RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 SPATA31A7Q8IWB4 1347 aa14.68□□□□□ -0.06
NFKB1-202ENST00000394820 EIF4E1BA6NMX2 242 aaKnown RBP14.68□□□□□ -0.06
NFKB1-202ENST00000394820 RNF225M0QZC1 329 aaPredicted RBP14.68□□□□□ -0.06
NFKB1-202ENST00000394820 TOM1O60784 492 aa14.68□□□□□ -0.06
NFKB1-202ENST00000394820 CPLX4Q7Z7G2 160 aa14.68□□□□□ -0.06
NFKB1-202ENST00000394820 PNMA1Q8ND90 353 aa14.68□□□□□ -0.06
NFKB1-202ENST00000394820 CNOT6LQ96LI5 555 aaKnown RBP14.68□□□□□ -0.06
NFKB1-202ENST00000394820 KRT12Q99456 494 aa14.68□□□□□ -0.06
NFKB1-202ENST00000394820 DPH5Q9H2P9 285 aa14.68□□□□□ -0.06
NFKB1-202ENST00000394820 NHEJ1Q9H9Q4 299 aaPredicted RBP14.68□□□□□ -0.06
NFKB1-202ENST00000394820 GPCPD1Q9NPB8 672 aa14.68□□□□□ -0.06
NFKB1-202ENST00000394820 NFU1Q9UMS0 254 aa14.68□□□□□ -0.06
NFKB1-202ENST00000394820 PARP4Q9UKK3 1724 aaKnown RBP14.67□□□□□ -0.06
NFKB1-202ENST00000394820 ADAMTS7Q9UKP4 1686 aa14.67□□□□□ -0.06
NFKB1-202ENST00000394820 OPA1O60313 960 aa14.67□□□□□ -0.06
NFKB1-202ENST00000394820 GRIK5Q16478 980 aa14.67□□□□□ -0.06
NFKB1-202ENST00000394820 ZSCAN29Q8IWY8 852 aaPredicted RBP14.67□□□□□ -0.06
NFKB1-202ENST00000394820 GSDMAQ96QA5 445 aa14.67□□□□□ -0.06
NFKB1-202ENST00000394820 PANX2Q96RD6 677 aa14.67□□□□□ -0.06
NFKB1-202ENST00000394820 NAA15Q9BXJ9 866 aaKnown RBP14.67□□□□□ -0.06
NFKB1-202ENST00000394820 RNF26Q9BY78 433 aaPredicted RBP14.67□□□□□ -0.06
NFKB1-202ENST00000394820 GOLPH3Q9H4A6 298 aa14.67□□□□□ -0.06
NFKB1-202ENST00000394820 HAUS4Q9H6D7 363 aa14.67□□□□□ -0.06
NFKB1-202ENST00000394820 ADD3Q9UEY8 706 aaKnown RBP14.67□□□□□ -0.06
NFKB1-202ENST00000394820 PKD1L3Q7Z443 1732 aa14.67□□□□□ -0.06
NFKB1-202ENST00000394820 MKRN4PQ13434 485 aaPredicted RBP14.67□□□□□ -0.06
NFKB1-202ENST00000394820 ZNF384Q8TF68 577 aa14.67□□□□□ -0.06
NFKB1-202ENST00000394820 KRT14P02533 472 aa14.67□□□□□ -0.06
NFKB1-202ENST00000394820 LRRC1Q9BTT6 524 aa14.67□□□□□ -0.06
NFKB1-202ENST00000394820 LACRTQ9GZZ8 138 aa14.67□□□□□ -0.06
NFKB1-202ENST00000394820 RPSAP08865 295 aaKnown RBP14.66□□□□□ -0.06
NFKB1-202ENST00000394820 CABP7Q86V35 215 aa14.66□□□□□ -0.06
NFKB1-202ENST00000394820 RRP36Q96EU6 259 aaKnown RBP14.66□□□□□ -0.06
NFKB1-202ENST00000394820 ANKRD2Q9GZV1 360 aa14.66□□□□□ -0.06
NFKB1-202ENST00000394820 HPSEQ9Y251 543 aa14.66□□□□□ -0.06
NFKB1-202ENST00000394820 ADAMTS3O15072 1205 aa14.66□□□□□ -0.06
NFKB1-202ENST00000394820 FCER1AP12319 257 aa14.66□□□□□ -0.06
NFKB1-202ENST00000394820 SCG2P13521 617 aa14.66□□□□□ -0.06
NFKB1-202ENST00000394820 EIF4A3P38919 411 aaKnown RBP14.66□□□□□ -0.06
NFKB1-202ENST00000394820 ADCY1Q08828 1119 aa14.66□□□□□ -0.06
NFKB1-202ENST00000394820 CLEC4GQ6UXB4 293 aa14.66□□□□□ -0.06
NFKB1-202ENST00000394820 PNMA8AQ86V59 439 aaPredicted RBP14.66□□□□□ -0.06
NFKB1-202ENST00000394820 FERMT2Q96AC1 680 aa14.66□□□□□ -0.06
NFKB1-202ENST00000394820 LUC7LQ9NQ29 371 aaKnown RBP14.66□□□□□ -0.06
NFKB1-202ENST00000394820 ACTN3Q08043 901 aaPredicted RBP14.65□□□□□ -0.06
NFKB1-202ENST00000394820 SEC23AQ15436 765 aa14.65□□□□□ -0.06
NFKB1-202ENST00000394820 TSG101Q99816 390 aa14.65□□□□□ -0.06
NFKB1-202ENST00000394820 FAM169AQ9Y6X4 670 aa14.65□□□□□ -0.06
NFKB1-202ENST00000394820 SSR1P43307 286 aaKnown RBP14.65□□□□□ -0.06
NFKB1-202ENST00000394820 PKN1Q16512 942 aa14.65□□□□□ -0.06
NFKB1-202ENST00000394820 GBP6Q6ZN66 633 aa14.65□□□□□ -0.06
NFKB1-202ENST00000394820 TEX11Q8IYF3 940 aa14.65□□□□□ -0.06
NFKB1-202ENST00000394820 CCDC155Q8N6L0 562 aa14.65□□□□□ -0.06
NFKB1-202ENST00000394820 TRIML1Q8N9V2 468 aa14.65□□□□□ -0.06
NFKB1-202ENST00000394820 HDAC7Q8WUI4 952 aa14.65□□□□□ -0.06
NFKB1-202ENST00000394820 GJA10Q969M2 543 aa14.65□□□□□ -0.06
NFKB1-202ENST00000394820 MKRN1Q9UHC7 482 aaKnown RBP14.65□□□□□ -0.06
NFKB1-202ENST00000394820 A0A1B0GTH6 734 aa14.65□□□□□ -0.06
NFKB1-202ENST00000394820 KCNK3O14649 394 aa14.65□□□□□ -0.06
NFKB1-202ENST00000394820 ATP8B1O43520 1251 aa14.65□□□□□ -0.06
NFKB1-202ENST00000394820 BAG3O95817 575 aa14.65□□□□□ -0.06
NFKB1-202ENST00000394820 KRT13P13646 458 aa14.65□□□□□ -0.06
NFKB1-202ENST00000394820 SF3B3Q15393 1217 aaKnown RBP14.65□□□□□ -0.06
NFKB1-202ENST00000394820 TMTC3Q6ZXV5 915 aa14.65□□□□□ -0.06
NFKB1-202ENST00000394820 NARFQ9UHQ1 456 aa14.65□□□□□ -0.06
NFKB1-202ENST00000394820 ACTN4O43707 911 aaKnown RBP14.64□□□□□ -0.07
NFKB1-202ENST00000394820 POLR2FP61218 127 aaKnown RBP14.64□□□□□ -0.07
NFKB1-202ENST00000394820 GUCY1A3Q02108 690 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 TROAPQ12815 778 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 DPYDQ12882 1025 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 CCDC121Q6ZUS5 278 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 BLIDQ8IZY5 108 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 TBC1D31Q96DN5 1066 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 MRRFQ96E11 262 aaKnown RBP14.64□□□□□ -0.07
NFKB1-202ENST00000394820 HSD3B7Q9H2F3 369 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 RBM28Q9NW13 759 aaKnown RBP14.64□□□□□ -0.07
NFKB1-202ENST00000394820 L1RE1Q9UN81 338 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 THRAP3Q9Y2W1 955 aaKnown RBP14.64□□□□□ -0.07
NFKB1-202ENST00000394820 HYOU1Q9Y4L1 999 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 GTPBP6O43824 516 aaPredicted RBP14.64□□□□□ -0.07
NFKB1-202ENST00000394820 BMP15O95972 392 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 ICE2Q659A1 982 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 CLEC10AQ8IUN9 316 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 PAIP2Q9BPZ3 127 aaKnown RBP14.64□□□□□ -0.07
NFKB1-202ENST00000394820 AP1M1Q9BXS5 423 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.64□□□□□ -0.07
NFKB1-202ENST00000394820 FRMPD2Q68DX3 1309 aaPredicted RBP14.64□□□□□ -0.07
NFKB1-202ENST00000394820 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.64□□□□□ -0.07
NFKB1-202ENST00000394820 CALM1P0DP23 149 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 CALM2P0DP24 149 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 CALM3P0DP25 149 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 ABCB4P21439 1286 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 RBM5P52756 815 aaKnown RBP eCLIP14.64□□□□□ -0.07
NFKB1-202ENST00000394820 SEC24CP53992 1094 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 USP17L2Q6R6M4 530 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 LRRC31Q6UY01 552 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 MGARPQ8TDB4 240 aa14.64□□□□□ -0.07
NFKB1-202ENST00000394820 CTNNBL1Q8WYA6 563 aaPredicted RBP14.64□□□□□ -0.07
NFKB1-202ENST00000394820 TACO1Q9BSH4 297 aaKnown RBP14.64□□□□□ -0.07
NFKB1-202ENST00000394820 STK36Q9NRP7 1315 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms