RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 RPGRIP1Q96KN7 1286 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 NCAPGQ9BPX3 1015 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 TUT1Q9H6E5 874 aaKnown RBP9.04□□□□□ -0.96
VTI1A-202ENST00000432306 ABCB6Q9NP58 842 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 VPS18Q9P253 973 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 CEP126Q9P2H0 1117 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 KLF15Q9UIH9 416 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 KCNH3Q9ULD8 1083 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 AKAP2Q9Y2D5 859 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 JRKLQ9Y4A0 524 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 NFE2L3Q9Y4A8 694 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 TIAM2Q8IVF5 1701 aa9.04□□□□□ -0.96
VTI1A-202ENST00000432306 CNTNAP4Q9C0A0 1308 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 DICER1Q9UPY3 1922 aaKnown RBP9.03□□□□□ -0.96
VTI1A-202ENST00000432306 A0A087WUV0 522 aaPredicted RBP9.03□□□□□ -0.96
VTI1A-202ENST00000432306 TARSL2A2RTX5 802 aaKnown RBP9.03□□□□□ -0.96
VTI1A-202ENST00000432306 LRRC10BA6NIK2 292 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 CHGBP05060 677 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 CDC27P30260 824 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 ZNF76P36508 570 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 PBX2P40425 430 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 IL15P40933 162 aaPredicted RBP9.03□□□□□ -0.96
VTI1A-202ENST00000432306 MMP14P50281 582 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 KCTD2Q14681 263 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 IMMTQ16891 758 aaKnown RBP9.03□□□□□ -0.96
VTI1A-202ENST00000432306 TTC31Q49AM3 519 aaPredicted RBP9.03□□□□□ -0.96
VTI1A-202ENST00000432306 C1orf141Q5JVX7 400 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 RPAINQ86UA6 219 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 CNGA4Q8IV77 575 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 PAF1Q8N7H5 531 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 CNNM3Q8NE01 707 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 RUBCNQ92622 972 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 TRERF1Q96PN7 1200 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 MED15Q96RN5 788 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 CTAGE1Q96RT6 745 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 MAN1B1Q9UKM7 699 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 VPS9D1Q9Y2B5 631 aa9.03□□□□□ -0.96
VTI1A-202ENST00000432306 KLF18A0A0U1RQI7 1052 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 CTAGE15A4D2H0 777 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 CTAGE9A4FU28 777 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 GLTPD2A6NH11 291 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 FAM196BA6NMK8 535 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 GOLGA8BA8MQT2 603 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 MFAP3LO75121 409 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 RPS6KA4O75676 772 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 CTAGE8P0CG41 777 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 PLCD1P51178 756 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 EIF5P55010 431 aaKnown RBP9.02□□□□□ -0.96
VTI1A-202ENST00000432306 RAPGEF1Q13905 1077 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 POSTNQ15063 836 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 NTRK3Q16288 839 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 HSP90B2PQ58FF3 399 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 CDKAL1Q5VV42 579 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 KRT40Q6A162 431 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 OTUD7BQ6GQQ9 843 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 ZNF790Q6PG37 636 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 RAD9BQ6WBX8 426 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 ANKRD13DQ6ZTN6 518 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 CTAGE6Q86UF2 777 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 SGMS1Q86VZ5 419 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 TMTC1Q8IUR5 882 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 CTAGE4Q8IX94 777 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 IFT122Q9HBG6 1241 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 ADD3Q9UEY8 706 aaKnown RBP9.02□□□□□ -0.96
VTI1A-202ENST00000432306 SH3BP1Q9Y3L3 701 aa9.02□□□□□ -0.96
VTI1A-202ENST00000432306 DLEC1Q9Y238 1755 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 PRAMEF22A3QJZ6 481 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 MOXD2PA6NHM9 499 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 A6NNZ2 444 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 H7C1W4 665 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 SH2B2O14492 632 aaPredicted RBP9.02□□□□□ -0.97
VTI1A-202ENST00000432306 CPLX1O14810 134 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 SPTLC1O15269 473 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 ICMTO60725 284 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 LDHCP07864 332 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 SLC10A3P09131 477 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 NOS2P35228 1153 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 GTF2A1P52655 376 aaPredicted RBP9.02□□□□□ -0.97
VTI1A-202ENST00000432306 GSCP56915 257 aaPredicted RBP9.02□□□□□ -0.97
VTI1A-202ENST00000432306 VSNL1P62760 191 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 FMR1Q06787 632 aaKnown RBP eCLIP9.02□□□□□ -0.97
VTI1A-202ENST00000432306 TUBB8Q3ZCM7 444 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 LCE2DQ5TA82 110 aaPredicted RBP9.02□□□□□ -0.97
VTI1A-202ENST00000432306 GLYCTKQ8IVS8 523 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 RDH13Q8NBN7 331 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 OSBP2Q969R2 916 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 NEUROD6Q96NK8 337 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 NAPGQ99747 312 aaPredicted RBP9.02□□□□□ -0.97
VTI1A-202ENST00000432306 TEX13AQ9BXU3 409 aaPredicted RBP9.02□□□□□ -0.97
VTI1A-202ENST00000432306 INPP5FQ9Y2H2 1132 aa9.02□□□□□ -0.97
VTI1A-202ENST00000432306 AFDNP55196 1824 aaKnown RBP9.01□□□□□ -0.97
VTI1A-202ENST00000432306 PCNTO95613 3336 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 M0R2C6 588 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 SYF2O95926 243 aaKnown RBP9.01□□□□□ -0.97
VTI1A-202ENST00000432306 FAM163BP0C2L3 166 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 PHKG2P15735 406 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 LMNB1P20700 586 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 MARCKSP29966 332 aaPredicted RBP9.01□□□□□ -0.97
VTI1A-202ENST00000432306 RCAN1P53805 252 aa9.01□□□□□ -0.97
VTI1A-202ENST00000432306 ADKP55263 362 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms