RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCL1	YOL010W	YLR287C	Q05881	355 aa		4.65	□□□□□ -1.67
RCL1	YOL010W	MDM30	Q05930	598 aa		4.65	□□□□□ -1.67
RCL1	YOL010W	HBT1	Q07653	1046 aa	Known RBP	4.65	□□□□□ -1.67
RCL1	YOL010W	CMS1	Q07897	291 aa	Known RBP	4.65	□□□□□ -1.67
RCL1	YOL010W	ENB1	Q08299	606 aa		4.65	□□□□□ -1.67
RCL1	YOL010W	TMA16	Q08687	178 aa		4.65	□□□□□ -1.67
RCL1	YOL010W	CIR2	Q08822	631 aa		4.65	□□□□□ -1.67
RCL1	YOL010W	ACM1	Q08981	209 aa		4.65	□□□□□ -1.67
RCL1	YOL010W	NPC2	Q12408	173 aa		4.65	□□□□□ -1.67
RCL1	YOL010W	NOP58	Q12499	511 aa	Known RBP	4.65	□□□□□ -1.67
RCL1	YOL010W	YPT1	P01123	206 aa	Known RBP	4.64	□□□□□ -1.67
RCL1	YOL010W	RPL11A	P0C0W9	174 aa	Known RBP	4.64	□□□□□ -1.67
RCL1	YOL010W	KAR3	P17119	729 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	EPT1	P22140	391 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	NAM9	P27929	486 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	MSP1	P28737	362 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	SEC1	P30619	724 aa	Known RBP	4.64	□□□□□ -1.67
RCL1	YOL010W	JNM1	P36224	373 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	MRPL37	P36532	105 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	YHR033W	P38690	423 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	YHL041W	P38730	149 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	TDA3	P38758	523 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	CYC2	P38909	366 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	STN1	P38960	494 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	YEL028W	P39989	153 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	YAT2	P40017	923 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	SER3	P40054	469 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	AIM20	P40451	204 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	MPH1	P40562	993 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	RHO3	Q00245	231 aa	Known RBP	4.64	□□□□□ -1.67
RCL1	YOL010W	NUP116	Q02630	1113 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	ERV41	Q04651	352 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	RRN11	Q04712	507 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	GAD1	Q04792	585 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	YPR172W	Q06608	200 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	OPY2	Q06810	360 aa		4.64	□□□□□ -1.67
RCL1	YOL010W	RPL11B	Q3E757	174 aa	Predicted RBP	4.64	□□□□□ -1.67
RCL1	YOL010W	BI2	P03873	423 aa		4.63	□□□□□ -1.67
RCL1	YOL010W	YPK1	P12688	680 aa	Known RBP	4.63	□□□□□ -1.67
RCL1	YOL010W	ATE1	P16639	503 aa		4.63	□□□□□ -1.67
RCL1	YOL010W	GRR1	P24814	1151 aa		4.63	□□□□□ -1.67
RCL1	YOL010W	TSR4	P25040	408 aa		4.63	□□□□□ -1.67
RCL1	YOL010W	SBA1	P28707	216 aa	Known RBP	4.63	□□□□□ -1.67
RCL1	YOL010W	SEC65	P29478	273 aa		4.63	□□□□□ -1.67
RCL1	YOL010W	GDA1	P32621	518 aa		4.63	□□□□□ -1.67
RCL1	YOL010W	RRP14	P36080	434 aa	Known RBP	4.63	□□□□□ -1.67
RCL1	YOL010W	NTR2	P36118	322 aa	Predicted RBP	4.63	□□□□□ -1.67
RCL1	YOL010W	TRZ1	P36159	838 aa	Predicted RBP	4.63	□□□□□ -1.67
RCL1	YOL010W	MRPL15	P36523	253 aa		4.63	□□□□□ -1.67
RCL1	YOL010W	YFR020W	P43600	232 aa		4.63	□□□□□ -1.67
RCL1	YOL010W	RPC17	P47076	161 aa		4.63	□□□□□ -1.67
RCL1	YOL010W	VPS73	P53142	486 aa	Known RBP	4.63	□□□□□ -1.67
RCL1	YOL010W	ARX1	Q03862	593 aa	Known RBP	4.63	□□□□□ -1.67
RCL1	YOL010W	OMS1	Q06668	471 aa		4.63	□□□□□ -1.67
RCL1	YOL010W	SWC7	Q06707	132 aa		4.63	□□□□□ -1.67
RCL1	YOL010W	MRL1	Q06815	381 aa		4.63	□□□□□ -1.67
RCL1	YOL010W	THI21	Q08975	551 aa		4.63	□□□□□ -1.67
RCL1	YOL010W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
RCL1	YOL010W	BI3	Q9ZZW7	517 aa		4.63	□□□□□ -1.67
RCL1	YOL010W	COX5A	P00424	153 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	KAR1	P11927	433 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	PRE9	P23638	258 aa	Known RBP	4.62	□□□□□ -1.67
RCL1	YOL010W	GMH1	P36125	273 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	PSY4	P38193	441 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	SWC5	P38326	303 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	YBR259W	P38338	688 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	GIC1	P38785	314 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	RPH1	P39956	796 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	VFA1	P40080	203 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	YIL086C	P40503	102 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	YIL054W	P40524	105 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	MRPS18	P42847	217 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	GNP1	P48813	663 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	CIA1	Q05583	330 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	RAX1	Q08760	435 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	PGC1	Q08959	321 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	DIN7	Q12086	430 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	MCD1	Q12158	566 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	OCA6	Q12454	224 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	AI5_ALPHA	Q9ZZX1	630 aa		4.62	□□□□□ -1.67
RCL1	YOL010W	MDN1	Q12019	4910 aa	Known RBP	4.61	□□□□□ -1.67
RCL1	YOL010W	CDC24	P11433	854 aa	Predicted RBP	4.61	□□□□□ -1.67
RCL1	YOL010W	GFA1	P14742	717 aa	Known RBP	4.61	□□□□□ -1.67
RCL1	YOL010W	TUP1	P16649	713 aa		4.61	□□□□□ -1.67
RCL1	YOL010W	EST1	P17214	699 aa	Predicted RBP	4.61	□□□□□ -1.67
RCL1	YOL010W	CLC1	P17891	233 aa		4.61	□□□□□ -1.67
RCL1	YOL010W	TRX1	P22217	103 aa	Known RBP	4.61	□□□□□ -1.67
RCL1	YOL010W	RPL5	P26321	297 aa	Known RBP	4.61	□□□□□ -1.67
RCL1	YOL010W	HEM3	P28789	327 aa		4.61	□□□□□ -1.67
RCL1	YOL010W	SPS19	P32573	292 aa	Known RBP	4.61	□□□□□ -1.67
RCL1	YOL010W	LTV1	P34078	463 aa		4.61	□□□□□ -1.67
RCL1	YOL010W	MCM7	P38132	845 aa		4.61	□□□□□ -1.67
RCL1	YOL010W	YHR182W	P38870	785 aa		4.61	□□□□□ -1.67
RCL1	YOL010W	YMR124W	P39523	943 aa	Known RBP	4.61	□□□□□ -1.67
RCL1	YOL010W	YJL132W	P47014	750 aa		4.61	□□□□□ -1.67
RCL1	YOL010W	YGR012W	P53206	393 aa		4.61	□□□□□ -1.67
RCL1	YOL010W	YGR111W	P53265	400 aa		4.61	□□□□□ -1.67
RCL1	YOL010W	TIM13	P53299	105 aa		4.61	□□□□□ -1.67
RCL1	YOL010W	YNL247W	P53852	767 aa	Known RBP	4.61	□□□□□ -1.67
RCL1	YOL010W	JJJ1	P53863	590 aa		4.61	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 105.8 ms