RNA–Protein interactions for RNA: ENST00000308783.9

KDM2A-201, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best) BASIC

Gene KDM2A, Length 3,666 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-201ENST00000308783 KCNV2Q8TDN2 545 aa11.68□□□□□ -0.54
KDM2A-201ENST00000308783 DNAJC18Q9H819 358 aa11.68□□□□□ -0.54
KDM2A-201ENST00000308783 VAT1LQ9HCJ6 419 aa11.68□□□□□ -0.54
KDM2A-201ENST00000308783 SCAF8Q9UPN6 1271 aaKnown RBP11.68□□□□□ -0.54
KDM2A-201ENST00000308783 SUGT1Q9Y2Z0 365 aa11.68□□□□□ -0.54
KDM2A-201ENST00000308783 FRMPD2Q68DX3 1309 aaPredicted RBP11.67□□□□□ -0.54
KDM2A-201ENST00000308783 PFKFB1P16118 471 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 SPDL1Q96EA4 605 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 PRMT6Q96LA8 375 aaPredicted RBP11.67□□□□□ -0.54
KDM2A-201ENST00000308783 DNAJC25Q9H1X3 360 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 FOXP1Q9H334 677 aaPredicted RBP11.67□□□□□ -0.54
KDM2A-201ENST00000308783 FAM198AQ9UFP1 575 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 CCDC192P0DO97 292 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 SCG2P13521 617 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 PPP2R5BQ15173 497 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 SPDYE1Q8NFV5 336 aaPredicted RBP11.67□□□□□ -0.54
KDM2A-201ENST00000308783 BICD1Q96G01 975 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 ZDHHC15Q96MV8 337 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 BAG1Q99933 345 aaPredicted RBP11.67□□□□□ -0.54
KDM2A-201ENST00000308783 UBA5Q9GZZ9 404 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 SERPINB13Q9UIV8 391 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.67□□□□□ -0.54
KDM2A-201ENST00000308783 C10orf71Q711Q0 1435 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 USP17L5A8MUK1 530 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 SHMT1P34896 483 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 MCM6Q14566 821 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 RBM43Q6ZSC3 357 aaKnown RBP11.67□□□□□ -0.54
KDM2A-201ENST00000308783 HOMER1Q86YM7 354 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 ANKS1AQ92625 1134 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 TRIM5Q9C035 493 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 TCP11L1Q9NUJ3 509 aa11.67□□□□□ -0.54
KDM2A-201ENST00000308783 GRM4Q14833 912 aa11.66□□□□□ -0.54
KDM2A-201ENST00000308783 HSP90AA4PQ58FG1 418 aa11.66□□□□□ -0.54
KDM2A-201ENST00000308783 USP49Q70CQ1 688 aa11.66□□□□□ -0.54
KDM2A-201ENST00000308783 FILIP1Q7Z7B0 1213 aa11.66□□□□□ -0.54
KDM2A-201ENST00000308783 ZSCAN29Q8IWY8 852 aaPredicted RBP11.66□□□□□ -0.54
KDM2A-201ENST00000308783 EXOC8Q8IYI6 725 aa11.66□□□□□ -0.54
KDM2A-201ENST00000308783 STK24Q9Y6E0 443 aa11.66□□□□□ -0.54
KDM2A-201ENST00000308783 KLRF2D3W0D1 207 aa11.66□□□□□ -0.54
KDM2A-201ENST00000308783 ACTN3Q08043 901 aaPredicted RBP11.66□□□□□ -0.54
KDM2A-201ENST00000308783 PDCD2Q16342 344 aaPredicted RBP11.66□□□□□ -0.54
KDM2A-201ENST00000308783 PFKFB3Q16875 520 aaPredicted RBP11.66□□□□□ -0.54
KDM2A-201ENST00000308783 TRIM42Q8IWZ5 723 aa11.66□□□□□ -0.54
KDM2A-201ENST00000308783 FOCADQ5VW36 1801 aa11.66□□□□□ -0.54
KDM2A-201ENST00000308783 ZNF202O95125 648 aa11.66□□□□□ -0.54
KDM2A-201ENST00000308783 KRT2P35908 639 aa11.66□□□□□ -0.54
KDM2A-201ENST00000308783 NLRP5P59047 1200 aa11.66□□□□□ -0.54
KDM2A-201ENST00000308783 SDF4Q9BRK5 362 aa11.66□□□□□ -0.54
KDM2A-201ENST00000308783 ACBD3Q9H3P7 528 aa11.66□□□□□ -0.54
KDM2A-201ENST00000308783 CLIP2Q9UDT6 1046 aa11.66□□□□□ -0.54
KDM2A-201ENST00000308783 QSER1Q2KHR3 1735 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 A0A1W2PQ27 194 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 A0A1W2PQ64 194 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 A0A1W2PQD8 194 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 PALM3A6NDB9 673 aaPredicted RBP11.65□□□□□ -0.54
KDM2A-201ENST00000308783 CAVIN2O95810 425 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 KIF5BP33176 963 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 ZNF174Q15697 407 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 C16orf87Q6PH81 154 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 PIK3AP1Q6ZUJ8 805 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 C11orf57Q6ZUT1 292 aaPredicted RBP11.65□□□□□ -0.54
KDM2A-201ENST00000308783 TAX1BP1Q86VP1 789 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 LARGE2Q8N3Y3 721 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 ZNF287Q9HBT7 754 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 MTMR4Q9NYA4 1195 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 CLRN2A0PK11 232 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 PSMD14O00487 310 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 BIN1O00499 593 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 CFAP100Q494V2 611 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 HEATR3Q7Z4Q2 680 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 TNFRSF25Q93038 417 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 SHTN1A0MZ66 631 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 RAD21O60216 631 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 TBC1D25Q3MII6 688 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 KAT2BQ92831 832 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 CCDC102AQ96A19 550 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 EXOC4Q96A65 974 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 CBX8Q9HC52 389 aa11.65□□□□□ -0.54
KDM2A-201ENST00000308783 ZNF646O15015 1829 aaPredicted RBP11.65□□□□□ -0.55
KDM2A-201ENST00000308783 FOXN1O15353 648 aa11.64□□□□□ -0.55
KDM2A-201ENST00000308783 EIF3JO75822 258 aaKnown RBP11.64□□□□□ -0.55
KDM2A-201ENST00000308783 SSBP05455 408 aaKnown RBP eCLIP11.64□□□□□ -0.55
KDM2A-201ENST00000308783 PYGBP11216 843 aa11.64□□□□□ -0.55
KDM2A-201ENST00000308783 XBP1P17861 261 aa11.64□□□□□ -0.55
KDM2A-201ENST00000308783 CMA1P23946 247 aa11.64□□□□□ -0.55
KDM2A-201ENST00000308783 R3HDM1Q15032 1099 aaKnown RBP11.64□□□□□ -0.55
KDM2A-201ENST00000308783 CDAN1Q8IWY9 1227 aa11.64□□□□□ -0.55
KDM2A-201ENST00000308783 NRBP1Q9UHY1 535 aa11.64□□□□□ -0.55
KDM2A-201ENST00000308783 PPP6R2O75170 966 aa11.64□□□□□ -0.55
KDM2A-201ENST00000308783 CCDC15Q0P6D6 951 aa11.64□□□□□ -0.55
KDM2A-201ENST00000308783 CCDC93Q567U6 631 aa11.64□□□□□ -0.55
KDM2A-201ENST00000308783 RILPL1Q5EBL4 403 aa11.64□□□□□ -0.55
KDM2A-201ENST00000308783 EPC1Q9H2F5 836 aa11.64□□□□□ -0.55
KDM2A-201ENST00000308783 CAPN7Q9Y6W3 813 aa11.64□□□□□ -0.55
KDM2A-201ENST00000308783 JAG1P78504 1218 aa11.64□□□□□ -0.55
KDM2A-201ENST00000308783 RBM26Q5T8P6 1007 aaKnown RBP11.64□□□□□ -0.55
KDM2A-201ENST00000308783 ZNF280DQ6N043 979 aa11.64□□□□□ -0.55
KDM2A-201ENST00000308783 PDILTQ8N807 584 aa11.64□□□□□ -0.55
KDM2A-201ENST00000308783 SAAL1Q96ER3 474 aa11.64□□□□□ -0.55
KDM2A-201ENST00000308783 GPCPD1Q9NPB8 672 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms