RNA–Protein interactions for RNA: ENST00000415891.5

CLIP4-205, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-205ENST00000415891 CAPN3P20807 821 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 CES1P23141 567 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 ANXA13P27216 316 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 PMS2P54278 862 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 DSTNP60981 165 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 SMAD4Q13485 552 aaKnown RBP7.43□□□□□ -1.22
CLIP4-205ENST00000415891 NBPF14Q5TI25 921 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 TATDN1Q6P1N9 297 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 GOT1L1Q8NHS2 421 aaPredicted RBP7.43□□□□□ -1.22
CLIP4-205ENST00000415891 ARL8AQ96BM9 186 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 HPS4Q9NQG7 708 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 ANKEF1Q9NU02 776 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 TBC1D22BQ9NU19 505 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 PPP1R14DQ9NXH3 145 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 AATFQ9NY61 560 aaKnown RBP eCLIP7.43□□□□□ -1.22
CLIP4-205ENST00000415891 HESX1Q9UBX0 185 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 ZMIZ1Q9ULJ6 1067 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 DUSP12Q9UNI6 340 aa7.43□□□□□ -1.22
CLIP4-205ENST00000415891 RASSF10A6NK89 507 aa7.42□□□□□ -1.22
CLIP4-205ENST00000415891 HOXC11O43248 304 aaPredicted RBP7.42□□□□□ -1.22
CLIP4-205ENST00000415891 PRPF3O43395 683 aaKnown RBP7.42□□□□□ -1.22
CLIP4-205ENST00000415891 POTEIP0CG38 1075 aa7.42□□□□□ -1.22
CLIP4-205ENST00000415891 HOXC12P31275 282 aa7.42□□□□□ -1.22
CLIP4-205ENST00000415891 ROR2Q01974 943 aaKnown RBP7.42□□□□□ -1.22
CLIP4-205ENST00000415891 TKFCQ3LXA3 575 aa7.42□□□□□ -1.22
CLIP4-205ENST00000415891 ANKDD1AQ495B1 522 aa7.42□□□□□ -1.22
CLIP4-205ENST00000415891 ANGPTL8Q6UXH0 198 aa7.42□□□□□ -1.22
CLIP4-205ENST00000415891 BICDL1Q6ZP65 573 aa7.42□□□□□ -1.22
CLIP4-205ENST00000415891 BBOF1Q8ND07 529 aa7.42□□□□□ -1.22
CLIP4-205ENST00000415891 OR52K2Q8NGK3 314 aa7.42□□□□□ -1.22
CLIP4-205ENST00000415891 RNF34Q969K3 372 aa7.42□□□□□ -1.22
CLIP4-205ENST00000415891 VPS50Q96JG6 964 aa7.42□□□□□ -1.22
CLIP4-205ENST00000415891 MAELQ96JY0 434 aaKnown RBP7.42□□□□□ -1.22
CLIP4-205ENST00000415891 CNDP2Q96KP4 475 aaKnown RBP7.42□□□□□ -1.22
CLIP4-205ENST00000415891 SNX27Q96L92 541 aa7.42□□□□□ -1.22
CLIP4-205ENST00000415891 ALS2CR12Q96Q35 445 aa7.42□□□□□ -1.22
CLIP4-205ENST00000415891 VPS37BQ9H9H4 285 aa7.42□□□□□ -1.22
CLIP4-205ENST00000415891 ARGLU1Q9NWB6 273 aaPredicted RBP7.42□□□□□ -1.22
CLIP4-205ENST00000415891 MOCS1Q9NZB8 636 aa7.42□□□□□ -1.22
CLIP4-205ENST00000415891 ROCK2O75116 1388 aaKnown RBP7.42□□□□□ -1.22
CLIP4-205ENST00000415891 TRAV6A0A075B6T7 132 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 EIF3CLB5ME19 914 aaKnown RBP7.41□□□□□ -1.22
CLIP4-205ENST00000415891 TGDSO95455 350 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 IVLP07476 585 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 TROVE2P10155 538 aaKnown RBP eCLIP7.41□□□□□ -1.22
CLIP4-205ENST00000415891 ALAS1P13196 640 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 GPTP24298 496 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 PRKAR1BP31321 381 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 BLVRAP53004 296 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 NUBP1P53384 320 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 CCNG2Q16589 344 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 MTERF2Q49AM1 385 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 TMEM53Q6P2H8 277 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 B4GALNT4Q76KP1 1039 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 TRIM22Q8IYM9 498 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 ZBTB8BQ8NAP8 495 aaPredicted RBP7.41□□□□□ -1.22
CLIP4-205ENST00000415891 PPP1R14CQ8TAE6 165 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 SMARCC2Q8TAQ2 1214 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 GDAP1Q8TB36 358 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 LPIN2Q92539 896 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 EIF3CQ99613 913 aaKnown RBP7.41□□□□□ -1.22
CLIP4-205ENST00000415891 CCT7Q99832 543 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 BRD9Q9H8M2 597 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 NUDCQ9Y266 331 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 GMEB1Q9Y692 573 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 SMG6Q86US8 1419 aaKnown RBP7.41□□□□□ -1.22
CLIP4-205ENST00000415891 NPC1L1Q9UHC9 1359 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.41□□□□□ -1.22
CLIP4-205ENST00000415891 CCDC169A6NNP5 214 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 UBAP1LF5GYI3 381 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 ASAP2O43150 1006 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 CYTH3O43739 400 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 FGRP09769 529 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 HOXD12P35452 270 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 HTR3AP46098 478 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 SLC8A3P57103 927 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 NCBP1Q09161 790 aaKnown RBP7.41□□□□□ -1.22
CLIP4-205ENST00000415891 KIF5AQ12840 1032 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 MTX1Q13505 466 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 BEND6Q5SZJ8 279 aaPredicted RBP7.41□□□□□ -1.22
CLIP4-205ENST00000415891 CABP7Q86V35 215 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 IFNL1Q8IU54 200 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 CCDC13Q8IYE1 715 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 COLGALT2Q8IYK4 626 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 PDCD7Q8N8D1 485 aaKnown RBP7.41□□□□□ -1.22
CLIP4-205ENST00000415891 SYT2Q8N9I0 419 aaPredicted RBP7.41□□□□□ -1.22
CLIP4-205ENST00000415891 NUP133Q8WUM0 1156 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 PPP2R3CQ969Q6 453 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 UCN2Q96RP3 112 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 OSBPL9Q96SU4 736 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 ZFYVE28Q9HCC9 887 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 ZNF624Q9P2J8 865 aaPredicted RBP7.41□□□□□ -1.22
CLIP4-205ENST00000415891 AGTPBP1Q9UPW5 1226 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 PTPRGP23470 1445 aa7.41□□□□□ -1.22
CLIP4-205ENST00000415891 J3KRW8 73 aa7.4□□□□□ -1.22
CLIP4-205ENST00000415891 MAP3K7O43318 606 aa7.4□□□□□ -1.22
CLIP4-205ENST00000415891 STX6O43752 255 aa7.4□□□□□ -1.22
CLIP4-205ENST00000415891 RNF8O76064 485 aa7.4□□□□□ -1.22
CLIP4-205ENST00000415891 BAG2O95816 211 aa7.4□□□□□ -1.22
CLIP4-205ENST00000415891 PNMA6AP0CW24 399 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms