RNA–Protein interactions for RNA: YNL311C

SKP2, Transcript of F-box protein of unknown function, yeast

Gene SKP2, Length 2,292 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP2	YNL311C	BCD1	P38772	366 aa		2.83	□□□□□ -1.96
SKP2	YNL311C	PRE6	P40303	254 aa	Known RBP	2.83	□□□□□ -1.96
SKP2	YNL311C	ATG3	P40344	310 aa		2.83	□□□□□ -1.96
SKP2	YNL311C	YIL152W	P40455	235 aa		2.83	□□□□□ -1.96
SKP2	YNL311C	RRT5	P43607	289 aa		2.83	□□□□□ -1.96
SKP2	YNL311C	BET4	Q00618	327 aa		2.83	□□□□□ -1.96
SKP2	YNL311C	UTP13	Q05946	817 aa	Known RBP	2.83	□□□□□ -1.96
SKP2	YNL311C	NUT2	Q06213	157 aa		2.83	□□□□□ -1.96
SKP2	YNL311C	CYK3	Q07533	885 aa		2.83	□□□□□ -1.96
SKP2	YNL311C	SPO75	Q07798	868 aa		2.83	□□□□□ -1.96
SKP2	YNL311C	MCM16	Q12262	181 aa		2.83	□□□□□ -1.96
SKP2	YNL311C	PAR32	Q12515	295 aa	Known RBP	2.83	□□□□□ -1.96
SKP2	YNL311C	SLY1	P22213	666 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	MCM5	P29496	775 aa	Known RBP	2.82	□□□□□ -1.96
SKP2	YNL311C	HIR2	P32480	875 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	UTR2	P32623	467 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	DEF1	P35732	738 aa	Known RBP	2.82	□□□□□ -1.96
SKP2	YNL311C	YBP1	P38315	674 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	OM14	P38325	134 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	MIP6	P38760	659 aa	Known RBP	2.82	□□□□□ -1.96
SKP2	YNL311C	VPS52	P39904	641 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	RGI2	P40188	164 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	TIM54	P47045	478 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	RFX1	P48743	811 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	FHN1	P53279	174 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	CDC55	Q00362	526 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	ECM9	Q02202	377 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	PML1	Q07930	204 aa	Predicted RBP	2.82	□□□□□ -1.96
SKP2	YNL311C	MRH1	Q12117	320 aa	Predicted RBP	2.82	□□□□□ -1.96
SKP2	YNL311C	GLO4	Q12320	285 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	PFK27	Q12471	397 aa	Predicted RBP	2.82	□□□□□ -1.96
SKP2	YNL311C	YLR111W	Q12528	110 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	FLO9	P39712	1322 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	SPS100	P13130	326 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	SGV1	P23293	657 aa	Known RBP	2.82	□□□□□ -1.96
SKP2	YNL311C	MEI5	P32489	222 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	IMP3	P32899	183 aa	Predicted RBP	2.82	□□□□□ -1.96
SKP2	YNL311C	RPS27A	P35997	82 aa	Known RBP	2.82	□□□□□ -1.96
SKP2	YNL311C	LDB7	P38210	180 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	REI1	P38344	393 aa	Predicted RBP	2.82	□□□□□ -1.96
SKP2	YNL311C	RPS27B	P38711	82 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	TDA11	P38854	504 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	SSN3	P39073	555 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	SAP4	P53036	818 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	REG1	Q00816	1014 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	ISR1	Q06098	443 aa	Known RBP	2.82	□□□□□ -1.96
SKP2	YNL311C	NOP6	Q07623	225 aa	Known RBP	2.82	□□□□□ -1.96
SKP2	YNL311C	YLR040C	Q07988	224 aa		2.82	□□□□□ -1.96
SKP2	YNL311C	HAP4	P14064	554 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	YCL049C	P25577	312 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	DCG1	P32460	244 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	AHP1	P38013	176 aa	Known RBP	2.81	□□□□□ -1.96
SKP2	YNL311C	APE4	P38821	490 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	BAP3	P41815	604 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	GCV1	P48015	400 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	COS12	P53053	380 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	SIW14	P53965	281 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	TIM10	P87108	93 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	CRR1	Q05790	422 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	GAS2	Q06135	555 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	YOR059C	Q08448	450 aa	Known RBP	2.81	□□□□□ -1.96
SKP2	YNL311C	YOR114W	Q12219	294 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	STE12	P13574	688 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	KAR3	P17119	729 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	CLB1	P24868	471 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	AGP1	P25376	633 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	TRZ1	P36159	838 aa	Predicted RBP	2.81	□□□□□ -1.96
SKP2	YNL311C	YBR071W	P38243	211 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	YSW1	P38280	609 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	PRP39	P39682	629 aa	Known RBP	2.81	□□□□□ -1.96
SKP2	YNL311C	FRT2	P39734	528 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	TPA1	P40032	644 aa	Known RBP	2.81	□□□□□ -1.96
SKP2	YNL311C	SLZ1	P40167	298 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	ATM1	P40416	690 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	ICE2	P40499	491 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	TES1	P41903	349 aa	Known RBP	2.81	□□□□□ -1.96
SKP2	YNL311C	GDS1	P41913	522 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	PFA3	P42836	336 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	MNN5	P46982	586 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	YLR001C	Q07895	862 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	GEP5	Q12393	293 aa		2.81	□□□□□ -1.96
SKP2	YNL311C	MRC1	P25588	1096 aa		2.8	□□□□□ -1.96
SKP2	YNL311C	TUL1	P36096	758 aa		2.8	□□□□□ -1.96
SKP2	YNL311C	MAK5	P38112	773 aa	Predicted RBP	2.8	□□□□□ -1.96
SKP2	YNL311C	OTU2	P38747	307 aa	Known RBP	2.8	□□□□□ -1.96
SKP2	YNL311C	YJL206C	P39529	758 aa		2.8	□□□□□ -1.96
SKP2	YNL311C	ECO1	P43605	281 aa		2.8	□□□□□ -1.96
SKP2	YNL311C	TIM13	P53299	105 aa		2.8	□□□□□ -1.96
SKP2	YNL311C	JJJ1	P53863	590 aa		2.8	□□□□□ -1.96
SKP2	YNL311C	CUZ1	P53899	274 aa		2.8	□□□□□ -1.96
SKP2	YNL311C	RLI1	Q03195	608 aa	Known RBP	2.8	□□□□□ -1.96
SKP2	YNL311C	MRX10	Q05648	414 aa		2.8	□□□□□ -1.96
SKP2	YNL311C	XYL2	Q07993	356 aa		2.8	□□□□□ -1.96
SKP2	YNL311C	CUE5	Q08412	411 aa	Known RBP	2.8	□□□□□ -1.96
SKP2	YNL311C	YLR149C	Q99296	730 aa		2.8	□□□□□ -1.96
SKP2	YNL311C	TPS2	P31688	896 aa	Known RBP	2.8	□□□□□ -1.96
SKP2	YNL311C	MGM101	P32787	269 aa	Known RBP	2.8	□□□□□ -1.96
SKP2	YNL311C	RAD5	P32849	1169 aa	Predicted RBP	2.8	□□□□□ -1.96
SKP2	YNL311C	PRX1	P34227	261 aa	Known RBP	2.8	□□□□□ -1.96
SKP2	YNL311C	YMR262W	P38430	313 aa		2.8	□□□□□ -1.96

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms