RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 PABPN1LA6NDY0 278 aaKnown RBP5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 CCP110O43303 1012 aa5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 HTATSF1O43719 755 aaKnown RBP5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 NUAK1O60285 661 aa5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 VAMP4O75379 141 aa5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 LDHCP07864 332 aa5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 FAM163BP0C2L3 166 aa5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 USP17L7P0C7H9 530 aa5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 CCDC159P0C7I6 412 aa5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 NAT2P11245 290 aa5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 CAPN2P17655 700 aa5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 RPL17P18621 184 aaKnown RBP5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 SOGA3Q5TF21 947 aa5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 TTBK2Q6IQ55 1244 aa5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 CC2D1AQ6P1N0 951 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 MRPL41Q8IXM3 137 aaKnown RBP5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 DNAJB8Q8NHS0 232 aa5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 SMCR8Q8TEV9 937 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 TTC14Q96N46 770 aa5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 DPH2Q9BQC3 489 aaPredicted RBP5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 MCOLN1Q9GZU1 580 aa5.6□□□□□ -1.51
HMGB3P9-201ENST00000441799 WIZO95785 1651 aa5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 EEA1Q15075 1411 aa5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 MYOCOSA0A1B0GUC4 107 aa5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 TRIM64CA6NLI5 447 aa5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 GOLGA6L6A8MZA4 724 aa5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 GOLGA6L22H0YM25 854 aa5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 PRC1O43663 620 aa5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 VIL1P09327 827 aaKnown RBP5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 CCDC175P0C221 793 aa5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 TPP2P29144 1249 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 WASHC5Q12768 1159 aa5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 TRDNQ13061 729 aa5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 E2F5Q15329 346 aa5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 TIGD5Q53EQ6 642 aa5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 MFSD4BQ5TF39 518 aa5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 LRCH2Q5VUJ6 765 aa5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 ALG1LQ6GMV1 187 aa5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 NLGN1Q8N2Q7 840 aa5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 SMARCC1Q92922 1105 aaPredicted RBP5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 FAM8A1Q9UBU6 413 aa5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 DIS3Q9Y2L1 958 aaKnown RBP5.59□□□□□ -1.51
HMGB3P9-201ENST00000441799 TOPBP1Q92547 1522 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 SYNJ2O15056 1496 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 CCDC196A0A1B0GTZ2 297 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 ZGLP1P0C6A0 271 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 U2AF1L5P0DN76 240 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 U2AF1Q01081 240 aaKnown RBP eCLIP5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 TMED1Q13445 227 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 UBE4AQ14139 1066 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 SEPT6Q14141 434 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 ALDH1L2Q3SY69 923 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 ZNF394Q53GI3 561 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 LCA5Q86VQ0 697 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 TTC30AQ86WT1 665 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 PPP1R13LQ8WUF5 828 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 GIMAP1Q8WWP7 306 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 TMEM87BQ96K49 555 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 ALDH8A1Q9H2A2 487 aaPredicted RBP5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 ZHX3Q9H4I2 956 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 PARD6AQ9NPB6 346 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 EBF1Q9UH73 591 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 TCEAL9Q9UHQ7 104 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 CEP131Q9UPN4 1083 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 ZNF652Q9Y2D9 606 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 TACC3Q9Y6A5 838 aa5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 DDX49Q9Y6V7 483 aaKnown RBP5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 TOP2AP11388 1531 aaKnown RBP5.58□□□□□ -1.52
HMGB3P9-201ENST00000441799 PPFIA2O75334 1257 aa5.57□□□□□ -1.52
HMGB3P9-201ENST00000441799 DLG4P78352 724 aa5.57□□□□□ -1.52
HMGB3P9-201ENST00000441799 SLC6A19Q695T7 634 aa5.57□□□□□ -1.52
HMGB3P9-201ENST00000441799 NDUFAF2Q8N183 169 aa5.57□□□□□ -1.52
HMGB3P9-201ENST00000441799 MYO1HQ8N1T3 1032 aa5.57□□□□□ -1.52
HMGB3P9-201ENST00000441799 NGDNQ8NEJ9 315 aaKnown RBP5.57□□□□□ -1.52
HMGB3P9-201ENST00000441799 PDZD8Q8NEN9 1154 aa5.57□□□□□ -1.52
HMGB3P9-201ENST00000441799 BAHD1Q8TBE0 780 aaPredicted RBP5.57□□□□□ -1.52
HMGB3P9-201ENST00000441799 TEKT1Q969V4 418 aa5.57□□□□□ -1.52
HMGB3P9-201ENST00000441799 MMTAG2Q9BU76 263 aaKnown RBP5.57□□□□□ -1.52
HMGB3P9-201ENST00000441799 BCL2L13Q9BXK5 485 aa5.57□□□□□ -1.52
HMGB3P9-201ENST00000441799 GCM1Q9NP62 436 aa5.57□□□□□ -1.52
HMGB3P9-201ENST00000441799 HOXC10Q9NYD6 342 aa5.57□□□□□ -1.52
HMGB3P9-201ENST00000441799 G3BP2Q9UN86 482 aaKnown RBP5.57□□□□□ -1.52
HMGB3P9-201ENST00000441799 SPG7Q9UQ90 795 aa5.57□□□□□ -1.52
HMGB3P9-201ENST00000441799 LZTS1Q9Y250 596 aa5.57□□□□□ -1.52
HMGB3P9-201ENST00000441799 COL4A3BPQ9Y5P4 624 aa5.57□□□□□ -1.52
HMGB3P9-201ENST00000441799 TDRD9Q8NDG6 1382 aaKnown RBP5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 DISP3Q9P2K9 1392 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 SYNJ1O43426 1573 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 ERICH4A6NGS2 130 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 CHL1O00533 1208 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 PGRP06401 933 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 RPS26P62854 115 aaKnown RBP5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 SARNPP82979 210 aaKnown RBP5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 EGR3Q06889 387 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 TCEAL1Q15170 157 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 CCDC144BQ3MJ40 725 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 FILIP1LQ4L180 1135 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 ARHGEF25Q86VW2 580 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 IRF2BP1Q8IU81 584 aa5.56□□□□□ -1.52
HMGB3P9-201ENST00000441799 FMNL3Q8IVF7 1028 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms