RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 PPP1R3GB7ZBB8 358 aa13.64□□□□□ -0.23
HMGCL-202ENST00000374487 VEGFBP49765 207 aa13.64□□□□□ -0.23
HMGCL-202ENST00000374487 HDLBPQ00341 1268 aaKnown RBP13.64□□□□□ -0.23
HMGCL-202ENST00000374487 NONOQ15233 471 aaKnown RBP eCLIP13.64□□□□□ -0.23
HMGCL-202ENST00000374487 LETM2Q2VYF4 491 aa13.64□□□□□ -0.23
HMGCL-202ENST00000374487 RRAGBQ5VZM2 374 aa13.64□□□□□ -0.23
HMGCL-202ENST00000374487 PIGSQ96S52 555 aa13.64□□□□□ -0.23
HMGCL-202ENST00000374487 ZIC5Q96T25 663 aa13.64□□□□□ -0.23
HMGCL-202ENST00000374487 GBA2Q9HCG7 927 aaPredicted RBP13.64□□□□□ -0.23
HMGCL-202ENST00000374487 DISC1Q9NRI5 854 aa13.64□□□□□ -0.23
HMGCL-202ENST00000374487 CCNT1O60563 726 aaKnown RBP13.63□□□□□ -0.23
HMGCL-202ENST00000374487 PDHBP11177 359 aa13.63□□□□□ -0.23
HMGCL-202ENST00000374487 APOBEC3FQ8IUX4 373 aaKnown RBP13.63□□□□□ -0.23
HMGCL-202ENST00000374487 LRRC47Q8N1G4 583 aaKnown RBP13.63□□□□□ -0.23
HMGCL-202ENST00000374487 CTAGE1Q96RT6 745 aa13.63□□□□□ -0.23
HMGCL-202ENST00000374487 TMEM60Q9H2L4 133 aa13.63□□□□□ -0.23
HMGCL-202ENST00000374487 TLL2Q9Y6L7 1015 aa13.63□□□□□ -0.23
HMGCL-202ENST00000374487 SSC5DA1L4H1 1573 aa13.63□□□□□ -0.23
HMGCL-202ENST00000374487 FRMPD2Q68DX3 1309 aaPredicted RBP13.63□□□□□ -0.23
HMGCL-202ENST00000374487 CTIFO43310 598 aaKnown RBP13.62□□□□□ -0.23
HMGCL-202ENST00000374487 RPN1P04843 607 aaKnown RBP13.62□□□□□ -0.23
HMGCL-202ENST00000374487 HLA-DOAP06340 250 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 AKR1B1P15121 316 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 PRPHP41219 470 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 NOVP48745 357 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 HUNKP57058 714 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 GABPAQ06546 454 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 GOLGA8FQ08AF8 430 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 GOLGA8DPQ0D2H9 430 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 NR1I3Q14994 352 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 FILIP1LQ4L180 1135 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 KLRG1Q96E93 195 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 TEPSINQ96N21 525 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 MTRQ99707 1265 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 MRIQ9BWK5 157 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 TMX1Q9H3N1 280 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 DDX4Q9NQI0 724 aaKnown RBP13.62□□□□□ -0.23
HMGCL-202ENST00000374487 SWAP70Q9UH65 585 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 CTNND2Q9UQB3 1225 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 DDX60LQ5H9U9 1706 aaKnown RBP13.62□□□□□ -0.23
HMGCL-202ENST00000374487 PP2D1A8MPX8 630 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 AOC2O75106 756 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 TTLL1O95922 423 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 DEFB115Q30KQ5 88 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 ASPRV1Q53RT3 343 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 NEK8Q86SG6 692 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 REXO1Q8N1G1 1221 aaKnown RBP13.62□□□□□ -0.23
HMGCL-202ENST00000374487 BAG1Q99933 345 aaPredicted RBP13.62□□□□□ -0.23
HMGCL-202ENST00000374487 FAM198AQ9UFP1 575 aa13.62□□□□□ -0.23
HMGCL-202ENST00000374487 A0A1B0GTH6 734 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 MPHOSPH10O00566 681 aaKnown RBP13.61□□□□□ -0.23
HMGCL-202ENST00000374487 MMP14P50281 582 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 TBX2Q13207 712 aaPredicted RBP13.61□□□□□ -0.23
HMGCL-202ENST00000374487 TTLL12Q14166 644 aaPredicted RBP13.61□□□□□ -0.23
HMGCL-202ENST00000374487 ZNF658Q5TYW1 1059 aaPredicted RBP13.61□□□□□ -0.23
HMGCL-202ENST00000374487 RIOX1Q9H6W3 641 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 BIN2Q9UBW5 565 aaPredicted RBP13.61□□□□□ -0.23
HMGCL-202ENST00000374487 TRPM7Q96QT4 1865 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 hCG_1984214I3L0E3 225 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 ARHGAP6O43182 974 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 TUBB4AP04350 444 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 OR52Z1P0C646 297 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 ADKP55263 362 aaKnown RBP13.61□□□□□ -0.23
HMGCL-202ENST00000374487 PAK1Q13153 545 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 CDKAL1Q5VV42 579 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 JAKMIP3Q5VZ66 844 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 ZNF713Q8N859 430 aaPredicted RBP13.61□□□□□ -0.23
HMGCL-202ENST00000374487 TBCKQ8TEA7 893 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 AK8Q96MA6 479 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 PLIN2Q99541 437 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 CCSER1Q9C0I3 900 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 GPCPD1Q9NPB8 672 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 RWDD2AQ9UIY3 292 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 PLIN4Q96Q06 1357 aa13.61□□□□□ -0.23
HMGCL-202ENST00000374487 CDK5RAP2Q96SN8 1893 aa13.6□□□□□ -0.23
HMGCL-202ENST00000374487 RASSF10A6NK89 507 aa13.6□□□□□ -0.23
HMGCL-202ENST00000374487 ZSCAN12O43309 604 aa13.6□□□□□ -0.23
HMGCL-202ENST00000374487 ATP2B2Q01814 1243 aa13.6□□□□□ -0.23
HMGCL-202ENST00000374487 PPFIBP1Q86W92 1011 aa13.6□□□□□ -0.23
HMGCL-202ENST00000374487 ZNF710Q8N1W2 664 aa13.6□□□□□ -0.23
HMGCL-202ENST00000374487 C2orf69Q8N8R5 385 aa13.6□□□□□ -0.23
HMGCL-202ENST00000374487 ANKRD20A12PQ8NF67 263 aa13.6□□□□□ -0.23
HMGCL-202ENST00000374487 MYH1P12882 1939 aa13.6□□□□□ -0.23
HMGCL-202ENST00000374487 STX10O60499 249 aa13.59□□□□□ -0.23
HMGCL-202ENST00000374487 COBLO75128 1261 aa13.59□□□□□ -0.23
HMGCL-202ENST00000374487 MKRN3Q13064 507 aaKnown RBP13.59□□□□□ -0.23
HMGCL-202ENST00000374487 MIGA2Q7L4E1 593 aa13.59□□□□□ -0.23
HMGCL-202ENST00000374487 SH3BP5LQ7L8J4 393 aa13.59□□□□□ -0.23
HMGCL-202ENST00000374487 FCHSD1Q86WN1 690 aa13.59□□□□□ -0.23
HMGCL-202ENST00000374487 CLEC10AQ8IUN9 316 aa13.59□□□□□ -0.23
HMGCL-202ENST00000374487 CREBRFQ8IUR6 639 aa13.59□□□□□ -0.23
HMGCL-202ENST00000374487 NELFBQ8WX92 580 aa13.59□□□□□ -0.23
HMGCL-202ENST00000374487 CLMNQ96JQ2 1002 aa13.59□□□□□ -0.23
HMGCL-202ENST00000374487 MAPK8IP1Q9UQF2 711 aa13.59□□□□□ -0.23
HMGCL-202ENST00000374487 IGKV6D-41A0A0C4DH26 115 aa13.59□□□□□ -0.23
HMGCL-202ENST00000374487 ESYT2A0FGR8 921 aa13.59□□□□□ -0.23
HMGCL-202ENST00000374487 TEX33O43247 280 aa13.59□□□□□ -0.23
HMGCL-202ENST00000374487 MYL1P05976 194 aa13.59□□□□□ -0.23
HMGCL-202ENST00000374487 ADCY7P51828 1080 aa13.59□□□□□ -0.23
HMGCL-202ENST00000374487 NAALADL2Q58DX5 795 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms