RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W RFS1P38234 210 aaKnown RBP1.53□□□□□ -2.16
LCD1YDR499W AXL2P38928 823 aa1.53□□□□□ -2.16
LCD1YDR499W SHO1P40073 367 aa1.53□□□□□ -2.16
LCD1YDR499W CSM2P40465 213 aa1.53□□□□□ -2.16
LCD1YDR499W VPS4P52917 437 aa1.53□□□□□ -2.16
LCD1YDR499W RHO4Q00246 291 aa1.53□□□□□ -2.16
LCD1YDR499W HEL2Q05580 639 aaKnown RBP1.53□□□□□ -2.16
LCD1YDR499W TEN1Q07921 160 aa1.53□□□□□ -2.16
LCD1YDR499W HNT3Q08702 217 aa1.53□□□□□ -2.16
LCD1YDR499W YER078W-AQ3E7A2 54 aa1.53□□□□□ -2.16
LCD1YDR499W DIA3P52290 468 aa1.52□□□□□ -2.17
LCD1YDR499W ERG26P53199 349 aaKnown RBP1.52□□□□□ -2.17
LCD1YDR499W SKG3Q06315 1026 aa1.52□□□□□ -2.17
LCD1YDR499W ENT4Q07872 247 aa1.52□□□□□ -2.17
LCD1YDR499W NKP1Q12493 238 aa1.52□□□□□ -2.17
LCD1YDR499W ATR1P13090 542 aa1.52□□□□□ -2.17
LCD1YDR499W NAM9P27929 486 aa1.52□□□□□ -2.17
LCD1YDR499W DEG1P31115 442 aaKnown RBP1.52□□□□□ -2.17
LCD1YDR499W SSH4P32343 579 aa1.52□□□□□ -2.17
LCD1YDR499W MRP20P32387 263 aa1.52□□□□□ -2.17
LCD1YDR499W HXT1P32465 570 aa1.52□□□□□ -2.17
LCD1YDR499W RRN3P36070 627 aa1.52□□□□□ -2.17
LCD1YDR499W ALY1P36117 915 aa1.52□□□□□ -2.17
LCD1YDR499W FMP10P40098 244 aa1.52□□□□□ -2.17
LCD1YDR499W ALG8P40351 577 aa1.52□□□□□ -2.17
LCD1YDR499W TIS11P47977 285 aa1.52□□□□□ -2.17
LCD1YDR499W BUD32P53323 261 aa1.52□□□□□ -2.17
LCD1YDR499W MSO1P53604 210 aaKnown RBP1.52□□□□□ -2.17
LCD1YDR499W SNO4Q04902 237 aa1.52□□□□□ -2.17
LCD1YDR499W SYO1Q07395 620 aa1.52□□□□□ -2.17
LCD1YDR499W HSP33Q08914 237 aaKnown RBP1.52□□□□□ -2.17
LCD1YDR499W HSP32Q08992 237 aa1.52□□□□□ -2.17
LCD1YDR499W LEU9Q12166 604 aaKnown RBP1.52□□□□□ -2.17
LCD1YDR499W YOL087CQ99247 1116 aa1.52□□□□□ -2.17
LCD1YDR499W AMD1P15274 810 aaKnown RBP1.51□□□□□ -2.17
LCD1YDR499W FRE1P32791 686 aa1.51□□□□□ -2.17
LCD1YDR499W MSN2P33748 704 aa1.51□□□□□ -2.17
LCD1YDR499W MTR2P34232 184 aaKnown RBP1.51□□□□□ -2.17
LCD1YDR499W SRO77P38163 1010 aa1.51□□□□□ -2.17
LCD1YDR499W NDT80P38830 627 aa1.51□□□□□ -2.17
LCD1YDR499W SCD6P45978 349 aaKnown RBP RIP-Chip data1.51□□□□□ -2.17 RIP-Chip
LCD1YDR499W MUB1Q03162 620 aa1.51□□□□□ -2.17
LCD1YDR499W RCO1Q04779 684 aa1.51□□□□□ -2.17
LCD1YDR499W RTT109Q07794 436 aa1.51□□□□□ -2.17
LCD1YDR499W PSR1Q07800 427 aa1.51□□□□□ -2.17
LCD1YDR499W YDL009CQ12210 107 aa1.51□□□□□ -2.17
LCD1YDR499W CPR1P14832 162 aaKnown RBP1.51□□□□□ -2.17
LCD1YDR499W PUT3P25502 979 aaPredicted RBP1.51□□□□□ -2.17
LCD1YDR499W SLZ1P40167 298 aa1.51□□□□□ -2.17
LCD1YDR499W SIP4P46954 829 aa1.51□□□□□ -2.17
LCD1YDR499W PIL1P53252 339 aaKnown RBP1.51□□□□□ -2.17
LCD1YDR499W CBK1P53894 756 aa1.51□□□□□ -2.17
LCD1YDR499W SHR3Q02774 210 aa1.51□□□□□ -2.17
LCD1YDR499W INA17Q02888 182 aa1.51□□□□□ -2.17
LCD1YDR499W SVL3Q03088 825 aaKnown RBP1.51□□□□□ -2.17
LCD1YDR499W SDH5Q08230 162 aa1.51□□□□□ -2.17
LCD1YDR499W NBP2Q12163 236 aa1.51□□□□□ -2.17
LCD1YDR499W PWP1P21304 576 aaKnown RBP1.5□□□□□ -2.17
LCD1YDR499W MCM10P32354 571 aa1.5□□□□□ -2.17
LCD1YDR499W YME1P32795 747 aa1.5□□□□□ -2.17
LCD1YDR499W DPH1P40487 425 aaKnown RBP1.5□□□□□ -2.17
LCD1YDR499W SNG1P46950 547 aa1.5□□□□□ -2.17
LCD1YDR499W SDT1P53078 280 aa1.5□□□□□ -2.17
LCD1YDR499W MEP3P53390 489 aa1.5□□□□□ -2.17
LCD1YDR499W YMR018WQ04364 514 aa1.5□□□□□ -2.17
LCD1YDR499W DPB4Q04603 196 aaKnown RBP1.5□□□□□ -2.17
LCD1YDR499W MRPL51Q06090 140 aaPredicted RBP1.5□□□□□ -2.17
LCD1YDR499W OPY2Q06810 360 aa1.5□□□□□ -2.17
LCD1YDR499W CTF3Q12748 733 aa1.5□□□□□ -2.17
LCD1YDR499W SOD1P00445 154 aaKnown RBP1.5□□□□□ -2.17
LCD1YDR499W FUM1P08417 488 aaKnown RBP1.5□□□□□ -2.17
LCD1YDR499W SPT15P13393 240 aaKnown RBP1.5□□□□□ -2.17
LCD1YDR499W YIM1P28625 365 aa1.5□□□□□ -2.17
LCD1YDR499W YBL059WP34224 193 aa1.5□□□□□ -2.17
LCD1YDR499W YKL100CP34248 587 aa1.5□□□□□ -2.17
LCD1YDR499W VID27P40157 782 aa1.5□□□□□ -2.17
LCD1YDR499W YIL067CP40514 678 aa1.5□□□□□ -2.17
LCD1YDR499W AAD10P47182 288 aa1.5□□□□□ -2.17
LCD1YDR499W BSC5P53755 489 aa1.5□□□□□ -2.17
LCD1YDR499W MHR1Q06630 226 aa1.5□□□□□ -2.17
LCD1YDR499W RRP12Q12754 1228 aaKnown RBP1.5□□□□□ -2.17
LCD1YDR499W PEP5P12868 1029 aa1.49□□□□□ -2.17
LCD1YDR499W VMA16P23968 213 aa1.49□□□□□ -2.17
LCD1YDR499W SGF29P25554 259 aa1.49□□□□□ -2.17
LCD1YDR499W PDB1P32473 366 aaKnown RBP1.49□□□□□ -2.17
LCD1YDR499W SWD3P38123 315 aa1.49□□□□□ -2.17
LCD1YDR499W HAT2P39984 401 aa1.49□□□□□ -2.17
LCD1YDR499W PTR3P43606 678 aa1.49□□□□□ -2.17
LCD1YDR499W ARC1P46672 376 aaKnown RBP1.49□□□□□ -2.17
LCD1YDR499W RIX7Q07844 837 aaKnown RBP1.49□□□□□ -2.17
LCD1YDR499W TOP1P04786 769 aa1.48□□□□□ -2.17
LCD1YDR499W RPL19AP0CX82 189 aaKnown RBP1.48□□□□□ -2.17
LCD1YDR499W RPL19BP0CX83 189 aaPredicted RBP1.48□□□□□ -2.17
LCD1YDR499W CDC24P11433 854 aaPredicted RBP1.48□□□□□ -2.17
LCD1YDR499W RNA14P25298 677 aaKnown RBP1.48□□□□□ -2.17
LCD1YDR499W YKL023WP36103 277 aaKnown RBP1.48□□□□□ -2.17
LCD1YDR499W YNG2P38806 282 aaKnown RBP1.48□□□□□ -2.17
LCD1YDR499W ALT2P52892 507 aa1.48□□□□□ -2.17
LCD1YDR499W DSD1P53095 428 aa1.48□□□□□ -2.17
LCD1YDR499W SLD5Q03406 294 aa1.48□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 83.7 ms