RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 PARP2Q9UGN5 583 aa17.57■□□□□ 0.4
PTPN11-201ENST00000351677 SOWAHDA6NJG2 315 aa17.57■□□□□ 0.4
PTPN11-201ENST00000351677 SNX16P57768 344 aa17.57■□□□□ 0.4
PTPN11-201ENST00000351677 DIXDC1Q155Q3 683 aa17.57■□□□□ 0.4
PTPN11-201ENST00000351677 ODR4Q5SWX8 454 aa17.57■□□□□ 0.4
PTPN11-201ENST00000351677 PNMA8AQ86V59 439 aaPredicted RBP17.57■□□□□ 0.4
PTPN11-201ENST00000351677 CUEDC2Q9H467 287 aa17.57■□□□□ 0.4
PTPN11-201ENST00000351677 LARSQ9P2J5 1176 aaKnown RBP17.57■□□□□ 0.4
PTPN11-201ENST00000351677 TBC1D10BQ4KMP7 808 aaPredicted RBP17.57■□□□□ 0.4
PTPN11-201ENST00000351677 ANAPC4Q9UJX5 808 aa17.57■□□□□ 0.4
PTPN11-201ENST00000351677 USP17L3A6NCW0 530 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 USP17L4A6NCW7 530 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 NR2F2P24468 414 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 MECOMQ03112 1051 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 BRDTQ58F21 947 aaPredicted RBP17.56■□□□□ 0.4
PTPN11-201ENST00000351677 USP17L1Q7RTZ2 530 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 SRGAP1Q7Z6B7 1085 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 DHTKD1Q96HY7 919 aaPredicted RBP17.56■□□□□ 0.4
PTPN11-201ENST00000351677 RSRC1Q96IZ7 334 aaKnown RBP17.56■□□□□ 0.4
PTPN11-201ENST00000351677 PDE11AQ9HCR9 933 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 ABCC12Q96J65 1359 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 PPFIBP2Q8ND30 876 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 ACRBPQ8NEB7 543 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 C1orf112Q9NSG2 853 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 SRPRBQ9Y5M8 271 aaKnown RBP17.56■□□□□ 0.4
PTPN11-201ENST00000351677 CDC42BPAQ5VT25 1732 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 ERVV-1B6SEH8 477 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 PDE6CP51160 858 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 CCDC110Q8TBZ0 833 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 PRPF3O43395 683 aaKnown RBP17.56■□□□□ 0.4
PTPN11-201ENST00000351677 GDF11O95390 407 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 GPATCH4Q5T3I0 446 aaKnown RBP17.56■□□□□ 0.4
PTPN11-201ENST00000351677 LRCH2Q5VUJ6 765 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 SMC1BQ8NDV3 1235 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 AK8Q96MA6 479 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 CYP27B1O15528 508 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 EEF1GP26641 437 aaKnown RBP17.56■□□□□ 0.4
PTPN11-201ENST00000351677 TNFAIP1Q13829 316 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 NAA25Q14CX7 972 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 ODF2LQ9ULJ1 636 aa17.56■□□□□ 0.4
PTPN11-201ENST00000351677 ZMYND10O75800 440 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 ATP1A3P13637 1013 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 ADCY8P40145 1251 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 GUCY2DQ02846 1103 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 GKAP1Q5VSY0 366 aaPredicted RBP17.55■□□□□ 0.4
PTPN11-201ENST00000351677 DBNDD1Q9H9R9 158 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 SERPINB2P05120 415 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 AS3MTQ9HBK9 375 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 MEIS1O00470 390 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 N4BP1O75113 896 aaKnown RBP17.55■□□□□ 0.4
PTPN11-201ENST00000351677 PLEKHA8P1O95397 391 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 ARHGAP25P42331 645 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 PAGE5Q96GU1 130 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 MKRN1Q9UHC7 482 aaKnown RBP17.55■□□□□ 0.4
PTPN11-201ENST00000351677 TRPC6Q9Y210 931 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 BSPRYQ5W0U4 402 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 CSRNP1Q96S65 589 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 SRP68Q9UHB9 627 aaKnown RBP17.55■□□□□ 0.4
PTPN11-201ENST00000351677 FEZ2Q9UHY8 353 aaPredicted RBP17.55■□□□□ 0.4
PTPN11-201ENST00000351677 SNAP23O00161 211 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 DMP1Q13316 513 aaPredicted RBP17.55■□□□□ 0.4
PTPN11-201ENST00000351677 NEDD9Q14511 834 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 CAPN12Q6ZSI9 719 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 MCF2L2Q86YR7 1114 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 ARHGEF2Q92974 986 aaKnown RBP17.55■□□□□ 0.4
PTPN11-201ENST00000351677 GPR101Q96P66 508 aaPredicted RBP17.55■□□□□ 0.4
PTPN11-201ENST00000351677 KRT12Q99456 494 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 SUGCTQ9HAC7 445 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 BCS1LQ9Y276 419 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 TTLL3Q9Y4R7 772 aa17.55■□□□□ 0.4
PTPN11-201ENST00000351677 FOSP01100 380 aaPredicted RBP17.54■□□□□ 0.4
PTPN11-201ENST00000351677 LIFRP42702 1097 aa17.54■□□□□ 0.4
PTPN11-201ENST00000351677 RABGGTAQ92696 567 aa17.54■□□□□ 0.4
PTPN11-201ENST00000351677 RAB20Q9NX57 234 aa17.54■□□□□ 0.4
PTPN11-201ENST00000351677 RSAD2Q8WXG1 361 aa17.54■□□□□ 0.4
PTPN11-201ENST00000351677 STRBPQ96SI9 672 aaKnown RBP17.54■□□□□ 0.4
PTPN11-201ENST00000351677 GOLGA8KD6RF30 607 aa17.54■□□□□ 0.4
PTPN11-201ENST00000351677 ATF7P17544 494 aaPredicted RBP17.54■□□□□ 0.4
PTPN11-201ENST00000351677 CCDC17Q96LX7 622 aa17.54■□□□□ 0.4
PTPN11-201ENST00000351677 MYL7Q01449 175 aa17.54■□□□□ 0.4
PTPN11-201ENST00000351677 SYNE4Q8N205 404 aa17.54■□□□□ 0.4
PTPN11-201ENST00000351677 ENOX1Q8TC92 643 aaKnown RBP17.54■□□□□ 0.4
PTPN11-201ENST00000351677 KCNG1Q9UIX4 513 aa17.54■□□□□ 0.4
PTPN11-201ENST00000351677 TTC19Q6DKK2 380 aaPredicted RBP17.54■□□□□ 0.4
PTPN11-201ENST00000351677 VSTM4Q8IW00 320 aa17.54■□□□□ 0.4
PTPN11-201ENST00000351677 SMCR8Q8TEV9 937 aaPredicted RBP17.54■□□□□ 0.4
PTPN11-201ENST00000351677 ARID5BQ14865 1188 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 KRT26Q7Z3Y9 468 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 TBC1D10CQ8IV04 446 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 VPS52Q8N1B4 723 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 ANKFY1Q9P2R3 1169 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 STX2P32856 288 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 UBE2SQ16763 222 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 SCYL2Q6P3W7 929 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 RWDD2AQ9UIY3 292 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 AXIN2Q9Y2T1 843 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 LRRIQ4A6NIV6 560 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 CLIC2O15247 247 aa17.53■□□□□ 0.4
PTPN11-201ENST00000351677 BUB1BO60566 1050 aaPredicted RBP17.53■□□□□ 0.4
PTPN11-201ENST00000351677 CTAGE3PQ8IX95 158 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms