RNA–Protein interactions for RNA: YDR121W

DPB4, Transcript of Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex, yeast

Gene DPB4, Length 591 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DPB4	YDR121W	HIS1	P00498	297 aa	Known RBP	4.22	□□□□□ -1.73
DPB4	YDR121W	GAL4	P04386	881 aa		4.22	□□□□□ -1.73
DPB4	YDR121W	MET8	P15807	274 aa		4.22	□□□□□ -1.73
DPB4	YDR121W	ADY2	P25613	283 aa		4.22	□□□□□ -1.73
DPB4	YDR121W	KAR9	P32526	644 aa		4.22	□□□□□ -1.73
DPB4	YDR121W	LYS9	P38999	446 aa		4.22	□□□□□ -1.73
DPB4	YDR121W	PRM9	P39551	298 aa		4.22	□□□□□ -1.73
DPB4	YDR121W	SSP120	P39931	234 aa	Known RBP	4.22	□□□□□ -1.73
DPB4	YDR121W	SDP1	P40479	209 aa		4.22	□□□□□ -1.73
DPB4	YDR121W	PFA3	P42836	336 aa		4.22	□□□□□ -1.73
DPB4	YDR121W	NBP35	P52920	328 aa		4.22	□□□□□ -1.73
DPB4	YDR121W	YAP1802	P53309	568 aa		4.22	□□□□□ -1.73
DPB4	YDR121W	YML096W	Q04489	525 aa		4.22	□□□□□ -1.73
DPB4	YDR121W	YDR222W	Q04925	415 aa		4.22	□□□□□ -1.73
DPB4	YDR121W	YLR456W	Q06199	204 aa		4.22	□□□□□ -1.73
DPB4	YDR121W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
DPB4	YDR121W	DIN7	Q12086	430 aa		4.22	□□□□□ -1.73
DPB4	YDR121W	PEX11	Q12462	236 aa		4.22	□□□□□ -1.73
DPB4	YDR121W	URA3	P03962	267 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	MIS1	P09440	975 aa	Known RBP	4.21	□□□□□ -1.74
DPB4	YDR121W	HOM3	P10869	527 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	STE4	P18851	423 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	MRPL8	P22353	238 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	PET127	P32606	800 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	NUP120	P35729	1037 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	RKM3	P38222	552 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	SPT8	P38915	602 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	PZF1	P39933	429 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	YNL195C	P40168	261 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	PAN6	P40459	309 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	ASG1	P40467	964 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	ASN2	P49090	572 aa	Known RBP	4.21	□□□□□ -1.74
DPB4	YDR121W	RBG2	P53295	368 aa	Known RBP	4.21	□□□□□ -1.74
DPB4	YDR121W	MUS81	Q04149	632 aa	Predicted RBP	4.21	□□□□□ -1.74
DPB4	YDR121W	YKU80	Q04437	629 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	GSF2	Q04697	403 aa	Known RBP	4.21	□□□□□ -1.74
DPB4	YDR121W	SNO4	Q04902	237 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	YPR078C	Q06813	372 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	ATG10	Q07879	167 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	HSP33	Q08914	237 aa	Known RBP	4.21	□□□□□ -1.74
DPB4	YDR121W	HSP32	Q08992	237 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	SRO7	Q12038	1033 aa		4.21	□□□□□ -1.74
DPB4	YDR121W	SUC2	P00724	532 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	FRS1	P15624	595 aa	Known RBP	4.2	□□□□□ -1.74
DPB4	YDR121W	FUR1	P18562	216 aa	Known RBP	4.2	□□□□□ -1.74
DPB4	YDR121W	ALY1	P36117	915 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	RRP3	P38712	501 aa	Known RBP	4.2	□□□□□ -1.74
DPB4	YDR121W	YLF2	P38746	405 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	YER010C	P40011	234 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	RIC1	P40395	1056 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	YIL054W	P40524	105 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	MND2	P40577	368 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	BUD8	P41698	603 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	FET5	P43561	622 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	GLG2	P47011	380 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	TRF5	P48561	642 aa	Known RBP	4.2	□□□□□ -1.74
DPB4	YDR121W	PRP31	P49704	494 aa	Predicted RBP	4.2	□□□□□ -1.74
DPB4	YDR121W	TAF4	P50105	388 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	COX18	P53239	316 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	VAC7	P53950	1165 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	ORC3	P54790	616 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	ACS1	Q01574	713 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	INP2	Q03824	705 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	VPS36	Q06696	566 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	GRC3	Q07845	632 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	RPN8	Q08723	338 aa	Known RBP	4.2	□□□□□ -1.74
DPB4	YDR121W	HOS1	Q12214	470 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	HSH49	Q99181	213 aa	Predicted RBP	4.2	□□□□□ -1.74
DPB4	YDR121W	TRA1	P38811	3744 aa		4.2	□□□□□ -1.74
DPB4	YDR121W	SPT15	P13393	240 aa	Known RBP	4.19	□□□□□ -1.74
DPB4	YDR121W	DAL82	P21705	255 aa		4.19	□□□□□ -1.74
DPB4	YDR121W	ARG1	P22768	420 aa		4.19	□□□□□ -1.74
DPB4	YDR121W	CMK1	P27466	446 aa	Known RBP	4.19	□□□□□ -1.74
DPB4	YDR121W	HXT3	P32466	567 aa	Known RBP	4.19	□□□□□ -1.74
DPB4	YDR121W	DHR2	P36009	735 aa	Predicted RBP	4.19	□□□□□ -1.74
DPB4	YDR121W	YEL028W	P39989	153 aa		4.19	□□□□□ -1.74
DPB4	YDR121W	TMN3	P40071	706 aa		4.19	□□□□□ -1.74
DPB4	YDR121W	GID8	P40208	455 aa		4.19	□□□□□ -1.74
DPB4	YDR121W	RRT5	P43607	289 aa		4.19	□□□□□ -1.74
DPB4	YDR121W	YGR111W	P53265	400 aa		4.19	□□□□□ -1.74
DPB4	YDR121W	SSY1	Q03770	852 aa		4.19	□□□□□ -1.74
DPB4	YDR121W	SXM1	Q04175	944 aa	Known RBP	4.19	□□□□□ -1.74
DPB4	YDR121W	TDA9	Q04545	1251 aa		4.19	□□□□□ -1.74
DPB4	YDR121W	BNA5	Q05979	453 aa		4.19	□□□□□ -1.74
DPB4	YDR121W	KAP95	Q06142	861 aa	Known RBP	4.19	□□□□□ -1.74
DPB4	YDR121W	LSP1	Q12230	341 aa	Known RBP	4.19	□□□□□ -1.74
DPB4	YDR121W	SFI1	Q12369	946 aa		4.19	□□□□□ -1.74
DPB4	YDR121W	OCA6	Q12454	224 aa		4.19	□□□□□ -1.74
DPB4	YDR121W	AFI1	Q99222	893 aa		4.19	□□□□□ -1.74
DPB4	YDR121W	MEC1	P38111	2368 aa		4.19	□□□□□ -1.74
DPB4	YDR121W	SEM1	O94742	89 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	FUM1	P08417	488 aa	Known RBP	4.18	□□□□□ -1.74
DPB4	YDR121W	YPK1	P12688	680 aa	Known RBP	4.18	□□□□□ -1.74
DPB4	YDR121W	CLC1	P17891	233 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	PRP4	P20053	465 aa	Known RBP	4.18	□□□□□ -1.74
DPB4	YDR121W	AAT2	P23542	418 aa	Known RBP	4.18	□□□□□ -1.74
DPB4	YDR121W	MNE1	P24720	663 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	BRF1	P29056	596 aa		4.18	□□□□□ -1.74
DPB4	YDR121W	VMA8	P32610	256 aa	Known RBP	4.18	□□□□□ -1.74
DPB4	YDR121W	MTC7	P32633	139 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms