RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 IGSF22Q8N9C0 903 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 ZNF280CQ8ND82 737 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 DHX58Q96C10 678 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 C12orf42Q96LP6 360 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 MBOAT7Q96N66 472 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 P2RX7Q99572 595 aaKnown RBP17.21■□□□□ 0.35
ACTB-204ENST00000425660 BPIFA3Q9BQP9 254 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 NAT10Q9H0A0 1025 aaKnown RBP17.21■□□□□ 0.35
ACTB-204ENST00000425660 PCDHA5Q9Y5H7 936 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 FOXN1O15353 648 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 GRIN3BO60391 1043 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 SPP2Q13103 211 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 ZRSR1Q15695 479 aaKnown RBP17.21■□□□□ 0.35
ACTB-204ENST00000425660 CALCRLQ16602 461 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 USP50Q70EL3 339 aaPredicted RBP17.21■□□□□ 0.35
ACTB-204ENST00000425660 ZC3H15Q8WU90 426 aaKnown RBP17.21■□□□□ 0.35
ACTB-204ENST00000425660 DCPSQ96C86 337 aaKnown RBP17.21■□□□□ 0.35
ACTB-204ENST00000425660 SLF1Q9BQI6 1058 aa17.21■□□□□ 0.35
ACTB-204ENST00000425660 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.2■□□□□ 0.34
ACTB-204ENST00000425660 ICAM1P05362 532 aa17.2■□□□□ 0.34
ACTB-204ENST00000425660 SREBF1P36956 1147 aa17.2■□□□□ 0.34
ACTB-204ENST00000425660 FXR2P51116 673 aaKnown RBP eCLIP17.2■□□□□ 0.342e-53■■□□□ 12.2
ACTB-204ENST00000425660 PDXDC2PQ6P474 469 aa17.2■□□□□ 0.34
ACTB-204ENST00000425660 SULF1Q8IWU6 871 aa17.2■□□□□ 0.34
ACTB-204ENST00000425660 DISC1Q9NRI5 854 aa17.2■□□□□ 0.34
ACTB-204ENST00000425660 ZNF536O15090 1300 aa17.2■□□□□ 0.34
ACTB-204ENST00000425660 ABCB11O95342 1321 aa17.2■□□□□ 0.34
ACTB-204ENST00000425660 A0A087WWV3 80 aa17.19■□□□□ 0.34
ACTB-204ENST00000425660 USP2O75604 605 aaPredicted RBP17.19■□□□□ 0.34
ACTB-204ENST00000425660 TRIML1Q8N9V2 468 aa17.19■□□□□ 0.34
ACTB-204ENST00000425660 PAGE5Q96GU1 130 aa17.19■□□□□ 0.34
ACTB-204ENST00000425660 DDX25Q9UHL0 483 aaKnown RBP17.19■□□□□ 0.34
ACTB-204ENST00000425660 FZD1Q9UP38 647 aa17.19■□□□□ 0.34
ACTB-204ENST00000425660 MRPL11Q9Y3B7 192 aaKnown RBP17.19■□□□□ 0.34
ACTB-204ENST00000425660 GLTPD2A6NH11 291 aa17.19■□□□□ 0.34
ACTB-204ENST00000425660 SPDYE3A6NKU9 549 aa17.19■□□□□ 0.34
ACTB-204ENST00000425660 C19orf81C9J6K1 198 aa17.19■□□□□ 0.34
ACTB-204ENST00000425660 CDC25AP30304 524 aa17.19■□□□□ 0.34
ACTB-204ENST00000425660 UBA7P41226 1012 aa17.19■□□□□ 0.34
ACTB-204ENST00000425660 ARHGAP4P98171 946 aa17.19■□□□□ 0.34
ACTB-204ENST00000425660 PDIA5Q14554 519 aa17.19■□□□□ 0.34
ACTB-204ENST00000425660 CCDC174Q6PII3 467 aa17.19■□□□□ 0.34
ACTB-204ENST00000425660 LDHDQ86WU2 507 aa17.19■□□□□ 0.34
ACTB-204ENST00000425660 SLC38A10Q9HBR0 1119 aa17.19■□□□□ 0.34
ACTB-204ENST00000425660 PPP1R9AQ9ULJ8 1098 aa17.19■□□□□ 0.34
ACTB-204ENST00000425660 ZHX2Q9Y6X8 837 aa17.19■□□□□ 0.34
ACTB-204ENST00000425660 PP2D1A8MPX8 630 aa17.18■□□□□ 0.34
ACTB-204ENST00000425660 BIN1O00499 593 aa17.18■□□□□ 0.34
ACTB-204ENST00000425660 PRR29P0C7W0 189 aa17.18■□□□□ 0.34
ACTB-204ENST00000425660 FDX1P10109 184 aa17.18■□□□□ 0.34
ACTB-204ENST00000425660 TAL1P17542 331 aaPredicted RBP17.18■□□□□ 0.34
ACTB-204ENST00000425660 GHRHRQ02643 423 aa17.18■□□□□ 0.34
ACTB-204ENST00000425660 DGKZQ13574 1117 aa17.18■□□□□ 0.34
ACTB-204ENST00000425660 NAALADL2Q58DX5 795 aa17.18■□□□□ 0.34
ACTB-204ENST00000425660 DHX40Q8IX18 779 aaKnown RBP17.18■□□□□ 0.34
ACTB-204ENST00000425660 HAS1Q92839 578 aa17.18■□□□□ 0.34
ACTB-204ENST00000425660 MYH7BA7E2Y1 1941 aa17.18■□□□□ 0.34
ACTB-204ENST00000425660 PHIPQ8WWQ0 1821 aa17.18■□□□□ 0.34
ACTB-204ENST00000425660 PAPPA2Q9BXP8 1791 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 CYP3A4P08684 503 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 CIITAP33076 1130 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 TECP42680 631 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 DPYDQ12882 1025 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 KARSQ15046 597 aaKnown RBP17.17■□□□□ 0.34
ACTB-204ENST00000425660 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.17■□□□□ 0.34
ACTB-204ENST00000425660 GRAMD1CQ8IYS0 662 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 SMARCE1Q969G3 411 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 RPAP3Q9H6T3 665 aaPredicted RBP17.17■□□□□ 0.34
ACTB-204ENST00000425660 KCNMB3Q9NPA1 279 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 PNMA2Q9UL42 364 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 AFG3L2Q9Y4W6 797 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 ADM5C9JUS6 153 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 GCOM1H8Y6P7 765 aaPredicted RBP17.17■□□□□ 0.34
ACTB-204ENST00000425660 POLR2MP0CAP2 368 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 BMP6P22004 513 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 EPHX2P34913 555 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 TXKP42681 527 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 KRT26Q7Z3Y9 468 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 GSDMAQ96QA5 445 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 MTRQ99707 1265 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 MMTAG2Q9BU76 263 aaKnown RBP17.17■□□□□ 0.34
ACTB-204ENST00000425660 RAB34Q9BZG1 259 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 TANGO6Q9C0B7 1094 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 CUEDC2Q9H467 287 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 CCDC39Q9UFE4 941 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 MAN1B1Q9UKM7 699 aa17.17■□□□□ 0.34
ACTB-204ENST00000425660 POLR2AP24928 1970 aaKnown RBP17.16■□□□□ 0.34
ACTB-204ENST00000425660 AP5Z1O43299 807 aa17.16■□□□□ 0.34
ACTB-204ENST00000425660 PPP1R12BO60237 982 aaPredicted RBP17.16■□□□□ 0.34
ACTB-204ENST00000425660 FLOT1O75955 427 aa17.16■□□□□ 0.34
ACTB-204ENST00000425660 SMC2O95347 1197 aa17.16■□□□□ 0.34
ACTB-204ENST00000425660 HOXA13P31271 388 aaPredicted RBP17.16■□□□□ 0.34
ACTB-204ENST00000425660 STAT6P42226 847 aa17.16■□□□□ 0.34
ACTB-204ENST00000425660 MORC3Q14149 939 aa17.16■□□□□ 0.34
ACTB-204ENST00000425660 TMEM266Q2M3C6 531 aa17.16■□□□□ 0.34
ACTB-204ENST00000425660 Q4G0T1 1027 aa17.16■□□□□ 0.34
ACTB-204ENST00000425660 CABP7Q86V35 215 aa17.16■□□□□ 0.34
ACTB-204ENST00000425660 MAGEF1Q9HAY2 307 aa17.16■□□□□ 0.34
ACTB-204ENST00000425660 SNCAIPQ9Y6H5 919 aa17.16■□□□□ 0.34
ACTB-204ENST00000425660 TBX3O15119 743 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms