□ -1
GNE-205ENST00000539815 STXBP2Q15833 593 aa8.81□□□□□ -1
GNE-205ENST00000539815 FIBCD1Q8N539 461 aa8.81□□□□□ -1
GNE-205ENST00000539815 PRRX2Q99811 253 aa8.81□□□□□ -1
GNE-205ENST00000539815 AAASQ9NRG9 546 aa8.81□□□□□ -1
GNE-205ENST00000539815 ANKRD36CQ5JPF3 1778 aa8.81□□□□□ -1
GNE-205ENST00000539815 SYNRGQ9UMZ2 1314 aa8.81□□□□□ -1
GNE-205ENST00000539815 THSD7BQ9C0I4 1608 aa8.81□□□□□ -1
GNE-205ENST00000539815 PPFIA3O75145 1194 aa8.81□□□□□ -1
GNE-205ENST00000539815 PSMC6P62333 389 aa8.81□□□□□ -1
GNE-205ENST00000539815 NFXL1Q6ZNB6 911 aa8.81□□□□□ -1
GNE-205ENST00000539815 MFSD6Q6ZSS7 791 aa8.81□□□□□ -1
GNE-205ENST00000539815 FCHSD1Q86WN1 690 aa8.81□□□□□ -1
GNE-205ENST00000539815 CKAP2LQ8IYA6 745 aa8.81□□□□□ -1
GNE-205ENST00000539815 APPBP2Q92624 585 aa8.81□□□□□ -1
GNE-205ENST00000539815 DCXO43602 365 aa8.8□□□□□ -1
GNE-205ENST00000539815 PRKAB2O43741 272 aa8.8□□□□□ -1
GNE-205ENST00000539815 CTSHP09668 335 aa8.8□□□□□ -1
GNE-205ENST00000539815 THPOP40225 353 aa8.8□□□□□ -1
GNE-205ENST00000539815 HOMER1Q86YM7 354 aa8.8□□□□□ -1
GNE-205ENST00000539815 CXXC1Q9P0U4 656 aaPredicted RBP8.8□□□□□ -1
GNE-205ENST00000539815 INSL6Q9Y581 213 aa8.8□□□□□ -1
GNE-205ENST00000539815 FAM86C2PA6NEL3 165 aa8.8□□□□□ -1
GNE-205ENST00000539815 GPM6BQ13491 265 aa8.8□□□□□ -1
GNE-205ENST00000539815 BTG3Q14201 252 aaPredicted RBP8.8□□□□□ -1
GNE-205ENST00000539815 UBE3CQ15386 1083 aa8.8□□□□□ -1
GNE-205ENST00000539815 CLUL1Q15846 466 aa8.8□□□□□ -1
GNE-205ENST00000539815 DGKDQ16760 1214 aa8.8□□□□□ -1
GNE-205ENST00000539815 CAGE1Q8TC20 777 aa8.8□□□□□ -1
GNE-205ENST00000539815 ESR2Q92731 530 aa8.8□□□□□ -1
GNE-205ENST00000539815 AZI2Q9H6S1 392 aa8.8□□□□□ -1
GNE-205ENST00000539815 SH3BP1Q9Y3L3 701 aa8.8□□□□□ -1
GNE-205ENST00000539815 SPTBN2O15020 2390 aa8.8□□□□□ -1
GNE-205ENST00000539815 RFX7Q2KHR2 1363 aa8.8□□□□□ -1
GNE-205ENST00000539815 H3BQ06 376 aaPredicted RBP8.79□□□□□ -1
GNE-205ENST00000539815 RFXAPO00287 272 aa8.79□□□□□ -1
GNE-205ENST00000539815 RNF113AO15541 343 aaKnown RBP8.79□□□□□ -1
GNE-205ENST00000539815 FAAP100Q0VG06 881 aa8.79□□□□□ -1
GNE-205ENST00000539815 ODR4Q5SWX8 454 aa8.79□□□□□ -1
GNE-205ENST00000539815 TATDN1Q6P1N9 297 aa8.79□□□□□ -1
GNE-205ENST00000539815 NSUN6Q8TEA1 469 aaKnown RBP8.79□□□□□ -1
GNE-205ENST00000539815 PBXIP1Q96AQ6 731 aa8.79□□□□□ -1
GNE-205ENST00000539815 CCDC43Q96MW1 224 aaKnown RBP8.79□□□□□ -1
GNE-205ENST00000539815 SEC63Q9UGP8 760 aaKnown RBP8.79□□□□□ -1
GNE-205ENST00000539815 FBXL21Q9UKT6 434 aa8.79□□□□□ -1
GNE-205ENST00000539815 IRX5P78411 483 aaPredicted RBP8.79□□□□□ -1
GNE-205ENST00000539815 SEMA3FQ13275 785 aa8.79□□□□□ -1
GNE-205ENST00000539815 C12orf60Q5U649 245 aa8.79□□□□□ -1
GNE-205ENST00000539815 SYDE2Q5VT97 1194 aa8.79□□□□□ -1
GNE-205ENST00000539815 EGFL6Q8IUX8 553 aa8.79□□□□□ -1
GNE-205ENST00000539815 SMARCC2Q8TAQ2 1214 aa8.79□□□□□ -1
GNE-205ENST00000539815 TTYH1Q9H313 450 aaPredicted RBP8.79□□□□□ -1
GNE-205ENST00000539815 MYO7AQ13402 2215 aa8.79□□□□□ -1
GNE-205ENST00000539815 KDM3BQ7LBC6 1761 aa8.79□□□□□ -1
GNE-205ENST00000539815 GPAA1O43292 621 aa8.79□□□□□ -1
GNE-205ENST00000539815 SORBS3O60504 671 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 186.4 ms