RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 ABHD16BQ9H3Z7 469 aa11.28□□□□□ -0.6
SSBP3-215ENST00000533946 BCAS3Q9H6U6 928 aa11.28□□□□□ -0.6
SSBP3-215ENST00000533946 PRDM5Q9NQX1 630 aaPredicted RBP11.28□□□□□ -0.6
SSBP3-215ENST00000533946 FBXO40Q9UH90 709 aa11.28□□□□□ -0.6
SSBP3-215ENST00000533946 NRBP1Q9UHY1 535 aa11.28□□□□□ -0.6
SSBP3-215ENST00000533946 CTNNA3Q9UI47 895 aa11.28□□□□□ -0.6
SSBP3-215ENST00000533946 RAD50Q92878 1312 aa11.28□□□□□ -0.6
SSBP3-215ENST00000533946 hCG_1642624A0A1W2PR95 340 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 IFIT3O14879 490 aaKnown RBP11.27□□□□□ -0.61
SSBP3-215ENST00000533946 SORBS3O60504 671 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 FDX1P10109 184 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 CPA1P15085 419 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 GJA9P57773 515 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 TNFAIP2Q03169 654 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 FAAP100Q0VG06 881 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 TROAPQ12815 778 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 NECTIN1Q15223 517 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 TKFCQ3LXA3 575 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 IFIT1BQ5T764 474 aaKnown RBP11.27□□□□□ -0.61
SSBP3-215ENST00000533946 RNF207Q6ZRF8 634 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 IQCA1Q86XH1 822 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 IL31RAQ8NI17 732 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 SYTL5Q8TDW5 730 aaPredicted RBP11.27□□□□□ -0.61
SSBP3-215ENST00000533946 MORC4Q8TE76 937 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 PIGSQ96S52 555 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 UBE2OQ9C0C9 1292 aaKnown RBP11.27□□□□□ -0.61
SSBP3-215ENST00000533946 LY9Q9HBG7 655 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 TELO2Q9Y4R8 837 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 U3KPZ7 1027 aaPredicted RBP11.27□□□□□ -0.61
SSBP3-215ENST00000533946 UMODL1Q5DID0 1318 aa11.27□□□□□ -0.61
SSBP3-215ENST00000533946 KLRF2D3W0D1 207 aa11.26□□□□□ -0.61
SSBP3-215ENST00000533946 PLEKHA8P1O95397 391 aa11.26□□□□□ -0.61
SSBP3-215ENST00000533946 PARP1P09874 1014 aaKnown RBP11.26□□□□□ -0.61
SSBP3-215ENST00000533946 HOXA13P31271 388 aaPredicted RBP11.26□□□□□ -0.61
SSBP3-215ENST00000533946 GRM4Q14833 912 aa11.26□□□□□ -0.61
SSBP3-215ENST00000533946 SHHQ15465 462 aa11.26□□□□□ -0.61
SSBP3-215ENST00000533946 ADCK5Q3MIX3 580 aa11.26□□□□□ -0.61
SSBP3-215ENST00000533946 GNASQ5JWF2 1037 aa11.26□□□□□ -0.61
SSBP3-215ENST00000533946 CREB3L3Q68CJ9 461 aa11.26□□□□□ -0.61
SSBP3-215ENST00000533946 KIAA1211Q6ZU35 1233 aa11.26□□□□□ -0.61
SSBP3-215ENST00000533946 NOL8Q76FK4 1167 aaKnown RBP11.26□□□□□ -0.61
SSBP3-215ENST00000533946 CENPQQ7L2Z9 268 aaPredicted RBP11.26□□□□□ -0.61
SSBP3-215ENST00000533946 MSL3Q8N5Y2 521 aaKnown RBP11.26□□□□□ -0.61
SSBP3-215ENST00000533946 GPKOWQ92917 476 aaPredicted RBP eCLIP11.26□□□□□ -0.611e-8■■□□□ 12.3
SSBP3-215ENST00000533946 MTMR8Q96EF0 704 aa11.26□□□□□ -0.61
SSBP3-215ENST00000533946 UBAC1Q9BSL1 405 aa11.26□□□□□ -0.61
SSBP3-215ENST00000533946 DOCK5Q9H7D0 1870 aa11.25□□□□□ -0.61
SSBP3-215ENST00000533946 ADAMTS3O15072 1205 aa11.25□□□□□ -0.61
SSBP3-215ENST00000533946 DHX16O60231 1041 aaKnown RBP11.25□□□□□ -0.61
SSBP3-215ENST00000533946 EDNRBP24530 442 aa11.25□□□□□ -0.61
SSBP3-215ENST00000533946 BMP8BP34820 402 aa11.25□□□□□ -0.61
SSBP3-215ENST00000533946 CDK7P50613 346 aa11.25□□□□□ -0.61
SSBP3-215ENST00000533946 TMEM67Q5HYA8 995 aa11.25□□□□□ -0.61
SSBP3-215ENST00000533946 PPP4R3BQ5MIZ7 849 aa11.25□□□□□ -0.61
SSBP3-215ENST00000533946 GPATCH4Q5T3I0 446 aaKnown RBP11.25□□□□□ -0.61
SSBP3-215ENST00000533946 C16orf59Q7L2K0 433 aa11.25□□□□□ -0.61
SSBP3-215ENST00000533946 RNF180Q86T96 592 aa11.25□□□□□ -0.61
SSBP3-215ENST00000533946 TLK2Q86UE8 772 aa11.25□□□□□ -0.61
SSBP3-215ENST00000533946 HOMER1Q86YM7 354 aa11.25□□□□□ -0.61
SSBP3-215ENST00000533946 RUFY2Q8WXA3 655 aa11.25□□□□□ -0.61
SSBP3-215ENST00000533946 VWCEQ96DN2 955 aa11.25□□□□□ -0.61
SSBP3-215ENST00000533946 TRPV6Q9H1D0 765 aa11.25□□□□□ -0.61
SSBP3-215ENST00000533946 WDR19Q8NEZ3 1342 aa11.25□□□□□ -0.61
SSBP3-215ENST00000533946 ASB14A6NK59 587 aa11.24□□□□□ -0.61
SSBP3-215ENST00000533946 PRC1O43663 620 aa11.24□□□□□ -0.61
SSBP3-215ENST00000533946 DTNBO60941 627 aa11.24□□□□□ -0.61
SSBP3-215ENST00000533946 RGS20O76081 388 aa11.24□□□□□ -0.61
SSBP3-215ENST00000533946 CAPN2P17655 700 aa11.24□□□□□ -0.61
SSBP3-215ENST00000533946 FSCN1Q16658 493 aaKnown RBP11.24□□□□□ -0.61
SSBP3-215ENST00000533946 LY6KQ17RY6 165 aa11.24□□□□□ -0.61
SSBP3-215ENST00000533946 ASPRV1Q53RT3 343 aa11.24□□□□□ -0.61
SSBP3-215ENST00000533946 BMP2KLQ5H9B9 411 aa11.24□□□□□ -0.61
SSBP3-215ENST00000533946 FAM109BQ6ICB4 259 aaPredicted RBP11.24□□□□□ -0.61
SSBP3-215ENST00000533946 FBXO11Q86XK2 927 aa11.24□□□□□ -0.61
SSBP3-215ENST00000533946 WDR11Q9BZH6 1224 aa11.24□□□□□ -0.61
SSBP3-215ENST00000533946 CNNM2Q9H8M5 875 aa11.24□□□□□ -0.61
SSBP3-215ENST00000533946 ANO2Q9NQ90 1003 aa11.24□□□□□ -0.61
SSBP3-215ENST00000533946 STARD7Q9NQZ5 370 aa11.24□□□□□ -0.61
SSBP3-215ENST00000533946 MYH7BA7E2Y1 1941 aa11.24□□□□□ -0.61
SSBP3-215ENST00000533946 KIAA1217Q5T5P2 1943 aa11.24□□□□□ -0.61
SSBP3-215ENST00000533946 VCANP13611 3396 aa11.23□□□□□ -0.61
SSBP3-215ENST00000533946 RBM47A0AV96 593 aaKnown RBP11.23□□□□□ -0.61
SSBP3-215ENST00000533946 SH2B2O14492 632 aaPredicted RBP11.23□□□□□ -0.61
SSBP3-215ENST00000533946 CFBP00751 764 aa11.23□□□□□ -0.61
SSBP3-215ENST00000533946 EIF2AK2P19525 551 aaKnown RBP11.23□□□□□ -0.61
SSBP3-215ENST00000533946 CST5P28325 142 aaPredicted RBP11.23□□□□□ -0.61
SSBP3-215ENST00000533946 NKX3-2P78367 333 aa11.23□□□□□ -0.61
SSBP3-215ENST00000533946 WTAPQ15007 396 aa11.23□□□□□ -0.61
SSBP3-215ENST00000533946 CCDC62Q6P9F0 684 aa11.23□□□□□ -0.61
SSBP3-215ENST00000533946 SEPT14Q6ZU15 432 aa11.23□□□□□ -0.61
SSBP3-215ENST00000533946 TDHQ8IZJ6 230 aa11.23□□□□□ -0.61
SSBP3-215ENST00000533946 ZNF654Q8IZM8 581 aa11.23□□□□□ -0.61
SSBP3-215ENST00000533946 SRBD1Q8N5C6 995 aaKnown RBP11.23□□□□□ -0.61
SSBP3-215ENST00000533946 NCOA7Q8NI08 942 aa11.23□□□□□ -0.61
SSBP3-215ENST00000533946 NUP133Q8WUM0 1156 aa11.23□□□□□ -0.61
SSBP3-215ENST00000533946 VTI1AQ96AJ9 217 aa11.23□□□□□ -0.61
SSBP3-215ENST00000533946 TSEN34Q9BSV6 310 aaKnown RBP11.23□□□□□ -0.61
SSBP3-215ENST00000533946 RIOX1Q9H6W3 641 aa11.23□□□□□ -0.61
SSBP3-215ENST00000533946 TBX21Q9UL17 535 aa11.23□□□□□ -0.61
SSBP3-215ENST00000533946 BRPF3Q9ULD4 1205 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms