RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Kdm1aQ6ZQ88 853 aa18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 GlyctkQ8QZY2 523 aa18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 Q91WD4 421 aa18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 Osbpl1aQ91XL9 950 aa18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 Apopt1Q9CQW7 192 aa18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 Jag1Q9QXX0 1218 aa18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 IkQ9Z1M8 557 aaKnown RBP18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 Ep400Q8CHI8 3072 aaKnown RBP18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 Nedd4P46935 887 aaKnown RBP18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 Prpf38aQ4FK66 312 aaKnown RBP18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 Rbm12b2Q66JV4 834 aaKnown RBP18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 Cc2d1bQ8BRN9 848 aa18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 Sf3b3Q921M3 1217 aaKnown RBP18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 Akt1s1Q9D1F4 257 aa18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 CluhQ5SW19 1315 aa18.01■□□□□ 0.47
Trim28-201ENSMUST00000005705 Lrrc32G3XA59 663 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Ube3aO08759 870 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Men1O88559 611 aaKnown RBP18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Eya3P97480 510 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Lrrc43Q3V0L5 667 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Znf280dQ68FE8 974 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 E2f4Q8R0K9 410 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Galnt15Q9D2N8 638 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Zmym2Q9CU65 1376 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Gm10378F6XQQ1 160 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Zfp781Q0P5U5 243 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Csgalnact2Q8C1F4 542 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Spata16Q8C636 571 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Bcas3Q8CCN5 928 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Onecut3Q8K557 490 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Capn12Q9ER56 720 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Rps6ka4Q9Z2B9 773 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Ano3A2AHL1 981 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Zfp408H7BX78 710 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Sparcl1P70663 650 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Ccdc51Q3URS9 406 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Lrrc36Q3V0M2 755 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Meis1Q60954 390 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Rufy1Q8BIJ7 712 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Snrnp35Q9D384 244 aa18■□□□□ 0.47
Trim28-201ENSMUST00000005705 Myh4Q5SX39 1939 aa17.99■□□□□ 0.47
Trim28-201ENSMUST00000005705 Proca1B0QZF7 307 aa17.99■□□□□ 0.47
Trim28-201ENSMUST00000005705 Apol6B7ZC55 329 aa17.99■□□□□ 0.47
Trim28-201ENSMUST00000005705 Znf667Q2TL60 609 aa17.99■□□□□ 0.47
Trim28-201ENSMUST00000005705 Adcy2Q80TL1 1090 aa17.99■□□□□ 0.47
Trim28-201ENSMUST00000005705 AfdnQ9QZQ1 1820 aaKnown RBP17.99■□□□□ 0.47
Trim28-201ENSMUST00000005705 Dnm2P39054 870 aaKnown RBP17.99■□□□□ 0.47
Trim28-201ENSMUST00000005705 Llgl1Q80Y17 1036 aa17.99■□□□□ 0.47
Trim28-201ENSMUST00000005705 Arhgef6Q8K4I3 771 aa17.99■□□□□ 0.47
Trim28-201ENSMUST00000005705 Ribc1Q9D0B8 379 aa17.99■□□□□ 0.47
Trim28-201ENSMUST00000005705 Nfu1Q9QZ23 255 aa17.99■□□□□ 0.47
Trim28-201ENSMUST00000005705 Ppfia4B8QI36 1187 aa17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 Eps15P42567 897 aa17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 Chrna5Q2MKA5 467 aa17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 Hdac4Q6NZM9 1076 aa17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 Ildr1Q8CBR1 537 aa17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 Slc5a4bQ91ZP4 660 aa17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 MymkQ9D1N4 221 aa17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 Gtf2iQ9ESZ8 998 aaKnown RBP17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 Fdx1P46656 188 aa17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 Trim6Q8BGE7 488 aa17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 HibadhQ99L13 335 aaKnown RBP17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 Tbx18Q9EPZ6 613 aa17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 Ccnt1Q9QWV9 724 aaKnown RBP17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 Nhsl1Q8CAF4 1587 aa17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 Kndc1Q0KK55 1742 aa17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 Gm3893E9Q1I1 302 aa17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 EregQ61521 162 aa17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 Tlr11Q6R5P0 926 aa17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 Eps8l1Q8R5F8 716 aa17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 Rnf34Q99KR6 376 aa17.98■□□□□ 0.47
Trim28-201ENSMUST00000005705 Pabpc1lA2A5N3 607 aaKnown RBP17.97■□□□□ 0.47
Trim28-201ENSMUST00000005705 Shc3Q61120 474 aa17.97■□□□□ 0.47
Trim28-201ENSMUST00000005705 Ccna1Q61456 421 aa17.97■□□□□ 0.47
Trim28-201ENSMUST00000005705 NntQ61941 1086 aaKnown RBP17.97■□□□□ 0.47
Trim28-201ENSMUST00000005705 PnocQ64387 187 aa17.97■□□□□ 0.47
Trim28-201ENSMUST00000005705 Vcpip1Q8CDG3 1220 aa17.97■□□□□ 0.47
Trim28-201ENSMUST00000005705 EpgnQ924X1 152 aa17.97■□□□□ 0.47
Trim28-201ENSMUST00000005705 Map3k15A2AQW0 1331 aa17.97■□□□□ 0.47
Trim28-201ENSMUST00000005705 Tex13c2A0A0G2JGA3 530 aa17.97■□□□□ 0.47
Trim28-201ENSMUST00000005705 Gm7168A0AUV4 508 aa17.97■□□□□ 0.47
Trim28-201ENSMUST00000005705 Rpusd2Q149F1 553 aa17.97■□□□□ 0.47
Trim28-201ENSMUST00000005705 Map3k12Q60700 888 aa17.97■□□□□ 0.47
Trim28-201ENSMUST00000005705 Ddx3yQ62095 658 aaKnown RBP17.97■□□□□ 0.47
Trim28-201ENSMUST00000005705 Slc9b1Q8C0X2 565 aa17.97■□□□□ 0.47
Trim28-201ENSMUST00000005705 Parp10Q8CIE4 960 aa17.97■□□□□ 0.47
Trim28-201ENSMUST00000005705 Trmt112Q9DCG9 125 aa17.97■□□□□ 0.47
Trim28-201ENSMUST00000005705 Gdf11Q9Z1W4 405 aa17.97■□□□□ 0.47
Trim28-201ENSMUST00000005705 FAM186AQ9D9R9 1790 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Gna15P30678 374 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Stat3P42227 770 aaKnown RBP17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Il15P48346 162 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Tubb2aQ7TMM9 445 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Cct8l1Q80YT3 562 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Fermt3Q8K1B8 665 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Tmem134Q8R0J4 195 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Tubb2bQ9CWF2 445 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Mss51Q9D5Z5 446 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Myh15E9Q264 1925 aa17.96■□□□□ 0.47
Trim28-201ENSMUST00000005705 Zfp853A0A1D5RM95 733 aa17.96■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 43.7 ms