RNA–Protein interactions for RNA: ENST00000456369.5

CHEK2-221, Transcript of checkpoint kinase 2, human

TSL 3

Gene CHEK2, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-221	ENST00000456369	ZNF654	Q8IZM8	581 aa		11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	FBXL16	Q8N461	479 aa		11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	TCEANC2	Q96MN5	208 aa		11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	JMJD4	Q9H9V9	463 aa		11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	CWC22	Q9HCG8	908 aa	Known RBP	11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	PAK6	Q9NQU5	681 aa	Predicted RBP	11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	FBXO40	Q9UH90	709 aa		11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.57	□□□□□ -0.56
CHEK2-221	ENST00000456369	ZNF236	Q9UL36	1845 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	GRXCR2	A6NFK2	248 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	ALAS1	P13196	640 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	CCL5	P13501	91 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	RGS19	P49795	217 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	FOSB	P53539	338 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	SOX10	P56693	466 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	UBXN2A	P68543	259 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	CLEC4D	Q8WXI8	215 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	MAML3	Q96JK9	1138 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	FGD4	Q96M96	766 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	JAKMIP1	Q96N16	626 aa	Known RBP	11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	TRERF1	Q96PN7	1200 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	MYL10	Q9BUA6	226 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	AGXT2	Q9BYV1	514 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	UNC93B1	Q9H1C4	597 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	RIOX1	Q9H6W3	641 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	ACAD9	Q9H845	621 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	A1CF	Q9NQ94	594 aa	Known RBP	11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	HOMER2	Q9NSB8	354 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	RNF146	Q9NTX7	359 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	BIN2	Q9UBW5	565 aa	Predicted RBP	11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	PNMA2	Q9UL42	364 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	BRPF3	Q9ULD4	1205 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	CCPG1	Q9ULG6	757 aa		11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	DIS3	Q9Y2L1	958 aa	Known RBP	11.56	□□□□□ -0.56
CHEK2-221	ENST00000456369	PPP1R11	O60927	126 aa	Predicted RBP	11.55	□□□□□ -0.56
CHEK2-221	ENST00000456369	MYC	P01106	439 aa	Predicted RBP	11.55	□□□□□ -0.56
CHEK2-221	ENST00000456369	GJB1	P08034	283 aa		11.55	□□□□□ -0.56
CHEK2-221	ENST00000456369	RPS6KB1	P23443	525 aa		11.55	□□□□□ -0.56
CHEK2-221	ENST00000456369	CYP2C19	P33261	490 aa		11.55	□□□□□ -0.56
CHEK2-221	ENST00000456369	CACNB2	Q08289	660 aa	Predicted RBP	11.55	□□□□□ -0.56
CHEK2-221	ENST00000456369	CDC37	Q16543	378 aa	Predicted RBP	11.55	□□□□□ -0.56
CHEK2-221	ENST00000456369	QRICH1	Q2TAL8	776 aa		11.55	□□□□□ -0.56
CHEK2-221	ENST00000456369	APOA5	Q6Q788	366 aa		11.55	□□□□□ -0.56
CHEK2-221	ENST00000456369	FAM133A	Q8N9E0	248 aa		11.55	□□□□□ -0.56
CHEK2-221	ENST00000456369	TM6SF1	Q9BZW5	370 aa		11.55	□□□□□ -0.56
CHEK2-221	ENST00000456369	SLC5A4	Q9NY91	659 aa		11.55	□□□□□ -0.56
CHEK2-221	ENST00000456369	CYP39A1	Q9NYL5	469 aa		11.55	□□□□□ -0.56
CHEK2-221	ENST00000456369	SLC12A7	Q9Y666	1083 aa		11.55	□□□□□ -0.56
CHEK2-221	ENST00000456369	ASTN1	O14525	1302 aa		11.55	□□□□□ -0.56
CHEK2-221	ENST00000456369	COL11A1	P12107	1806 aa	Predicted RBP	11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	DOCK3	Q8IZD9	2030 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	CCDC69	A6NI79	296 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	NFIB	O00712	420 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	CALM1	P0DP23	149 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	CALM2	P0DP24	149 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	CALM3	P0DP25	149 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	RXRA	P19793	462 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	CAST	P20810	708 aa	Known RBP	11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	PSMA5	P28066	241 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	SMARCA1	P28370	1054 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	GJA8	P48165	433 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	BLOC1S2	Q6QNY1	142 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	MAMDC4	Q6UXC1	1216 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	NFXL1	Q6ZNB6	911 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	ANKRD35	Q8N283	1001 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	FANCB	Q8NB91	859 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	TRPV1	Q8NER1	839 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	NUP133	Q8WUM0	1156 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	SHISA4	Q96DD7	197 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	DDX11	Q96FC9	970 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	SPZ1	Q9BXG8	430 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	RNF208	Q9H0X6	261 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	VAT1L	Q9HCJ6	419 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	CHMP5	Q9NZZ3	219 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	RPTOR	Q8N122	1335 aa		11.54	□□□□□ -0.56
CHEK2-221	ENST00000456369	SOWAHB	A6NEL2	793 aa		11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	OPLAH	O14841	1288 aa		11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	ZBTB5	O15062	677 aa		11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	PLEKHA8P1	O95397	391 aa		11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	CYBA	P13498	195 aa		11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	EN2	P19622	333 aa	Predicted RBP	11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	CCND3	P30281	292 aa	Predicted RBP	11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	KIF5B	P33176	963 aa		11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	RCAN1	P53805	252 aa		11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	EVC	P57679	992 aa		11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	CNTN2	Q02246	1040 aa		11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	MFSD14C	Q5VZR4	134 aa		11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	RUFY3	Q7L099	469 aa		11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	ZNF687	Q8N1G0	1237 aa		11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	SRBD1	Q8N5C6	995 aa	Known RBP	11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	MSL3	Q8N5Y2	521 aa	Known RBP	11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	RGS22	Q8NE09	1264 aa		11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	CTCFL	Q8NI51	663 aa	Predicted RBP	11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	TINF2	Q9BSI4	451 aa		11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	HMX1	Q9NP08	348 aa	Predicted RBP	11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	PCDHGA10	Q9Y5H3	936 aa		11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	PFAS	O15067	1338 aa		11.53	□□□□□ -0.56
CHEK2-221	ENST00000456369	SGPL1	O95470	568 aa		11.52	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms