RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 SPDYE3A6NKU9 549 aa16.78■□□□□ 0.28
CDK5RAP3-201ENST00000338399 SPDYE16A6NNV3 312 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP3-201ENST00000338399 ITGBL1O95965 494 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP3-201ENST00000338399 NDUFA8P51970 172 aa16.78■□□□□ 0.28
CDK5RAP3-201ENST00000338399 SPECC1Q5M775 1068 aa16.78■□□□□ 0.28
CDK5RAP3-201ENST00000338399 MCTP2Q6DN12 878 aa16.78■□□□□ 0.28
CDK5RAP3-201ENST00000338399 REPS2Q8NFH8 660 aa16.78■□□□□ 0.28
CDK5RAP3-201ENST00000338399 ENGASEQ8NFI3 743 aa16.78■□□□□ 0.28
CDK5RAP3-201ENST00000338399 TMEM60Q9H2L4 133 aa16.78■□□□□ 0.28
CDK5RAP3-201ENST00000338399 TRPM7Q96QT4 1865 aa16.77■□□□□ 0.28
CDK5RAP3-201ENST00000338399 GCOM1H8Y6P7 765 aaPredicted RBP16.77■□□□□ 0.27
CDK5RAP3-201ENST00000338399 FOSP01100 380 aaPredicted RBP16.77■□□□□ 0.27
CDK5RAP3-201ENST00000338399 POLR2MP0CAP2 368 aa16.77■□□□□ 0.27
CDK5RAP3-201ENST00000338399 FAM160A1Q05DH4 1040 aa16.77■□□□□ 0.27
CDK5RAP3-201ENST00000338399 SNW1Q13573 536 aaKnown RBP16.77■□□□□ 0.27
CDK5RAP3-201ENST00000338399 RESP18Q5W5W9 173 aa16.77■□□□□ 0.27
CDK5RAP3-201ENST00000338399 FCHSD1Q86WN1 690 aa16.77■□□□□ 0.27
CDK5RAP3-201ENST00000338399 FERMT2Q96AC1 680 aa16.77■□□□□ 0.27
CDK5RAP3-201ENST00000338399 CSRNP2Q9H175 543 aa16.77■□□□□ 0.27
CDK5RAP3-201ENST00000338399 HOMER2Q9NSB8 354 aa16.77■□□□□ 0.27
CDK5RAP3-201ENST00000338399 MYPNQ86TC9 1320 aa16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 TDP2O95551 362 aa16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 PFKFB1P16118 471 aa16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 HOXA7P31268 230 aaPredicted RBP16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 CST9Q5W186 159 aa16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 ZNF579Q8NAF0 562 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 CLEC4DQ8WXI8 215 aa16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 DDX19AQ9NUU7 478 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 PNMA2Q9UL42 364 aa16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 VWA3AA6NCI4 1184 aa16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 NFIBO00712 420 aa16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 NEMFO60524 1076 aa16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 MOGSQ13724 837 aa16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 TMEM132BQ14DG7 1078 aa16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 IL17AQ16552 155 aa16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 MUM1L1Q5H9M0 696 aa16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 ARL6IP4Q66PJ3 421 aaKnown RBP16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 FMR1NBQ8N0W7 255 aaPredicted RBP16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 TRERF1Q96PN7 1200 aa16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 AGTPBP1Q9UPW5 1226 aa16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 RIPK3Q9Y572 518 aa16.76■□□□□ 0.27
CDK5RAP3-201ENST00000338399 SYCE3A1L190 88 aa16.75■□□□□ 0.27
CDK5RAP3-201ENST00000338399 OAZ1P54368 228 aa16.75■□□□□ 0.27
CDK5RAP3-201ENST00000338399 ORC2Q13416 577 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-201ENST00000338399 SNAPC2Q13487 334 aa16.75■□□□□ 0.27
CDK5RAP3-201ENST00000338399 GSE1Q14687 1217 aa16.75■□□□□ 0.27
CDK5RAP3-201ENST00000338399 CAMK4Q16566 473 aa16.75■□□□□ 0.27
CDK5RAP3-201ENST00000338399 SNRNP48Q6IEG0 339 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-201ENST00000338399 FASTKD5Q7L8L6 764 aaKnown RBP16.75■□□□□ 0.27
CDK5RAP3-201ENST00000338399 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
CDK5RAP3-201ENST00000338399 TEX2Q8IWB9 1127 aa16.75■□□□□ 0.27
CDK5RAP3-201ENST00000338399 NUP62CLQ9H1M0 184 aa16.75■□□□□ 0.27
CDK5RAP3-201ENST00000338399 ZNF214Q9UL59 606 aaPredicted RBP16.75■□□□□ 0.27
CDK5RAP3-201ENST00000338399 RBBP6Q7Z6E9 1792 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-201ENST00000338399 LAD1O00515 517 aa16.74■□□□□ 0.27
CDK5RAP3-201ENST00000338399 SLC37A4O43826 429 aa16.74■□□□□ 0.27
CDK5RAP3-201ENST00000338399 USP11P51784 963 aa16.74■□□□□ 0.27
CDK5RAP3-201ENST00000338399 IRX3P78415 501 aaPredicted RBP16.74■□□□□ 0.27
CDK5RAP3-201ENST00000338399 ARHGAP4P98171 946 aa16.74■□□□□ 0.27
CDK5RAP3-201ENST00000338399 MKRN3Q13064 507 aaKnown RBP16.74■□□□□ 0.27
CDK5RAP3-201ENST00000338399 PPP4R3AQ6IN85 833 aa16.74■□□□□ 0.27
CDK5RAP3-201ENST00000338399 MCF2L2Q86YR7 1114 aa16.74■□□□□ 0.27
CDK5RAP3-201ENST00000338399 CLSTN2Q9H4D0 955 aa16.74■□□□□ 0.27
CDK5RAP3-201ENST00000338399 FAM13BQ9NYF5 915 aa16.74■□□□□ 0.27
CDK5RAP3-201ENST00000338399 HPSEQ9Y251 543 aa16.74■□□□□ 0.27
CDK5RAP3-201ENST00000338399 FAM237AA0A1B0GTK4 181 aa16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 KINO60870 393 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 OR52Z1P0C646 297 aa16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 SREBF1P36956 1147 aa16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 HSD17B4P51659 736 aa16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 PLS1Q14651 629 aa16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 DTHD1Q6ZMT9 781 aa16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 USP49Q70CQ1 688 aa16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 CRYGNQ8WXF5 182 aa16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 RNF146Q9NTX7 359 aa16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 ATP2A1O14983 1001 aa16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 ZNF202O95125 648 aa16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 PRPHP41219 470 aa16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 SYKP43405 635 aa16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 GPAT2Q6NUI2 795 aa16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 POTEEQ6S8J3 1075 aa16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 EPSTI1Q96J88 318 aa16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 NAP1L4Q99733 375 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 TEX13BQ9BXU2 312 aa16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 ASCC2Q9H1I8 757 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 GPBP1L1Q9HC44 474 aaPredicted RBP16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 DDX25Q9UHL0 483 aaKnown RBP16.73■□□□□ 0.27
CDK5RAP3-201ENST00000338399 A0A0G2JMZ2 1700 aa16.72■□□□□ 0.27
CDK5RAP3-201ENST00000338399 GCFC2P16383 781 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-201ENST00000338399 STAT3P40763 770 aa16.72■□□□□ 0.27
CDK5RAP3-201ENST00000338399 ZNF445P59923 1031 aa16.72■□□□□ 0.27
CDK5RAP3-201ENST00000338399 CALCRLQ16602 461 aa16.72■□□□□ 0.27
CDK5RAP3-201ENST00000338399 LBX2Q6XYB7 198 aa16.72■□□□□ 0.27
CDK5RAP3-201ENST00000338399 SYMPKQ92797 1274 aaKnown RBP16.72■□□□□ 0.27
CDK5RAP3-201ENST00000338399 TNMDQ9H2S6 317 aa16.72■□□□□ 0.27
CDK5RAP3-201ENST00000338399 KCNH3Q9ULD8 1083 aa16.72■□□□□ 0.27
CDK5RAP3-201ENST00000338399 PEX10O60683 326 aa16.71■□□□□ 0.27
CDK5RAP3-201ENST00000338399 LETM1O95202 739 aaPredicted RBP16.71■□□□□ 0.27
CDK5RAP3-201ENST00000338399 LONP1P36776 959 aaKnown RBP16.71■□□□□ 0.27
CDK5RAP3-201ENST00000338399 HERVK_113P62684 666 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms