RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 CCDC196A0A1B0GTZ2 297 aa13.11□□□□□ -0.31
SLC28A1-202ENST00000338602 SOWAHBA6NEL2 793 aa13.11□□□□□ -0.31
SLC28A1-202ENST00000338602 SNAI1O95863 264 aaPredicted RBP13.11□□□□□ -0.31
SLC28A1-202ENST00000338602 ZNF865P0CJ78 1059 aaPredicted RBP13.11□□□□□ -0.31
SLC28A1-202ENST00000338602 TAL1P17542 331 aaPredicted RBP13.11□□□□□ -0.31
SLC28A1-202ENST00000338602 RPS6KB1P23443 525 aa13.11□□□□□ -0.31
SLC28A1-202ENST00000338602 RCAN1P53805 252 aa13.11□□□□□ -0.31
SLC28A1-202ENST00000338602 APOA5Q6Q788 366 aa13.11□□□□□ -0.31
SLC28A1-202ENST00000338602 DPF3Q92784 378 aa13.11□□□□□ -0.31
SLC28A1-202ENST00000338602 PAWRQ96IZ0 340 aaKnown RBP13.11□□□□□ -0.31
SLC28A1-202ENST00000338602 TCEANC2Q96MN5 208 aa13.11□□□□□ -0.31
SLC28A1-202ENST00000338602 C11orf49Q9H6J7 331 aa13.11□□□□□ -0.31
SLC28A1-202ENST00000338602 SPC25Q9HBM1 224 aa13.11□□□□□ -0.31
SLC28A1-202ENST00000338602 CYP46A1Q9Y6A2 500 aa13.11□□□□□ -0.31
SLC28A1-202ENST00000338602 KBTBD13C9JR72 458 aa13.1□□□□□ -0.31
SLC28A1-202ENST00000338602 CYTH3O43739 400 aa13.1□□□□□ -0.31
SLC28A1-202ENST00000338602 CFBP00751 764 aa13.1□□□□□ -0.31
SLC28A1-202ENST00000338602 MYCNP04198 464 aaPredicted RBP13.1□□□□□ -0.31
SLC28A1-202ENST00000338602 RXRAP19793 462 aa13.1□□□□□ -0.31
SLC28A1-202ENST00000338602 ALDH5A1P51649 535 aaPredicted RBP13.1□□□□□ -0.31
SLC28A1-202ENST00000338602 PDE4DQ08499 809 aa13.1□□□□□ -0.31
SLC28A1-202ENST00000338602 RTN1Q16799 776 aa13.1□□□□□ -0.31
SLC28A1-202ENST00000338602 SLC30A10Q6XR72 485 aa13.1□□□□□ -0.31
SLC28A1-202ENST00000338602 Q6ZUG5 572 aa13.1□□□□□ -0.31
SLC28A1-202ENST00000338602 RNF180Q86T96 592 aa13.1□□□□□ -0.31
SLC28A1-202ENST00000338602 PIBF1Q8WXW3 757 aa13.1□□□□□ -0.31
SLC28A1-202ENST00000338602 FGD4Q96M96 766 aa13.1□□□□□ -0.31
SLC28A1-202ENST00000338602 TM6SF1Q9BZW5 370 aa13.1□□□□□ -0.31
SLC28A1-202ENST00000338602 VTA1Q9NP79 307 aa13.1□□□□□ -0.31
SLC28A1-202ENST00000338602 XPNPEP3Q9NQH7 507 aa13.1□□□□□ -0.31
SLC28A1-202ENST00000338602 GOLGA8AA7E2F4 631 aa13.09□□□□□ -0.31
SLC28A1-202ENST00000338602 GOLGA8BA8MQT2 603 aa13.09□□□□□ -0.31
SLC28A1-202ENST00000338602 DNM1LO00429 736 aa13.09□□□□□ -0.31
SLC28A1-202ENST00000338602 COL9A3Q14050 684 aaPredicted RBP13.09□□□□□ -0.31
SLC28A1-202ENST00000338602 ANO1Q5XXA6 986 aa13.09□□□□□ -0.31
SLC28A1-202ENST00000338602 TMTC3Q6ZXV5 915 aa13.09□□□□□ -0.31
SLC28A1-202ENST00000338602 NOL8Q76FK4 1167 aaKnown RBP13.09□□□□□ -0.31
SLC28A1-202ENST00000338602 RUFY3Q7L099 469 aa13.09□□□□□ -0.31
SLC28A1-202ENST00000338602 UBE2Q1Q7Z7E8 422 aa13.09□□□□□ -0.31
SLC28A1-202ENST00000338602 FBXL16Q8N461 479 aa13.09□□□□□ -0.31
SLC28A1-202ENST00000338602 NSUN6Q8TEA1 469 aaKnown RBP13.09□□□□□ -0.31
SLC28A1-202ENST00000338602 BRF1Q92994 677 aa13.09□□□□□ -0.31
SLC28A1-202ENST00000338602 ZSWIM6Q9HCJ5 1215 aa13.09□□□□□ -0.31
SLC28A1-202ENST00000338602 GCOM1H8Y6P7 765 aaPredicted RBP13.08□□□□□ -0.31
SLC28A1-202ENST00000338602 DUSP11O75319 330 aaKnown RBP13.08□□□□□ -0.31
SLC28A1-202ENST00000338602 PLEKHA8P1O95397 391 aa13.08□□□□□ -0.31
SLC28A1-202ENST00000338602 POLR2MP0CAP2 368 aa13.08□□□□□ -0.31
SLC28A1-202ENST00000338602 CPA1P15085 419 aa13.08□□□□□ -0.31
SLC28A1-202ENST00000338602 METAP2P50579 478 aaKnown RBP eCLIP13.08□□□□□ -0.31
SLC28A1-202ENST00000338602 ANAPC15P60006 121 aa13.08□□□□□ -0.31
SLC28A1-202ENST00000338602 CCDC144BQ3MJ40 725 aa13.08□□□□□ -0.31
SLC28A1-202ENST00000338602 IQSEC1Q6DN90 963 aa13.08□□□□□ -0.31
SLC28A1-202ENST00000338602 RAB11FIP4Q86YS3 637 aa13.08□□□□□ -0.31
SLC28A1-202ENST00000338602 SRBD1Q8N5C6 995 aaKnown RBP13.08□□□□□ -0.31
SLC28A1-202ENST00000338602 SYTL5Q8TDW5 730 aaPredicted RBP13.08□□□□□ -0.31
SLC28A1-202ENST00000338602 MORC4Q8TE76 937 aa13.08□□□□□ -0.31
SLC28A1-202ENST00000338602 CUL5Q93034 780 aa13.08□□□□□ -0.31
SLC28A1-202ENST00000338602 IWS1Q96ST2 819 aa13.08□□□□□ -0.31
SLC28A1-202ENST00000338602 BRPF3Q9ULD4 1205 aa13.08□□□□□ -0.31
SLC28A1-202ENST00000338602 NR2E3Q9Y5X4 410 aa13.08□□□□□ -0.31
SLC28A1-202ENST00000338602 MYH6P13533 1939 aa13.08□□□□□ -0.32
SLC28A1-202ENST00000338602 PPP1R11O60927 126 aaPredicted RBP13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 TNFAIP2Q03169 654 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 APOBRQ0VD83 1088 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 GJC2Q5T442 439 aaPredicted RBP13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 ARHGEF16Q5VV41 709 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 EEPD1Q7L9B9 569 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 CCDC82Q8N4S0 544 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 DIS3LQ8TF46 1054 aaKnown RBP13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 PURBQ96QR8 312 aaKnown RBP13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 RMDN3Q96TC7 470 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 AP5M1Q9H0R1 490 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 BRCA2P51587 3418 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 SMCHD1A6NHR9 2005 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 EVI5O60447 810 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 MNX1P50219 401 aaPredicted RBP13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 HSD17B4P51659 736 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 GHRHRQ02643 423 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 LRRC41Q15345 812 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 STXBP2Q15833 593 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 SLC35G1Q2M3R5 365 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 FBXO16Q8IX29 292 aaPredicted RBP13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 CMTR1Q8N1G2 835 aaKnown RBP13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 TBC1D5Q92609 795 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 AGXT2Q9BYV1 514 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 SENP6Q9GZR1 1112 aaPredicted RBP13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 KATNBL1Q9H079 304 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 PDRG1Q9NUG6 133 aa13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 RBM27Q9P2N5 1060 aaKnown RBP13.07□□□□□ -0.32
SLC28A1-202ENST00000338602 ASTN1O14525 1302 aa13.06□□□□□ -0.32
SLC28A1-202ENST00000338602 BAZ2BQ9UIF8 2168 aaKnown RBP13.06□□□□□ -0.32
SLC28A1-202ENST00000338602 PGK1P00558 417 aa13.06□□□□□ -0.32
SLC28A1-202ENST00000338602 C6orf222P0C671 652 aaPredicted RBP13.06□□□□□ -0.32
SLC28A1-202ENST00000338602 EDNRBP24530 442 aa13.06□□□□□ -0.32
SLC28A1-202ENST00000338602 ADCYAP1R1P41586 468 aa13.06□□□□□ -0.32
SLC28A1-202ENST00000338602 AKAP17AQ02040 695 aaKnown RBP13.06□□□□□ -0.32
SLC28A1-202ENST00000338602 PCSK9Q8NBP7 692 aaKnown RBP13.06□□□□□ -0.32
SLC28A1-202ENST00000338602 SMARCC2Q8TAQ2 1214 aa13.06□□□□□ -0.32
SLC28A1-202ENST00000338602 TAAR1Q96RJ0 339 aa13.06□□□□□ -0.32
SLC28A1-202ENST00000338602 TSEN34Q9BSV6 310 aaKnown RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms