RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 TMEM179Q6ZVK1 233 aa11.22□□□□□ -0.61
TTC1-201ENST00000231238 ZNF784Q8NCA9 323 aaPredicted RBP11.22□□□□□ -0.61
TTC1-201ENST00000231238 SYAP1Q96A49 352 aaPredicted RBP11.22□□□□□ -0.61
TTC1-201ENST00000231238 KIFC2Q96AC6 838 aa11.22□□□□□ -0.61
TTC1-201ENST00000231238 AIFM3Q96NN9 605 aa11.22□□□□□ -0.61
TTC1-201ENST00000231238 LMBRD1Q9NUN5 540 aa11.22□□□□□ -0.61
TTC1-201ENST00000231238 TFIP11Q9UBB9 837 aaKnown RBP11.22□□□□□ -0.61
TTC1-201ENST00000231238 SEC63Q9UGP8 760 aaKnown RBP11.22□□□□□ -0.61
TTC1-201ENST00000231238 DDX60LQ5H9U9 1706 aaKnown RBP11.22□□□□□ -0.61
TTC1-201ENST00000231238 ECM29Q5VYK3 1845 aa11.21□□□□□ -0.61
TTC1-201ENST00000231238 ATRNL1Q5VV63 1379 aa11.21□□□□□ -0.61
TTC1-201ENST00000231238 PLIN4Q96Q06 1357 aa11.21□□□□□ -0.61
TTC1-201ENST00000231238 ZNF541Q9H0D2 1346 aa11.21□□□□□ -0.61
TTC1-201ENST00000231238 hCG_1642624A0A1W2PR95 340 aa11.21□□□□□ -0.61
TTC1-201ENST00000231238 KLRF2D3W0D1 207 aa11.21□□□□□ -0.61
TTC1-201ENST00000231238 LILRA1O75019 489 aa11.21□□□□□ -0.61
TTC1-201ENST00000231238 GDF11O95390 407 aa11.21□□□□□ -0.61
TTC1-201ENST00000231238 ZNF280AP59817 542 aaPredicted RBP11.21□□□□□ -0.61
TTC1-201ENST00000231238 ICA1Q05084 483 aa11.21□□□□□ -0.61
TTC1-201ENST00000231238 SF3A1Q15459 793 aaKnown RBP11.21□□□□□ -0.61
TTC1-201ENST00000231238 GPR162Q16538 588 aa11.21□□□□□ -0.61
TTC1-201ENST00000231238 ATL3Q6DD88 541 aa11.21□□□□□ -0.61
TTC1-201ENST00000231238 FAM83AQ86UY5 434 aa11.21□□□□□ -0.61
TTC1-201ENST00000231238 RGS22Q8NE09 1264 aa11.21□□□□□ -0.61
TTC1-201ENST00000231238 KANSL2Q9H9L4 492 aa11.21□□□□□ -0.61
TTC1-201ENST00000231238 SHTN1A0MZ66 631 aa11.2□□□□□ -0.62
TTC1-201ENST00000231238 GOLGA8HP0CJ92 632 aa11.2□□□□□ -0.62
TTC1-201ENST00000231238 GUCY1A2P33402 732 aa11.2□□□□□ -0.62
TTC1-201ENST00000231238 NLRP5P59047 1200 aa11.2□□□□□ -0.62
TTC1-201ENST00000231238 UBE2HP62256 183 aa11.2□□□□□ -0.62
TTC1-201ENST00000231238 KIF23Q02241 960 aaPredicted RBP11.2□□□□□ -0.62
TTC1-201ENST00000231238 VAC14Q08AM6 782 aa11.2□□□□□ -0.62
TTC1-201ENST00000231238 KLHL40Q2TBA0 621 aa11.2□□□□□ -0.62
TTC1-201ENST00000231238 ASPRV1Q53RT3 343 aa11.2□□□□□ -0.62
TTC1-201ENST00000231238 C6orf118Q5T5N4 469 aa11.2□□□□□ -0.62
TTC1-201ENST00000231238 NBPF11Q86T75 865 aa11.2□□□□□ -0.62
TTC1-201ENST00000231238 GPC2Q8N158 579 aa11.2□□□□□ -0.62
TTC1-201ENST00000231238 LINC00528Q8N1L1 170 aa11.2□□□□□ -0.62
TTC1-201ENST00000231238 SRBD1Q8N5C6 995 aaKnown RBP11.2□□□□□ -0.62
TTC1-201ENST00000231238 RRP36Q96EU6 259 aaKnown RBP11.2□□□□□ -0.62
TTC1-201ENST00000231238 TMEM39BQ9GZU3 492 aa11.2□□□□□ -0.62
TTC1-201ENST00000231238 GJB4Q9NTQ9 266 aa11.2□□□□□ -0.62
TTC1-201ENST00000231238 KCNJ14Q9UNX9 436 aa11.2□□□□□ -0.62
TTC1-201ENST00000231238 ARFGEF1Q9Y6D6 1849 aa11.2□□□□□ -0.62
TTC1-201ENST00000231238 COL2A1P02458 1487 aaPredicted RBP11.2□□□□□ -0.62
TTC1-201ENST00000231238 FRMPD2Q68DX3 1309 aaPredicted RBP11.2□□□□□ -0.62
TTC1-201ENST00000231238 CNTNAP5Q8WYK1 1306 aa11.2□□□□□ -0.62
TTC1-201ENST00000231238 GH2P01242 217 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 SCG2P13521 617 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 MCCD1P59942 119 aaPredicted RBP11.19□□□□□ -0.62
TTC1-201ENST00000231238 IKQ13123 557 aaPredicted RBP11.19□□□□□ -0.62
TTC1-201ENST00000231238 RASA3Q14644 834 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 SEPT2Q15019 361 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 STK38Q15208 465 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 CAVIN1Q6NZI2 390 aaKnown RBP11.19□□□□□ -0.62
TTC1-201ENST00000231238 TATDN1Q6P1N9 297 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 USP17L2Q6R6M4 530 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 HOMER1Q86YM7 354 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 CLEC10AQ8IUN9 316 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 DIS3L2Q8IYB7 885 aaKnown RBP11.19□□□□□ -0.62
TTC1-201ENST00000231238 STAG2Q8N3U4 1231 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 HOOK2Q96ED9 719 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 DNAJC18Q9H819 358 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 ARHGEF10LQ9HCE6 1279 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 VAT1LQ9HCJ6 419 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 VPS54Q9P1Q0 977 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 MAD2L2Q9UI95 211 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 ZNF646O15015 1829 aaPredicted RBP11.19□□□□□ -0.62
TTC1-201ENST00000231238 USP17L5A8MUK1 530 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 MMP1P03956 469 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 SLURP2P0DP57 97 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 EEF2P13639 858 aaKnown RBP11.19□□□□□ -0.62
TTC1-201ENST00000231238 KRT2P35908 639 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 PRELPP51888 382 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 MIGA2Q7L4E1 593 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 HEATR3Q7Z4Q2 680 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 APOBEC3FQ8IUX4 373 aaKnown RBP11.19□□□□□ -0.62
TTC1-201ENST00000231238 TMEM87AQ8NBN3 555 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 CCDC148Q8NFR7 591 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 BICD2Q8TD16 824 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 CCDC12Q8WUD4 166 aaPredicted RBP11.19□□□□□ -0.62
TTC1-201ENST00000231238 NYAP2Q9P242 653 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 HACL1Q9UJ83 578 aa11.19□□□□□ -0.62
TTC1-201ENST00000231238 MYH8P13535 1937 aa11.18□□□□□ -0.62
TTC1-201ENST00000231238 IGKV6D-41A0A0C4DH26 115 aa11.18□□□□□ -0.62
TTC1-201ENST00000231238 PALM3A6NDB9 673 aaPredicted RBP11.18□□□□□ -0.62
TTC1-201ENST00000231238 UBE2Q2LH0YL09 131 aa11.18□□□□□ -0.62
TTC1-201ENST00000231238 PDHBP11177 359 aa11.18□□□□□ -0.62
TTC1-201ENST00000231238 CALML3P27482 149 aa11.18□□□□□ -0.62
TTC1-201ENST00000231238 SLC1A4P43007 532 aa11.18□□□□□ -0.62
TTC1-201ENST00000231238 ME1P48163 572 aa11.18□□□□□ -0.62
TTC1-201ENST00000231238 PFKFB3Q16875 520 aaPredicted RBP11.18□□□□□ -0.62
TTC1-201ENST00000231238 GPATCH4Q5T3I0 446 aaKnown RBP11.18□□□□□ -0.62
TTC1-201ENST00000231238 C9orf131Q5VYM1 1079 aa11.18□□□□□ -0.62
TTC1-201ENST00000231238 LEO1Q8WVC0 666 aaPredicted RBP11.18□□□□□ -0.62
TTC1-201ENST00000231238 ZBED3Q96IU2 234 aaPredicted RBP11.18□□□□□ -0.62
TTC1-201ENST00000231238 AGBL1Q96MI9 1066 aa11.18□□□□□ -0.62
TTC1-201ENST00000231238 GPRC5DQ9NZD1 345 aa11.18□□□□□ -0.62
TTC1-201ENST00000231238 CNTNAP1P78357 1384 aa11.17□□□□□ -0.62
TTC1-201ENST00000231238 BTBD18B2RXH4 712 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms