RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 ABT1Q9ULW3 272 aaKnown RBP12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 CTAGE15A4D2H0 777 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 UNCXA6NJT0 531 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 USP17L12C9JPN9 530 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 USP17L21D6R901 530 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 IRF6O14896 467 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 KIF5CO60282 957 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 CCDC175P0C221 793 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 CTAGE8P0CG41 777 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 HSPD1P10809 573 aaKnown RBP12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 HSPA6P17066 643 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 CCT5P48643 541 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 SBK1Q52WX2 424 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 RCSD1Q6JBY9 416 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 MIGA2Q7L4E1 593 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 CTAGE6Q86UF2 777 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 IQCA1Q86XH1 822 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 CTAGE4Q8IX94 777 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 RPGRIP1Q96KN7 1286 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 LARP6Q9BRS8 491 aaKnown RBP12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 EPB41L4AQ9HCS5 686 aaPredicted RBP12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 SERPINB13Q9UIV8 391 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 ZMYM6O95789 1325 aa12.84□□□□□ -0.35
TRAPPC3-205ENST00000462715 SKOR1P84550 965 aa12.83□□□□□ -0.35
TRAPPC3-205ENST00000462715 MAP3K10Q02779 954 aa12.83□□□□□ -0.35
TRAPPC3-205ENST00000462715 ALX1Q15699 326 aa12.83□□□□□ -0.35
TRAPPC3-205ENST00000462715 SLC4A8Q2Y0W8 1093 aa12.83□□□□□ -0.35
TRAPPC3-205ENST00000462715 TLL2Q9Y6L7 1015 aa12.83□□□□□ -0.35
TRAPPC3-205ENST00000462715 BAZ2AQ9UIF9 1905 aaKnown RBP12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 LRRIQ3A6PVS8 624 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 MEFVO15553 781 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 USP2O75604 605 aaPredicted RBP12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 NEBLO76041 1014 aa12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 CPA1P15085 419 aa12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 HUNKP57058 714 aa12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 VSNL1P62760 191 aa12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 MYL5Q02045 173 aa12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 C12orf60Q5U649 245 aa12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 METTL16Q86W50 562 aaKnown RBP12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 IGSF22Q8N9C0 903 aa12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 TCP11Q8WWU5 503 aa12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 BRF1Q92994 677 aa12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 TATDN2Q93075 761 aa12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 WRNIP1Q96S55 665 aa12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 PLCD4Q9BRC7 762 aa12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 DSCC1Q9BVC3 393 aa12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 HOMER3Q9NSC5 361 aa12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 HPCAL4Q9UM19 191 aa12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 CAPN7Q9Y6W3 813 aa12.83□□□□□ -0.36
TRAPPC3-205ENST00000462715 GOLGA8KD6RF30 607 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 CLSTN1O94985 981 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 PLCD1P51178 756 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 DPCR1Q3MIW9 517 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 AP1ARQ63HQ0 302 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 SAPCD2Q86UD0 394 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 ANKRD13AQ8IZ07 590 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 OTUD6BQ8N6M0 293 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 MAB21L3Q8N8X9 362 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 KLRG1Q96E93 195 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 PANX2Q96RD6 677 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 SPATS2LQ9NUQ6 558 aaKnown RBP12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 ETAA1Q9NY74 926 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 RTEL1Q9NZ71 1219 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 SWAP70Q9UH65 585 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 SH3BP1Q9Y3L3 701 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 CTAGE9A4FU28 777 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 MINDY4BA8MYZ0 360 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 ANKRD65E5RJM6 399 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 PES1O00541 588 aaKnown RBP12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 SLC3A2P08195 630 aaKnown RBP12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 RWDD2BP57060 319 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 KIAA1328Q86T90 577 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 CCDC148Q8NFR7 591 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 COG1Q8WTW3 980 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 HHIPL1Q96JK4 782 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 CAPS2Q9BXY5 557 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 ATP6V0A4Q9HBG4 840 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 RBM8AQ9Y5S9 174 aaKnown RBP12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 CSADQ9Y600 493 aa12.82□□□□□ -0.36
TRAPPC3-205ENST00000462715 UBE2Q2LH0YL09 131 aa12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 FOXP2O15409 715 aa12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 PFKFB2O60825 505 aa12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 SERPINC1P01008 464 aa12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 CYP2D6P10635 497 aa12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 SLC8A1P32418 973 aa12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 PTH1RQ03431 593 aa12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 IFFO1Q0D2I5 559 aa12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 TRAF1Q13077 416 aa12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 TOB2Q14106 344 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 MOB2Q70IA6 237 aa12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 ELOA2Q8IYF1 753 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 KCNG4Q8TDN1 519 aa12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 CLIC6Q96NY7 704 aa12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 SH3GL2Q99962 352 aa12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 ACTR5Q9H9F9 607 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 ZNF287Q9HBT7 754 aa12.81□□□□□ -0.36
TRAPPC3-205ENST00000462715 KLC4Q9NSK0 619 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms