RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 RAD50Q92878 1312 aa12.4□□□□□ -0.42
DDX56-212ENST00000485367 KIF20AO95235 890 aa12.4□□□□□ -0.42
DDX56-212ENST00000485367 BRD1O95696 1058 aa12.4□□□□□ -0.42
DDX56-212ENST00000485367 PGK1P00558 417 aa12.4□□□□□ -0.42
DDX56-212ENST00000485367 ICAM1P05362 532 aa12.4□□□□□ -0.42
DDX56-212ENST00000485367 NT5C2P49902 561 aa12.4□□□□□ -0.42
DDX56-212ENST00000485367 FXR1P51114 621 aaKnown RBP eCLIP12.4□□□□□ -0.42
DDX56-212ENST00000485367 ACVR2BQ13705 512 aa12.4□□□□□ -0.42
DDX56-212ENST00000485367 FAM133AQ8N9E0 248 aa12.4□□□□□ -0.42
DDX56-212ENST00000485367 FERMT2Q96AC1 680 aa12.4□□□□□ -0.42
DDX56-212ENST00000485367 ZSCAN10Q96SZ4 725 aaPredicted RBP12.4□□□□□ -0.42
DDX56-212ENST00000485367 KRT23Q9C075 422 aa12.4□□□□□ -0.42
DDX56-212ENST00000485367 PRO3102Q9H379 93 aa12.4□□□□□ -0.42
DDX56-212ENST00000485367 KAT14Q9H8E8 782 aa12.4□□□□□ -0.42
DDX56-212ENST00000485367 ZSWIM5Q9P217 1185 aa12.4□□□□□ -0.42
DDX56-212ENST00000485367 PCDH10Q9P2E7 1040 aa12.4□□□□□ -0.42
DDX56-212ENST00000485367 FAM184BQ9ULE4 1060 aa12.4□□□□□ -0.42
DDX56-212ENST00000485367 SOWAHBA6NEL2 793 aa12.39□□□□□ -0.43
DDX56-212ENST00000485367 EPB41L2O43491 1005 aaKnown RBP12.39□□□□□ -0.43
DDX56-212ENST00000485367 GOLGA8HP0CJ92 632 aa12.39□□□□□ -0.43
DDX56-212ENST00000485367 RTP1P59025 263 aa12.39□□□□□ -0.43
DDX56-212ENST00000485367 CUL4AQ13619 759 aa12.39□□□□□ -0.43
DDX56-212ENST00000485367 PKP1Q13835 747 aa12.39□□□□□ -0.43
DDX56-212ENST00000485367 NSMFQ6X4W1 530 aa12.39□□□□□ -0.43
DDX56-212ENST00000485367 ARMCX2Q7L311 632 aa12.39□□□□□ -0.43
DDX56-212ENST00000485367 RNF180Q86T96 592 aa12.39□□□□□ -0.43
DDX56-212ENST00000485367 CCDC144CPQ8IYA2 1237 aa12.39□□□□□ -0.43
DDX56-212ENST00000485367 PNMA1Q8ND90 353 aa12.39□□□□□ -0.43
DDX56-212ENST00000485367 PIBF1Q8WXW3 757 aa12.39□□□□□ -0.43
DDX56-212ENST00000485367 IL17RAQ96F46 866 aa12.39□□□□□ -0.43
DDX56-212ENST00000485367 CNNM2Q9H8M5 875 aa12.39□□□□□ -0.43
DDX56-212ENST00000485367 ATP11BQ9Y2G3 1177 aa12.39□□□□□ -0.43
DDX56-212ENST00000485367 DNAH12Q6ZR08 3092 aa12.38□□□□□ -0.43
DDX56-212ENST00000485367 LETM1O95202 739 aaPredicted RBP12.38□□□□□ -0.43
DDX56-212ENST00000485367 PTMAP06454 111 aaKnown RBP12.38□□□□□ -0.43
DDX56-212ENST00000485367 SNHG28P0DPA3 235 aa12.38□□□□□ -0.43
DDX56-212ENST00000485367 MAGEA10P43363 369 aaPredicted RBP12.38□□□□□ -0.43
DDX56-212ENST00000485367 ANAPC15P60006 121 aa12.38□□□□□ -0.43
DDX56-212ENST00000485367 PTH1RQ03431 593 aa12.38□□□□□ -0.43
DDX56-212ENST00000485367 SLC39A5Q6ZMH5 540 aa12.38□□□□□ -0.43
DDX56-212ENST00000485367 ENAHQ8N8S7 591 aaPredicted RBP12.38□□□□□ -0.43
DDX56-212ENST00000485367 ANKS1AQ92625 1134 aa12.38□□□□□ -0.43
DDX56-212ENST00000485367 UBAC1Q9BSL1 405 aa12.38□□□□□ -0.43
DDX56-212ENST00000485367 ABHD16BQ9H3Z7 469 aa12.38□□□□□ -0.43
DDX56-212ENST00000485367 CYP39A1Q9NYL5 469 aa12.38□□□□□ -0.43
DDX56-212ENST00000485367 RANBP2P49792 3224 aaKnown RBP12.38□□□□□ -0.43
DDX56-212ENST00000485367 TNKSO95271 1327 aa12.38□□□□□ -0.43
DDX56-212ENST00000485367 CCDC144BQ3MJ40 725 aa12.38□□□□□ -0.43
DDX56-212ENST00000485367 GPATCH4Q5T3I0 446 aaKnown RBP12.38□□□□□ -0.43
DDX56-212ENST00000485367 TAF3Q5VWG9 929 aa12.38□□□□□ -0.43
DDX56-212ENST00000485367 GDF15Q99988 308 aa12.38□□□□□ -0.43
DDX56-212ENST00000485367 UBA5Q9GZZ9 404 aa12.38□□□□□ -0.43
DDX56-212ENST00000485367 CPVLQ9H3G5 476 aa12.38□□□□□ -0.43
DDX56-212ENST00000485367 PHF24Q9UPV7 400 aa12.38□□□□□ -0.43
DDX56-212ENST00000485367 SYNRGQ9UMZ2 1314 aa12.37□□□□□ -0.43
DDX56-212ENST00000485367 ASB14A6NK59 587 aa12.37□□□□□ -0.43
DDX56-212ENST00000485367 TRDNQ13061 729 aa12.37□□□□□ -0.43
DDX56-212ENST00000485367 PURBQ96QR8 312 aaKnown RBP12.37□□□□□ -0.43
DDX56-212ENST00000485367 GTPBP4Q9BZE4 634 aaKnown RBP12.37□□□□□ -0.43
DDX56-212ENST00000485367 U3KPZ7 1027 aaPredicted RBP12.37□□□□□ -0.43
DDX56-212ENST00000485367 NFIBO00712 420 aa12.36□□□□□ -0.43
DDX56-212ENST00000485367 SGSM2O43147 1006 aa12.36□□□□□ -0.43
DDX56-212ENST00000485367 ADAMTS4O75173 837 aa12.36□□□□□ -0.43
DDX56-212ENST00000485367 DUSP11O75319 330 aaKnown RBP12.36□□□□□ -0.43
DDX56-212ENST00000485367 TPM3P06753 285 aa12.36□□□□□ -0.43
DDX56-212ENST00000485367 BMP8BP34820 402 aa12.36□□□□□ -0.43
DDX56-212ENST00000485367 MDM2Q00987 491 aaPredicted RBP12.36□□□□□ -0.43
DDX56-212ENST00000485367 BAATQ14032 418 aaPredicted RBP12.36□□□□□ -0.43
DDX56-212ENST00000485367 TRIM60Q495X7 471 aa12.36□□□□□ -0.43
DDX56-212ENST00000485367 IFIT1BQ5T764 474 aaKnown RBP12.36□□□□□ -0.43
DDX56-212ENST00000485367 NOL8Q76FK4 1167 aaKnown RBP12.36□□□□□ -0.43
DDX56-212ENST00000485367 CYB5R4Q7L1T6 521 aa12.36□□□□□ -0.43
DDX56-212ENST00000485367 TMEM87AQ8NBN3 555 aa12.36□□□□□ -0.43
DDX56-212ENST00000485367 UBE2OQ9C0C9 1292 aaKnown RBP12.36□□□□□ -0.43
DDX56-212ENST00000485367 PRKAG2Q9UGJ0 569 aa12.36□□□□□ -0.43
DDX56-212ENST00000485367 PNMA2Q9UL42 364 aa12.36□□□□□ -0.43
DDX56-212ENST00000485367 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.36□□□□□ -0.43
DDX56-212ENST00000485367 ASTN1O14525 1302 aa12.36□□□□□ -0.43
DDX56-212ENST00000485367 LCTP09848 1927 aa12.36□□□□□ -0.43
DDX56-212ENST00000485367 A0A1W2PPC1 479 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 PTPDC1A2A3K4 754 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 ADCY6O43306 1168 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 DHX16O60231 1041 aaKnown RBP12.35□□□□□ -0.43
DDX56-212ENST00000485367 CYP21A2P08686 494 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 CALML3P27482 149 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 ASPRV1Q53RT3 343 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 CLEC4DQ8WXI8 215 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 TMX3Q96JJ7 454 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 LBHD1Q9BQE6 289 aaPredicted RBP12.35□□□□□ -0.43
DDX56-212ENST00000485367 KATNBL1Q9H079 304 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 SPC25Q9HBM1 224 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 PRDM5Q9NQX1 630 aaPredicted RBP12.35□□□□□ -0.43
DDX56-212ENST00000485367 SPTLC3Q9NUV7 552 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 A0A1W2PQ45 241 aaPredicted RBP12.35□□□□□ -0.43
DDX56-212ENST00000485367 A0A1W2PQY0 241 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 MYADML2A6NDP7 307 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 PARP1P09874 1014 aaKnown RBP12.35□□□□□ -0.43
DDX56-212ENST00000485367 C6orf222P0C671 652 aaPredicted RBP12.35□□□□□ -0.43
DDX56-212ENST00000485367 ACLYP53396 1101 aa12.35□□□□□ -0.43
DDX56-212ENST00000485367 IRX5P78411 483 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms