RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 DYNC1LI2O43237 492 aaPredicted RBP17.85■□□□□ 0.45
CDK9-203ENST00000480353 BEX3Q00994 111 aa17.85■□□□□ 0.45
CDK9-203ENST00000480353 TRAF1Q13077 416 aa17.85■□□□□ 0.45
CDK9-203ENST00000480353 SEC23AQ15436 765 aa17.85■□□□□ 0.45
CDK9-203ENST00000480353 CHST3Q7LGC8 479 aa17.85■□□□□ 0.45
CDK9-203ENST00000480353 DNERQ8NFT8 737 aa17.85■□□□□ 0.45
CDK9-203ENST00000480353 ESYT1Q9BSJ8 1104 aa17.85■□□□□ 0.45
CDK9-203ENST00000480353 AMNQ9BXJ7 453 aa17.85■□□□□ 0.45
CDK9-203ENST00000480353 KATNBL1Q9H079 304 aa17.85■□□□□ 0.45
CDK9-203ENST00000480353 TMEM39AQ9NV64 488 aa17.85■□□□□ 0.45
CDK9-203ENST00000480353 ASTN1O14525 1302 aa17.84■□□□□ 0.45
CDK9-203ENST00000480353 ELP1O95163 1332 aa17.84■□□□□ 0.45
CDK9-203ENST00000480353 A0A0U1RQG5 324 aaPredicted RBP17.84■□□□□ 0.45
CDK9-203ENST00000480353 TLR3O15455 904 aaKnown RBP17.84■□□□□ 0.45
CDK9-203ENST00000480353 ADCY6O43306 1168 aa17.84■□□□□ 0.45
CDK9-203ENST00000480353 RAG1P15918 1043 aa17.84■□□□□ 0.45
CDK9-203ENST00000480353 FSCN1Q16658 493 aaKnown RBP17.84■□□□□ 0.45
CDK9-203ENST00000480353 BRDTQ58F21 947 aaPredicted RBP17.84■□□□□ 0.45
CDK9-203ENST00000480353 NFXL1Q6ZNB6 911 aa17.84■□□□□ 0.45
CDK9-203ENST00000480353 HOMER1Q86YM7 354 aa17.84■□□□□ 0.45
CDK9-203ENST00000480353 STAG2Q8N3U4 1231 aa17.84■□□□□ 0.45
CDK9-203ENST00000480353 WDR11Q9BZH6 1224 aa17.84■□□□□ 0.45
CDK9-203ENST00000480353 JMJD4Q9H9V9 463 aa17.84■□□□□ 0.45
CDK9-203ENST00000480353 PDLIM7Q9NR12 457 aa17.84■□□□□ 0.45
CDK9-203ENST00000480353 PDGFCQ9NRA1 345 aa17.84■□□□□ 0.45
CDK9-203ENST00000480353 DDX49Q9Y6V7 483 aaKnown RBP17.84■□□□□ 0.45
CDK9-203ENST00000480353 SMPD1P17405 629 aa17.83■□□□□ 0.44
CDK9-203ENST00000480353 BMP2KLQ5H9B9 411 aa17.83■□□□□ 0.44
CDK9-203ENST00000480353 RNF20Q5VTR2 975 aa17.83■□□□□ 0.44
CDK9-203ENST00000480353 TAPT1Q6NXT6 567 aa17.83■□□□□ 0.44
CDK9-203ENST00000480353 RGS22Q8NE09 1264 aa17.83■□□□□ 0.44
CDK9-203ENST00000480353 MORC4Q8TE76 937 aa17.83■□□□□ 0.44
CDK9-203ENST00000480353 MAF1Q9H063 256 aa17.83■□□□□ 0.44
CDK9-203ENST00000480353 MAD2L2Q9UI95 211 aa17.83■□□□□ 0.44
CDK9-203ENST00000480353 Q9Y3F1 56 aa17.83■□□□□ 0.44
CDK9-203ENST00000480353 LTBP2Q14767 1821 aa17.83■□□□□ 0.44
CDK9-203ENST00000480353 DNAH12Q6ZR08 3092 aa17.83■□□□□ 0.44
CDK9-203ENST00000480353 CCDC69A6NI79 296 aa17.82■□□□□ 0.44
CDK9-203ENST00000480353 CABYRO75952 493 aa17.82■□□□□ 0.44
CDK9-203ENST00000480353 CFBP00751 764 aa17.82■□□□□ 0.44
CDK9-203ENST00000480353 MCM5P33992 734 aa17.82■□□□□ 0.44
CDK9-203ENST00000480353 IRX5P78411 483 aaPredicted RBP17.82■□□□□ 0.44
CDK9-203ENST00000480353 GRM4Q14833 912 aa17.82■□□□□ 0.44
CDK9-203ENST00000480353 PPP2R5BQ15173 497 aa17.82■□□□□ 0.44
CDK9-203ENST00000480353 ARHGEF16Q5VV41 709 aa17.82■□□□□ 0.44
CDK9-203ENST00000480353 CCSAPQ6IQ19 270 aaPredicted RBP17.82■□□□□ 0.44
CDK9-203ENST00000480353 OR6J1Q8NGC5 347 aa17.82■□□□□ 0.44
CDK9-203ENST00000480353 CTCFLQ8NI51 663 aaPredicted RBP17.82■□□□□ 0.44
CDK9-203ENST00000480353 BADQ92934 168 aa17.82■□□□□ 0.44
CDK9-203ENST00000480353 TOX2Q96NM4 488 aa17.82■□□□□ 0.44
CDK9-203ENST00000480353 GPHNQ9NQX3 736 aaPredicted RBP17.82■□□□□ 0.44
CDK9-203ENST00000480353 GNEQ9Y223 722 aaKnown RBP17.82■□□□□ 0.44
CDK9-203ENST00000480353 ZBTB5O15062 677 aa17.81■□□□□ 0.44
CDK9-203ENST00000480353 PRC1O43663 620 aa17.81■□□□□ 0.44
CDK9-203ENST00000480353 KIF5BP33176 963 aa17.81■□□□□ 0.44
CDK9-203ENST00000480353 CPT1AP50416 773 aa17.81■□□□□ 0.44
CDK9-203ENST00000480353 DUSP28Q4G0W2 176 aa17.81■□□□□ 0.44
CDK9-203ENST00000480353 STOX1Q6ZVD7 989 aa17.81■□□□□ 0.44
CDK9-203ENST00000480353 SH3RF1Q7Z6J0 888 aa17.81■□□□□ 0.44
CDK9-203ENST00000480353 NSUN6Q8TEA1 469 aaKnown RBP17.81■□□□□ 0.44
CDK9-203ENST00000480353 SCFD2Q8WU76 684 aa17.81■□□□□ 0.44
CDK9-203ENST00000480353 LSG1Q9H089 658 aaKnown RBP17.81■□□□□ 0.44
CDK9-203ENST00000480353 PCDHA1Q9Y5I3 950 aa17.81■□□□□ 0.44
CDK9-203ENST00000480353 TRIM43BA6NCK2 446 aa17.8■□□□□ 0.44
CDK9-203ENST00000480353 PALM3A6NDB9 673 aaPredicted RBP17.8■□□□□ 0.44
CDK9-203ENST00000480353 ARVCFO00192 962 aa17.8■□□□□ 0.44
CDK9-203ENST00000480353 NKRFO15226 690 aaKnown RBP eCLIP17.8■□□□□ 0.44
CDK9-203ENST00000480353 CDC45O75419 566 aa17.8■□□□□ 0.44
CDK9-203ENST00000480353 TTLL4Q14679 1199 aa17.8■□□□□ 0.44
CDK9-203ENST00000480353 LRIT3Q3SXY7 679 aa17.8■□□□□ 0.44
CDK9-203ENST00000480353 CREB3L3Q68CJ9 461 aa17.8■□□□□ 0.44
CDK9-203ENST00000480353 CXCL17Q6UXB2 119 aa17.8■□□□□ 0.44
CDK9-203ENST00000480353 ANKRD33Q7Z3H0 272 aa17.8■□□□□ 0.44
CDK9-203ENST00000480353 MB21D2Q8IYB1 491 aaPredicted RBP17.8■□□□□ 0.44
CDK9-203ENST00000480353 TMTC2Q8N394 836 aa17.8■□□□□ 0.44
CDK9-203ENST00000480353 TRIM43Q96BQ3 446 aaPredicted RBP17.8■□□□□ 0.44
CDK9-203ENST00000480353 LRCH3Q96II8 777 aa17.8■□□□□ 0.44
CDK9-203ENST00000480353 RMDN3Q96TC7 470 aa17.8■□□□□ 0.44
CDK9-203ENST00000480353 POLR3EQ9NVU0 708 aa17.8■□□□□ 0.44
CDK9-203ENST00000480353 TAF6LQ9Y6J9 622 aa17.8■□□□□ 0.44
CDK9-203ENST00000480353 BAZ2BQ9UIF8 2168 aaKnown RBP17.79■□□□□ 0.44
CDK9-203ENST00000480353 SLC27A2O14975 620 aa17.79■□□□□ 0.44
CDK9-203ENST00000480353 MYL3P08590 195 aa17.79■□□□□ 0.44
CDK9-203ENST00000480353 TXNP10599 105 aaKnown RBP17.79■□□□□ 0.44
CDK9-203ENST00000480353 STXBP2Q15833 593 aa17.79■□□□□ 0.44
CDK9-203ENST00000480353 SKAP1Q86WV1 359 aa17.79■□□□□ 0.44
CDK9-203ENST00000480353 SYTL5Q8TDW5 730 aaPredicted RBP17.79■□□□□ 0.44
CDK9-203ENST00000480353 PIBF1Q8WXW3 757 aa17.79■□□□□ 0.44
CDK9-203ENST00000480353 TMEM87BQ96K49 555 aa17.79■□□□□ 0.44
CDK9-203ENST00000480353 TAAR1Q96RJ0 339 aa17.79■□□□□ 0.44
CDK9-203ENST00000480353 PIGSQ96S52 555 aa17.79■□□□□ 0.44
CDK9-203ENST00000480353 SEC63Q9UGP8 760 aaKnown RBP17.79■□□□□ 0.44
CDK9-203ENST00000480353 SOX1O00570 391 aaPredicted RBP17.78■□□□□ 0.44
CDK9-203ENST00000480353 KIAA0355O15063 1070 aa17.78■□□□□ 0.44
CDK9-203ENST00000480353 DDAH1O94760 285 aa17.78■□□□□ 0.44
CDK9-203ENST00000480353 EIF2AK2P19525 551 aaKnown RBP17.78■□□□□ 0.44
CDK9-203ENST00000480353 NKX3-2P78367 333 aa17.78■□□□□ 0.44
CDK9-203ENST00000480353 FPGSQ05932 587 aa17.78■□□□□ 0.44
CDK9-203ENST00000480353 FAAP100Q0VG06 881 aa17.78■□□□□ 0.44
CDK9-203ENST00000480353 ITGA7Q13683 1181 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms