RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 H2-BlV9GXR0 257 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Mamdc4A2AJA7 1228 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Clcn6O35454 870 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 CalcaP70160 136 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Kcnk6Q3TBV4 313 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Calr4Q3TQS0 420 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Gm28047Q3US59 414 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Rrp12Q6P5B0 1295 aaKnown RBP10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 DaglaQ6WQJ1 1044 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Plekhm2Q80TQ5 1018 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Pum3Q8BKS9 647 aaKnown RBP10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 L3mbtl3Q8BLB7 883 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Bicd1Q8BR07 835 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Jakmip1Q8BVL9 626 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Ccdc169Q8BXX9 214 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Fgd2Q8BY35 655 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Atf7Q8R0S1 413 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 NotumQ8R116 503 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 HnrnpllQ921F4 591 aaKnown RBP10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Gimap3Q99MI6 301 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Cep89Q9CZX2 791 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Dnajb2Q9QYI5 324 aa10.17□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Plekha5E9Q6H8 1269 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Raph1F2Z3U3 1266 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Cavin1O54724 392 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 ByslO54825 436 aaKnown RBP10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Hdac3O88895 424 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Defb20Q30KP3 96 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Fscn2Q32M02 492 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Dcaf17Q3TUL7 519 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Pin1rt1Q3ULQ2 159 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Cwf19l2Q8BG79 887 aaKnown RBP10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Zmynd15Q8C0R7 736 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 HscbQ8K3A0 234 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 OscarQ8VBT3 265 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Tsnaxip1Q99P25 704 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Ecel1Q9JMI0 775 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Rock1P70335 1354 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 DnmbpQ6TXD4 1580 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Plxnc1Q9QZC2 1574 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Sema3aO08665 772 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Cbfa2t2O70374 594 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Kif2aP28740 705 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Nr2c2P49117 596 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Atxn1P54254 791 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Micall2Q3TN34 1009 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Ffar3Q3UFD7 319 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Tmtc1Q3UV71 942 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Rbl2Q64700 1135 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Atg16l2Q6KAU8 623 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Tmem127Q8BGP5 238 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 RalylQ8BTF8 293 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Dhx32Q8BZS9 744 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Rsad2Q8CBB9 362 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Lonp1Q8CGK3 949 aaKnown RBP10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Snx4Q91YJ2 450 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Q9CQC3 228 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Tbc1d15Q9CXF4 671 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Ndc80Q9D0F1 642 aaKnown RBP10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Kdelc1Q9JHP7 502 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Dkk3Q9QUN9 349 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 NagaQ9QWR8 415 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Sept6Q9R1T4 434 aa10.16□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Ttll13A4Q9F6 804 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 UprtB1AVZ0 310 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Dctn1O08788 1281 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Fosl1P48755 273 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 SgcgP82348 291 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Dab2P98078 766 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Prickle1Q3U5C7 832 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Ppp1r13bQ62415 1087 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Sh3gl1Q62419 368 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Pnma8aQ80VM8 430 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Cep85Q8BMK0 761 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Ifnl3Q8CGK6 193 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Nudcd3Q8R1N4 363 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Gorasp1Q91X51 446 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Tm4sf4Q91XD3 202 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Anapc16Q9CPV2 110 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Cts6Q9ET52 334 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Slc7a5Q9Z127 512 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Rims1Q99NE5 1463 aa10.15□□□□□ -0.78
Upf3b-201ENSMUST00000076265 Tox2A2A472 547 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Fbf1A2A870 1173 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Cyp4a12bA2A974 508 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 1700031F05RikB1AX30 191 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Hsbp1l1B2RXB2 72 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Cdkl5Q3UTQ8 938 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Zbtb2Q3V3W4 514 aaKnown RBP10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 VeztQ3ZK22 780 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Sdr16c5Q7TQA3 309 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Olfr798Q7TRH8 311 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Csrnp2Q8BGQ2 534 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Acot4Q8BWN8 421 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Alas1Q8VC19 642 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Mical1Q8VDP3 1048 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Ndufb9Q9CQJ8 179 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Zmat5Q9CQR5 170 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Krtap5-3Q9D226 196 aa10.15□□□□□ -0.79
Upf3b-201ENSMUST00000076265 Sart3Q9JLI8 962 aaKnown RBP10.15□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 113.5 ms