RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W RNP1P32385 249 aa3.68□□□□□ -1.82
SWI1YPL016W PRM9P39551 298 aa3.68□□□□□ -1.82
SWI1YPL016W SPF1P39986 1215 aaKnown RBP3.68□□□□□ -1.82
SWI1YPL016W RGI2P40188 164 aa3.68□□□□□ -1.82
SWI1YPL016W SEC28P40509 296 aaKnown RBP3.68□□□□□ -1.82
SWI1YPL016W EFM3P47163 339 aa3.68□□□□□ -1.82
SWI1YPL016W RSC9Q03124 581 aa3.68□□□□□ -1.82
SWI1YPL016W YDR222WQ04925 415 aa3.68□□□□□ -1.82
SWI1YPL016W PEX10Q05568 337 aa3.68□□□□□ -1.82
SWI1YPL016W EST2Q06163 884 aa3.68□□□□□ -1.82
SWI1YPL016W APC9Q12107 265 aa3.68□□□□□ -1.82
SWI1YPL016W RUP1Q12242 671 aa3.68□□□□□ -1.82
SWI1YPL016W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82 RIP-Chip
SWI1YPL016W ARG82P07250 355 aa3.67□□□□□ -1.82
SWI1YPL016W LHP1P33399 275 aaKnown RBP3.67□□□□□ -1.82
SWI1YPL016W YKR051WP36142 418 aa3.67□□□□□ -1.82
SWI1YPL016W ICE2P40499 491 aa3.67□□□□□ -1.82
SWI1YPL016W YJR056CP47115 236 aa3.67□□□□□ -1.82
SWI1YPL016W RRT6P53117 311 aaPredicted RBP3.67□□□□□ -1.82
SWI1YPL016W LIF1P53150 421 aa3.67□□□□□ -1.82
SWI1YPL016W BIO4P53630 237 aa3.67□□□□□ -1.82
SWI1YPL016W CBK1P53894 756 aa3.67□□□□□ -1.82
SWI1YPL016W FYV6P53913 173 aa3.67□□□□□ -1.82
SWI1YPL016W NAM8Q00539 523 aaKnown RBP3.67□□□□□ -1.82
SWI1YPL016W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
SWI1YPL016W CLU1Q03690 1277 aaKnown RBP3.67□□□□□ -1.82
SWI1YPL016W AIM41Q12032 185 aa3.67□□□□□ -1.82
SWI1YPL016W GRE2Q12068 342 aaKnown RBP3.67□□□□□ -1.82
SWI1YPL016W BSC1Q12140 328 aa3.67□□□□□ -1.82
SWI1YPL016W TMA7Q3E764 64 aaKnown RBP3.67□□□□□ -1.82
SWI1YPL016W GAL10P04397 699 aa3.67□□□□□ -1.82
SWI1YPL016W LEU4P06208 619 aaKnown RBP3.67□□□□□ -1.82
SWI1YPL016W KAR1P11927 433 aa3.67□□□□□ -1.82
SWI1YPL016W SPB1P25582 841 aaPredicted RBP3.67□□□□□ -1.82
SWI1YPL016W TRK2P28584 889 aa3.67□□□□□ -1.82
SWI1YPL016W SFP1P32432 683 aa3.67□□□□□ -1.82
SWI1YPL016W MRPL40P36534 297 aa3.67□□□□□ -1.82
SWI1YPL016W SLI15P38283 698 aa3.67□□□□□ -1.82
SWI1YPL016W PRE3P38624 215 aa3.67□□□□□ -1.82
SWI1YPL016W GND1P38720 489 aaKnown RBP3.67□□□□□ -1.82
SWI1YPL016W YER184CP39961 794 aa3.67□□□□□ -1.82
SWI1YPL016W YER010CP40011 234 aa3.67□□□□□ -1.82
SWI1YPL016W KRE29P40026 464 aa3.67□□□□□ -1.82
SWI1YPL016W MGS1P40151 587 aa3.67□□□□□ -1.82
SWI1YPL016W VHR1P40522 640 aa3.67□□□□□ -1.82
SWI1YPL016W GTT1P40582 234 aa3.67□□□□□ -1.82
SWI1YPL016W AGX1P43567 385 aa3.67□□□□□ -1.82
SWI1YPL016W PPT1P53043 513 aa3.67□□□□□ -1.82
SWI1YPL016W ROM1P53046 1155 aa3.67□□□□□ -1.82
SWI1YPL016W TMA20P89886 181 aaPredicted RBP3.67□□□□□ -1.82
SWI1YPL016W UTP5Q04177 643 aaKnown RBP3.67□□□□□ -1.82
SWI1YPL016W YDR109CQ04585 715 aa3.67□□□□□ -1.82
SWI1YPL016W PUF3Q07807 879 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
SWI1YPL016W ENT4Q07872 247 aa3.67□□□□□ -1.82
SWI1YPL016W HMS1Q12398 434 aa3.67□□□□□ -1.82
SWI1YPL016W ZRT2Q12436 422 aa3.67□□□□□ -1.82
SWI1YPL016W AGC1Q12482 902 aa3.67□□□□□ -1.82
SWI1YPL016W PHR1P05066 565 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
SWI1YPL016W DIT2P21595 489 aa3.67□□□□□ -1.82
SWI1YPL016W CPR3P25719 182 aa3.67□□□□□ -1.82
SWI1YPL016W FUN26P31381 517 aa3.67□□□□□ -1.82
SWI1YPL016W THI4P32318 326 aa3.67□□□□□ -1.82
SWI1YPL016W SUR1P33300 382 aa3.67□□□□□ -1.82
SWI1YPL016W MSG5P38590 489 aa3.67□□□□□ -1.82
SWI1YPL016W NEM1P38757 446 aa3.67□□□□□ -1.82
SWI1YPL016W END3P39013 349 aa3.67□□□□□ -1.82
SWI1YPL016W IRC5P43610 853 aa3.67□□□□□ -1.82
SWI1YPL016W HOC1P47124 396 aa3.67□□□□□ -1.82
SWI1YPL016W ABM1P47146 123 aa3.67□□□□□ -1.82
SWI1YPL016W MRI1Q06489 411 aaKnown RBP3.67□□□□□ -1.82
SWI1YPL016W BSP1Q06604 576 aa3.67□□□□□ -1.82
SWI1YPL016W TUB3P09734 445 aaKnown RBP3.66□□□□□ -1.82
SWI1YPL016W ATP11P32453 318 aa3.66□□□□□ -1.82
SWI1YPL016W VMA8P32610 256 aaKnown RBP3.66□□□□□ -1.82
SWI1YPL016W SSO1P32867 290 aa3.66□□□□□ -1.82
SWI1YPL016W RGI1P40043 161 aaPredicted RBP3.66□□□□□ -1.82
SWI1YPL016W PRK1P40494 810 aa3.66□□□□□ -1.82
SWI1YPL016W BNA1P47096 177 aa3.66□□□□□ -1.82
SWI1YPL016W RSM27P53305 110 aa3.66□□□□□ -1.82
SWI1YPL016W NOP19P53317 196 aaPredicted RBP3.66□□□□□ -1.82
SWI1YPL016W HOL1P53389 586 aa3.66□□□□□ -1.82
SWI1YPL016W HAS1Q03532 505 aaKnown RBP3.66□□□□□ -1.82
SWI1YPL016W HCR1Q05775 265 aaKnown RBP3.66□□□□□ -1.82
SWI1YPL016W YPS7Q06325 596 aa3.66□□□□□ -1.82
SWI1YPL016W PIB1Q06651 286 aa3.66□□□□□ -1.82
SWI1YPL016W FMP40Q08968 688 aaPredicted RBP3.66□□□□□ -1.82
SWI1YPL016W VPS54Q12071 889 aa3.66□□□□□ -1.82
SWI1YPL016W Q0142Q9ZZW4 58 aa3.66□□□□□ -1.82
SWI1YPL016W RPP1AP05318 106 aaPredicted RBP3.66□□□□□ -1.82
SWI1YPL016W PTC6P25646 442 aa3.66□□□□□ -1.82
SWI1YPL016W SRB4P32569 687 aa3.66□□□□□ -1.82
SWI1YPL016W MUD1P32605 298 aaKnown RBP3.66□□□□□ -1.82
SWI1YPL016W ANP1P32629 500 aa3.66□□□□□ -1.82
SWI1YPL016W TMT1P32643 299 aa3.66□□□□□ -1.82
SWI1YPL016W SIF2P38262 535 aa3.66□□□□□ -1.82
SWI1YPL016W MSS4P38994 779 aa3.66□□□□□ -1.82
SWI1YPL016W YEN1P40028 759 aa3.66□□□□□ -1.82
SWI1YPL016W VRG4P40107 337 aa3.66□□□□□ -1.82
SWI1YPL016W SPT20P50875 604 aa3.66□□□□□ -1.82
SWI1YPL016W MRH4P53166 561 aa3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 45.8 ms