RNA–Protein interactions for RNA: ENST00000532771.5

SYVN1-214, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 709 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-214ENST00000532771 TMEM39AQ9NV64 488 aa11.16□□□□□ -0.62
SYVN1-214ENST00000532771 TBX21Q9UL17 535 aa11.16□□□□□ -0.62
SYVN1-214ENST00000532771 DYNC1LI2O43237 492 aaPredicted RBP11.15□□□□□ -0.62
SYVN1-214ENST00000532771 ZEB2O60315 1214 aa11.15□□□□□ -0.62
SYVN1-214ENST00000532771 CABYRO75952 493 aa11.15□□□□□ -0.62
SYVN1-214ENST00000532771 PARP1P09874 1014 aaKnown RBP11.15□□□□□ -0.62
SYVN1-214ENST00000532771 PTGS1P23219 599 aa11.15□□□□□ -0.62
SYVN1-214ENST00000532771 SEC23AQ15436 765 aa11.15□□□□□ -0.62
SYVN1-214ENST00000532771 USH1GQ495M9 461 aa11.15□□□□□ -0.62
SYVN1-214ENST00000532771 DUSP28Q4G0W2 176 aa11.15□□□□□ -0.62
SYVN1-214ENST00000532771 IFIT1BQ5T764 474 aaKnown RBP11.15□□□□□ -0.62
SYVN1-214ENST00000532771 CXCL17Q6UXB2 119 aa11.15□□□□□ -0.62
SYVN1-214ENST00000532771 KIAA1211Q6ZU35 1233 aa11.15□□□□□ -0.62
SYVN1-214ENST00000532771 Q7L0L9 218 aa11.15□□□□□ -0.62
SYVN1-214ENST00000532771 FAM126BQ8IXS8 530 aa11.15□□□□□ -0.62
SYVN1-214ENST00000532771 ADGRF4Q8IZF3 695 aa11.15□□□□□ -0.62
SYVN1-214ENST00000532771 RGS22Q8NE09 1264 aa11.15□□□□□ -0.62
SYVN1-214ENST00000532771 DNERQ8NFT8 737 aa11.15□□□□□ -0.62
SYVN1-214ENST00000532771 MAF1Q9H063 256 aa11.15□□□□□ -0.62
SYVN1-214ENST00000532771 MTMR10Q9NXD2 777 aa11.15□□□□□ -0.62
SYVN1-214ENST00000532771 LAMA3Q16787 3333 aa11.15□□□□□ -0.62
SYVN1-214ENST00000532771 DNAH12Q6ZR08 3092 aa11.14□□□□□ -0.63
SYVN1-214ENST00000532771 RBM47A0AV96 593 aaKnown RBP11.14□□□□□ -0.63
SYVN1-214ENST00000532771 SGSM2O43147 1006 aa11.14□□□□□ -0.63
SYVN1-214ENST00000532771 TIMP1P01033 207 aa11.14□□□□□ -0.63
SYVN1-214ENST00000532771 CYP21A2P08686 494 aa11.14□□□□□ -0.63
SYVN1-214ENST00000532771 EDNRBP24530 442 aa11.14□□□□□ -0.63
SYVN1-214ENST00000532771 EPHB4P54760 987 aa11.14□□□□□ -0.63
SYVN1-214ENST00000532771 PTH1RQ03431 593 aa11.14□□□□□ -0.63
SYVN1-214ENST00000532771 FPGSQ05932 587 aa11.14□□□□□ -0.63
SYVN1-214ENST00000532771 TRDNQ13061 729 aa11.14□□□□□ -0.63
SYVN1-214ENST00000532771 TMEM63BQ5T3F8 832 aa11.14□□□□□ -0.63
SYVN1-214ENST00000532771 FAM109BQ6ICB4 259 aaPredicted RBP11.14□□□□□ -0.63
SYVN1-214ENST00000532771 PPP4R3CPQ6ZMV5 832 aa11.14□□□□□ -0.63
SYVN1-214ENST00000532771 CYB5R4Q7L1T6 521 aa11.14□□□□□ -0.63
SYVN1-214ENST00000532771 SLC43A3Q8NBI5 491 aa11.14□□□□□ -0.63
SYVN1-214ENST00000532771 MPHOSPH6Q99547 160 aaKnown RBP11.14□□□□□ -0.63
SYVN1-214ENST00000532771 WDR11Q9BZH6 1224 aa11.14□□□□□ -0.63
SYVN1-214ENST00000532771 U3KPZ7 1027 aaPredicted RBP11.14□□□□□ -0.63
SYVN1-214ENST00000532771 SZT2Q5T011 3432 aa11.14□□□□□ -0.63
SYVN1-214ENST00000532771 ABCB11O95342 1321 aa11.13□□□□□ -0.63
SYVN1-214ENST00000532771 TLR3O15455 904 aaKnown RBP11.13□□□□□ -0.63
SYVN1-214ENST00000532771 PDE4DQ08499 809 aa11.13□□□□□ -0.63
SYVN1-214ENST00000532771 QRICH1Q2TAL8 776 aa11.13□□□□□ -0.63
SYVN1-214ENST00000532771 STAG2Q8N3U4 1231 aa11.13□□□□□ -0.63
SYVN1-214ENST00000532771 SEZ6LQ9BYH1 1024 aa11.13□□□□□ -0.63
SYVN1-214ENST00000532771 JMJD4Q9H9V9 463 aa11.13□□□□□ -0.63
SYVN1-214ENST00000532771 GRIN2DO15399 1336 aa11.12□□□□□ -0.63
SYVN1-214ENST00000532771 B4DLN1 442 aa11.12□□□□□ -0.63
SYVN1-214ENST00000532771 NKRFO15226 690 aaKnown RBP eCLIP11.12□□□□□ -0.63
SYVN1-214ENST00000532771 DHX16O60231 1041 aaKnown RBP11.12□□□□□ -0.63
SYVN1-214ENST00000532771 CD4P01730 458 aa11.12□□□□□ -0.63
SYVN1-214ENST00000532771 MRPL12P52815 198 aaKnown RBP11.12□□□□□ -0.63
SYVN1-214ENST00000532771 ITGA7Q13683 1181 aa11.12□□□□□ -0.63
SYVN1-214ENST00000532771 PPP2R5BQ15173 497 aa11.12□□□□□ -0.63
SYVN1-214ENST00000532771 MFSD5Q6N075 450 aa11.12□□□□□ -0.63
SYVN1-214ENST00000532771 FBXO11Q86XK2 927 aa11.12□□□□□ -0.63
SYVN1-214ENST00000532771 MCF2L2Q86YR7 1114 aa11.12□□□□□ -0.63
SYVN1-214ENST00000532771 SYTL5Q8TDW5 730 aaPredicted RBP11.12□□□□□ -0.63
SYVN1-214ENST00000532771 SCFD2Q8WU76 684 aa11.12□□□□□ -0.63
SYVN1-214ENST00000532771 TBC1D5Q92609 795 aa11.12□□□□□ -0.63
SYVN1-214ENST00000532771 MTMR8Q96EF0 704 aa11.12□□□□□ -0.63
SYVN1-214ENST00000532771 RNPC3Q96LT9 517 aaKnown RBP11.12□□□□□ -0.63
SYVN1-214ENST00000532771 STXBP5LQ9Y2K9 1186 aa11.12□□□□□ -0.63
SYVN1-214ENST00000532771 MRPL11Q9Y3B7 192 aaKnown RBP11.12□□□□□ -0.63
SYVN1-214ENST00000532771 TAF6LQ9Y6J9 622 aa11.12□□□□□ -0.63
SYVN1-214ENST00000532771 PALM3A6NDB9 673 aaPredicted RBP11.11□□□□□ -0.63
SYVN1-214ENST00000532771 KLRF2D3W0D1 207 aa11.11□□□□□ -0.63
SYVN1-214ENST00000532771 E7EWF7 191 aa11.11□□□□□ -0.63
SYVN1-214ENST00000532771 IFIT3O14879 490 aaKnown RBP11.11□□□□□ -0.63
SYVN1-214ENST00000532771 CPT1AP50416 773 aa11.11□□□□□ -0.63
SYVN1-214ENST00000532771 SMAD3P84022 425 aaKnown RBP11.11□□□□□ -0.63
SYVN1-214ENST00000532771 PPIGQ13427 754 aaKnown RBP eCLIP11.11□□□□□ -0.639e-7■■□□□ 14.5
SYVN1-214ENST00000532771 GRM4Q14833 912 aa11.11□□□□□ -0.63
SYVN1-214ENST00000532771 STOX1Q6ZVD7 989 aa11.11□□□□□ -0.63
SYVN1-214ENST00000532771 RALYLQ86SE5 291 aaKnown RBP11.11□□□□□ -0.63
SYVN1-214ENST00000532771 NCOA7Q8NI08 942 aa11.11□□□□□ -0.63
SYVN1-214ENST00000532771 NSUN6Q8TEA1 469 aaKnown RBP11.11□□□□□ -0.63
SYVN1-214ENST00000532771 MAP4K1Q92918 833 aa11.11□□□□□ -0.63
SYVN1-214ENST00000532771 TAAR1Q96RJ0 339 aa11.11□□□□□ -0.63
SYVN1-214ENST00000532771 AMNQ9BXJ7 453 aa11.11□□□□□ -0.63
SYVN1-214ENST00000532771 VAT1LQ9HCJ6 419 aa11.11□□□□□ -0.63
SYVN1-214ENST00000532771 POLR3EQ9NVU0 708 aa11.11□□□□□ -0.63
SYVN1-214ENST00000532771 COL20A1Q9P218 1284 aa11.11□□□□□ -0.63
SYVN1-214ENST00000532771 MAD2L2Q9UI95 211 aa11.11□□□□□ -0.63
SYVN1-214ENST00000532771 ERICH2A1L162 156 aa11.1□□□□□ -0.63
SYVN1-214ENST00000532771 OPLAHO14841 1288 aa11.1□□□□□ -0.63
SYVN1-214ENST00000532771 ZBTB5O15062 677 aa11.1□□□□□ -0.63
SYVN1-214ENST00000532771 PPP1R11O60927 126 aaPredicted RBP11.1□□□□□ -0.63
SYVN1-214ENST00000532771 PSMC6P62333 389 aa11.1□□□□□ -0.63
SYVN1-214ENST00000532771 PURAQ00577 322 aaKnown RBP11.1□□□□□ -0.63
SYVN1-214ENST00000532771 GHRHRQ02643 423 aa11.1□□□□□ -0.63
SYVN1-214ENST00000532771 TTLL4Q14679 1199 aa11.1□□□□□ -0.63
SYVN1-214ENST00000532771 SART3Q15020 963 aaKnown RBP11.1□□□□□ -0.63
SYVN1-214ENST00000532771 SLC35G1Q2M3R5 365 aa11.1□□□□□ -0.63
SYVN1-214ENST00000532771 BRDTQ58F21 947 aaPredicted RBP11.1□□□□□ -0.63
SYVN1-214ENST00000532771 ZNF697Q5TEC3 545 aa11.1□□□□□ -0.63
SYVN1-214ENST00000532771 TMEM199Q8N511 208 aa11.1□□□□□ -0.63
SYVN1-214ENST00000532771 OR6J1Q8NGC5 347 aa11.1□□□□□ -0.63
SYVN1-214ENST00000532771 GUCD1Q96NT3 240 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms