RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 VAT1LQ9HCJ6 419 aa17.48■□□□□ 0.39
RAB40B-202ENST00000538809 VTA1Q9NP79 307 aa17.48■□□□□ 0.39
RAB40B-202ENST00000538809 PNMA2Q9UL42 364 aa17.48■□□□□ 0.39
RAB40B-202ENST00000538809 GNEQ9Y223 722 aaKnown RBP17.48■□□□□ 0.39
RAB40B-202ENST00000538809 E7EWF7 191 aa17.47■□□□□ 0.39
RAB40B-202ENST00000538809 CHST3Q7LGC8 479 aa17.47■□□□□ 0.39
RAB40B-202ENST00000538809 RALYLQ86SE5 291 aaKnown RBP17.47■□□□□ 0.39
RAB40B-202ENST00000538809 VTI1AQ96AJ9 217 aa17.47■□□□□ 0.39
RAB40B-202ENST00000538809 LSG1Q9H089 658 aaKnown RBP17.47■□□□□ 0.39
RAB40B-202ENST00000538809 SENP2Q9HC62 589 aa17.47■□□□□ 0.39
RAB40B-202ENST00000538809 RBM8AQ9Y5S9 174 aaKnown RBP17.47■□□□□ 0.39
RAB40B-202ENST00000538809 ABCB11O95342 1321 aa17.47■□□□□ 0.39
RAB40B-202ENST00000538809 SCN10AQ9Y5Y9 1956 aa17.46■□□□□ 0.39
RAB40B-202ENST00000538809 DOCK5Q9H7D0 1870 aa17.46■□□□□ 0.39
RAB40B-202ENST00000538809 IFIT3O14879 490 aaKnown RBP17.46■□□□□ 0.39
RAB40B-202ENST00000538809 DYNC1LI2O43237 492 aaPredicted RBP17.46■□□□□ 0.39
RAB40B-202ENST00000538809 ITGB8P26012 769 aa17.46■□□□□ 0.39
RAB40B-202ENST00000538809 LRIT3Q3SXY7 679 aa17.46■□□□□ 0.39
RAB40B-202ENST00000538809 KIAA1211Q6ZU35 1233 aa17.46■□□□□ 0.39
RAB40B-202ENST00000538809 ESYT1Q9BSJ8 1104 aa17.46■□□□□ 0.39
RAB40B-202ENST00000538809 AP5M1Q9H0R1 490 aa17.46■□□□□ 0.39
RAB40B-202ENST00000538809 JMJD4Q9H9V9 463 aa17.46■□□□□ 0.39
RAB40B-202ENST00000538809 GBF1Q92538 1859 aa17.46■□□□□ 0.38
RAB40B-202ENST00000538809 LAMA2P24043 3122 aaKnown RBP17.45■□□□□ 0.38
RAB40B-202ENST00000538809 A0A0U1RQG5 324 aaPredicted RBP17.45■□□□□ 0.38
RAB40B-202ENST00000538809 PDE4DQ08499 809 aa17.45■□□□□ 0.38
RAB40B-202ENST00000538809 FAAP100Q0VG06 881 aa17.45■□□□□ 0.38
RAB40B-202ENST00000538809 FSCN1Q16658 493 aaKnown RBP17.45■□□□□ 0.38
RAB40B-202ENST00000538809 IQSEC1Q6DN90 963 aa17.45■□□□□ 0.38
RAB40B-202ENST00000538809 CXCL17Q6UXB2 119 aa17.45■□□□□ 0.38
RAB40B-202ENST00000538809 ANKRD33Q7Z3H0 272 aa17.45■□□□□ 0.38
RAB40B-202ENST00000538809 FBXO11Q86XK2 927 aa17.45■□□□□ 0.38
RAB40B-202ENST00000538809 NCOA7Q8NI08 942 aa17.45■□□□□ 0.38
RAB40B-202ENST00000538809 TBC1D5Q92609 795 aa17.45■□□□□ 0.38
RAB40B-202ENST00000538809 TMEM39AQ9NV64 488 aa17.45■□□□□ 0.38
RAB40B-202ENST00000538809 MAD2L2Q9UI95 211 aa17.45■□□□□ 0.38
RAB40B-202ENST00000538809 ELP1O95163 1332 aa17.45■□□□□ 0.38
RAB40B-202ENST00000538809 DCDC2CA8MYV0 355 aa17.44■□□□□ 0.38
RAB40B-202ENST00000538809 KLRF2D3W0D1 207 aa17.44■□□□□ 0.38
RAB40B-202ENST00000538809 KIAA0355O15063 1070 aa17.44■□□□□ 0.38
RAB40B-202ENST00000538809 RAG1P15918 1043 aa17.44■□□□□ 0.38
RAB40B-202ENST00000538809 ANTXR2P58335 489 aa17.44■□□□□ 0.38
RAB40B-202ENST00000538809 NKX3-2P78367 333 aa17.44■□□□□ 0.38
RAB40B-202ENST00000538809 WTAPQ15007 396 aa17.44■□□□□ 0.38
RAB40B-202ENST00000538809 C9orf50Q5SZB4 431 aa17.44■□□□□ 0.38
RAB40B-202ENST00000538809 SCN5AQ14524 2016 aa17.43■□□□□ 0.38
RAB40B-202ENST00000538809 LOC102724159A0A0B4J2E5 919 aa17.43■□□□□ 0.38
RAB40B-202ENST00000538809 ERICH2A1L162 156 aa17.43■□□□□ 0.38
RAB40B-202ENST00000538809 ARVCFO00192 962 aa17.43■□□□□ 0.38
RAB40B-202ENST00000538809 EDNRBP24530 442 aa17.43■□□□□ 0.38
RAB40B-202ENST00000538809 GRM4Q14833 912 aa17.43■□□□□ 0.38
RAB40B-202ENST00000538809 PWP2Q15269 919 aaKnown RBP17.43■□□□□ 0.38
RAB40B-202ENST00000538809 SHHQ15465 462 aa17.43■□□□□ 0.38
RAB40B-202ENST00000538809 SLC35G1Q2M3R5 365 aa17.43■□□□□ 0.38
RAB40B-202ENST00000538809 DUSP28Q4G0W2 176 aa17.43■□□□□ 0.38
RAB40B-202ENST00000538809 Q7L0L9 218 aa17.43■□□□□ 0.38
RAB40B-202ENST00000538809 MB21D2Q8IYB1 491 aaPredicted RBP17.43■□□□□ 0.38
RAB40B-202ENST00000538809 DNERQ8NFT8 737 aa17.43■□□□□ 0.38
RAB40B-202ENST00000538809 WDR11Q9BZH6 1224 aa17.43■□□□□ 0.38
RAB40B-202ENST00000538809 COL20A1Q9P218 1284 aa17.43■□□□□ 0.38
RAB40B-202ENST00000538809 MROH7Q68CQ1 1323 aa17.43■□□□□ 0.38
RAB40B-202ENST00000538809 TANC1Q9C0D5 1861 aa17.42■□□□□ 0.38
RAB40B-202ENST00000538809 PALM3A6NDB9 673 aaPredicted RBP17.42■□□□□ 0.38
RAB40B-202ENST00000538809 PPP1R11O60927 126 aaPredicted RBP17.42■□□□□ 0.38
RAB40B-202ENST00000538809 CDK7P50613 346 aa17.42■□□□□ 0.38
RAB40B-202ENST00000538809 SART3Q15020 963 aaKnown RBP17.42■□□□□ 0.38
RAB40B-202ENST00000538809 TMEM67Q5HYA8 995 aa17.42■□□□□ 0.38
RAB40B-202ENST00000538809 HOMER1Q86YM7 354 aa17.42■□□□□ 0.38
RAB40B-202ENST00000538809 SYTL5Q8TDW5 730 aaPredicted RBP17.42■□□□□ 0.38
RAB40B-202ENST00000538809 TOX2Q96NM4 488 aa17.42■□□□□ 0.38
RAB40B-202ENST00000538809 TAAR1Q96RJ0 339 aa17.42■□□□□ 0.38
RAB40B-202ENST00000538809 MPHOSPH6Q99547 160 aaKnown RBP17.42■□□□□ 0.38
RAB40B-202ENST00000538809 TBX21Q9UL17 535 aa17.42■□□□□ 0.38
RAB40B-202ENST00000538809 MRPL11Q9Y3B7 192 aaKnown RBP17.42■□□□□ 0.38
RAB40B-202ENST00000538809 TRIP12Q14669 1992 aaPredicted RBP17.42■□□□□ 0.38
RAB40B-202ENST00000538809 RBM47A0AV96 593 aaKnown RBP17.41■□□□□ 0.38
RAB40B-202ENST00000538809 ZEB2O60315 1214 aa17.41■□□□□ 0.38
RAB40B-202ENST00000538809 EPHB4P54760 987 aa17.41■□□□□ 0.38
RAB40B-202ENST00000538809 PSMC6P62333 389 aa17.41■□□□□ 0.38
RAB40B-202ENST00000538809 COL9A3Q14050 684 aaPredicted RBP17.41■□□□□ 0.38
RAB40B-202ENST00000538809 PPP2R5BQ15173 497 aa17.41■□□□□ 0.38
RAB40B-202ENST00000538809 NECTIN1Q15223 517 aa17.41■□□□□ 0.38
RAB40B-202ENST00000538809 FAM126BQ8IXS8 530 aa17.41■□□□□ 0.38
RAB40B-202ENST00000538809 RGS22Q8NE09 1264 aa17.41■□□□□ 0.38
RAB40B-202ENST00000538809 OR6J1Q8NGC5 347 aa17.41■□□□□ 0.38
RAB40B-202ENST00000538809 COPS5Q92905 334 aa17.41■□□□□ 0.38
RAB40B-202ENST00000538809 CCDC136Q96JN2 1154 aa17.41■□□□□ 0.38
RAB40B-202ENST00000538809 AMNQ9BXJ7 453 aa17.41■□□□□ 0.38
RAB40B-202ENST00000538809 ANO2Q9NQ90 1003 aa17.41■□□□□ 0.38
RAB40B-202ENST00000538809 GPHNQ9NQX3 736 aaPredicted RBP17.41■□□□□ 0.38
RAB40B-202ENST00000538809 Q9Y3F1 56 aa17.41■□□□□ 0.38
RAB40B-202ENST00000538809 OPLAHO14841 1288 aa17.4■□□□□ 0.38
RAB40B-202ENST00000538809 ZBTB5O15062 677 aa17.4■□□□□ 0.38
RAB40B-202ENST00000538809 CFBP00751 764 aa17.4■□□□□ 0.38
RAB40B-202ENST00000538809 FPGSQ05932 587 aa17.4■□□□□ 0.38
RAB40B-202ENST00000538809 DEFB123Q8N688 67 aa17.4■□□□□ 0.38
RAB40B-202ENST00000538809 IGDCC4Q8TDY8 1250 aa17.4■□□□□ 0.38
RAB40B-202ENST00000538809 MTMR8Q96EF0 704 aa17.4■□□□□ 0.38
RAB40B-202ENST00000538809 PIGSQ96S52 555 aa17.4■□□□□ 0.38
RAB40B-202ENST00000538809 MYL10Q9BUA6 226 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms