RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 XBP1P17861 261 aa17.89■□□□□ 0.45
PRPF38B-202ENST00000370022 NAPAP54920 295 aa17.89■□□□□ 0.45
PRPF38B-202ENST00000370022 SMARCC2Q8TAQ2 1214 aa17.89■□□□□ 0.45
PRPF38B-202ENST00000370022 RAET1EQ8TD07 263 aa17.89■□□□□ 0.45
PRPF38B-202ENST00000370022 ORC3Q9UBD5 711 aaPredicted RBP17.89■□□□□ 0.45
PRPF38B-202ENST00000370022 PTPN22Q9Y2R2 807 aa17.89■□□□□ 0.45
PRPF38B-202ENST00000370022 CASP8AP2Q9UKL3 1982 aa17.89■□□□□ 0.45
PRPF38B-202ENST00000370022 ESYT2A0FGR8 921 aa17.88■□□□□ 0.45
PRPF38B-202ENST00000370022 GCOM1H8Y6P7 765 aaPredicted RBP17.88■□□□□ 0.45
PRPF38B-202ENST00000370022 PIK3CDO00329 1044 aa17.88■□□□□ 0.45
PRPF38B-202ENST00000370022 PPFIA3O75145 1194 aa17.88■□□□□ 0.45
PRPF38B-202ENST00000370022 POLR2MP0CAP2 368 aa17.88■□□□□ 0.45
PRPF38B-202ENST00000370022 HSD17B4P51659 736 aa17.88■□□□□ 0.45
PRPF38B-202ENST00000370022 RPS6P62753 249 aaKnown RBP17.88■□□□□ 0.45
PRPF38B-202ENST00000370022 BAATQ14032 418 aaPredicted RBP17.88■□□□□ 0.45
PRPF38B-202ENST00000370022 ZNF792Q3KQV3 632 aa17.88■□□□□ 0.45
PRPF38B-202ENST00000370022 HSCBQ8IWL3 235 aa17.88■□□□□ 0.45
PRPF38B-202ENST00000370022 PXYLP1Q8TE99 480 aa17.88■□□□□ 0.45
PRPF38B-202ENST00000370022 PSTPIP2Q9H939 334 aa17.88■□□□□ 0.45
PRPF38B-202ENST00000370022 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.88■□□□□ 0.45
PRPF38B-202ENST00000370022 COBLO75128 1261 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 CFBP00751 764 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 PGK2P07205 417 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 CYP2B6P20813 491 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 MRPL12P52815 198 aaKnown RBP17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 FBXO46Q6PJ61 603 aaPredicted RBP17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 ZNF467Q7Z7K2 595 aaPredicted RBP17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 FAM133AQ8N9E0 248 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 CUL5Q93034 780 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 ADD3Q9UEY8 706 aaKnown RBP17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 LOC102724159A0A0B4J2E5 919 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 JAK2O60674 1132 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 FDPSP14324 419 aaKnown RBP17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 CALML3P27482 149 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 GNA11P29992 359 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 CUL4AQ13619 759 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 PWP2Q15269 919 aaKnown RBP17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 TYW1BQ6NUM6 668 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 SLC30A10Q6XR72 485 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 MSL3Q8N5Y2 521 aaKnown RBP17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 SLAIN1Q8ND83 568 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 DNERQ8NFT8 737 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 ZMYND12Q9H0C1 365 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 C6orf50Q9HD87 102 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 RIC8AQ9NPQ8 531 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 KIF3AQ9Y496 699 aa17.87■□□□□ 0.45
PRPF38B-202ENST00000370022 SMCO2A6NFE2 343 aa17.86■□□□□ 0.45
PRPF38B-202ENST00000370022 ADCY7P51828 1080 aa17.86■□□□□ 0.45
PRPF38B-202ENST00000370022 OLFML2BQ68BL8 750 aa17.86■□□□□ 0.45
PRPF38B-202ENST00000370022 SYTL5Q8TDW5 730 aaPredicted RBP17.86■□□□□ 0.45
PRPF38B-202ENST00000370022 MAML3Q96JK9 1138 aa17.86■□□□□ 0.45
PRPF38B-202ENST00000370022 VPS54Q9P1Q0 977 aa17.86■□□□□ 0.45
PRPF38B-202ENST00000370022 PTCH2Q9Y6C5 1203 aa17.86■□□□□ 0.45
PRPF38B-202ENST00000370022 RBBP6Q7Z6E9 1792 aaKnown RBP17.86■□□□□ 0.45
PRPF38B-202ENST00000370022 ADCY3O60266 1144 aa17.85■□□□□ 0.45
PRPF38B-202ENST00000370022 MCTP2Q6DN12 878 aa17.85■□□□□ 0.45
PRPF38B-202ENST00000370022 GALNT17Q6IS24 598 aa17.85■□□□□ 0.45
PRPF38B-202ENST00000370022 FAM184AQ8NB25 1140 aa17.85■□□□□ 0.45
PRPF38B-202ENST00000370022 NPLOC4Q8TAT6 608 aa17.85■□□□□ 0.45
PRPF38B-202ENST00000370022 BICD2Q8TD16 824 aa17.85■□□□□ 0.45
PRPF38B-202ENST00000370022 TBC1D5Q92609 795 aa17.85■□□□□ 0.45
PRPF38B-202ENST00000370022 INTS4Q96HW7 963 aaKnown RBP17.85■□□□□ 0.45
PRPF38B-202ENST00000370022 MPHOSPH6Q99547 160 aaKnown RBP17.85■□□□□ 0.45
PRPF38B-202ENST00000370022 ALG1Q9BT22 464 aa17.85■□□□□ 0.45
PRPF38B-202ENST00000370022 SMCHD1A6NHR9 2005 aa17.85■□□□□ 0.45
PRPF38B-202ENST00000370022 B4DLN1 442 aa17.84■□□□□ 0.45
PRPF38B-202ENST00000370022 MEIS2O14770 477 aa17.84■□□□□ 0.45
PRPF38B-202ENST00000370022 CNTN2Q02246 1040 aa17.84■□□□□ 0.45
PRPF38B-202ENST00000370022 MAMDC4Q6UXC1 1216 aa17.84■□□□□ 0.45
PRPF38B-202ENST00000370022 ASB14A6NK59 587 aa17.83■□□□□ 0.45
PRPF38B-202ENST00000370022 HOXA13P31271 388 aaPredicted RBP17.83■□□□□ 0.45
PRPF38B-202ENST00000370022 GRK4P32298 578 aa17.83■□□□□ 0.45
PRPF38B-202ENST00000370022 NLRP5P59047 1200 aa17.83■□□□□ 0.45
PRPF38B-202ENST00000370022 TRIM29Q14134 588 aa17.83■□□□□ 0.45
PRPF38B-202ENST00000370022 NSUN6Q8TEA1 469 aaKnown RBP17.83■□□□□ 0.45
PRPF38B-202ENST00000370022 SYNGAP1Q96PV0 1343 aa17.83■□□□□ 0.44
PRPF38B-202ENST00000370022 DOCK3Q8IZD9 2030 aa17.83■□□□□ 0.44
PRPF38B-202ENST00000370022 SOWAHBA6NEL2 793 aa17.83■□□□□ 0.44
PRPF38B-202ENST00000370022 FOSP01100 380 aaPredicted RBP17.83■□□□□ 0.44
PRPF38B-202ENST00000370022 IGHA2P01877 340 aa17.83■□□□□ 0.44
PRPF38B-202ENST00000370022 ALDH5A1P51649 535 aaPredicted RBP17.83■□□□□ 0.44
PRPF38B-202ENST00000370022 AP3B2Q13367 1082 aa17.83■□□□□ 0.44
PRPF38B-202ENST00000370022 MFSD14CQ5VZR4 134 aa17.83■□□□□ 0.44
PRPF38B-202ENST00000370022 USP17L6PQ6QN14 398 aa17.83■□□□□ 0.44
PRPF38B-202ENST00000370022 TRIB2Q92519 343 aa17.83■□□□□ 0.44
PRPF38B-202ENST00000370022 FGD4Q96M96 766 aa17.83■□□□□ 0.44
PRPF38B-202ENST00000370022 AIFM3Q96NN9 605 aa17.83■□□□□ 0.44
PRPF38B-202ENST00000370022 RMDN3Q96TC7 470 aa17.83■□□□□ 0.44
PRPF38B-202ENST00000370022 TINF2Q9BSI4 451 aa17.83■□□□□ 0.44
PRPF38B-202ENST00000370022 SMC3Q9UQE7 1217 aa17.83■□□□□ 0.44
PRPF38B-202ENST00000370022 SPDYE3A6NKU9 549 aa17.82■□□□□ 0.44
PRPF38B-202ENST00000370022 HMGCRP04035 888 aa17.82■□□□□ 0.44
PRPF38B-202ENST00000370022 CCL14Q16627 93 aa17.82■□□□□ 0.44
PRPF38B-202ENST00000370022 SLC9C1Q4G0N8 1177 aa17.82■□□□□ 0.44
PRPF38B-202ENST00000370022 DAGLBQ8NCG7 672 aa17.82■□□□□ 0.44
PRPF38B-202ENST00000370022 IWS1Q96ST2 819 aa17.82■□□□□ 0.44
PRPF38B-202ENST00000370022 PHF20Q9BVI0 1012 aa17.82■□□□□ 0.44
PRPF38B-202ENST00000370022 COL20A1Q9P218 1284 aa17.82■□□□□ 0.44
PRPF38B-202ENST00000370022 PCDHA4Q9UN74 947 aa17.82■□□□□ 0.44
PRPF38B-202ENST00000370022 ZNFX1Q9P2E3 1918 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms