RNA–Protein interactions for RNA: YBR079C

RPG1, Transcript of eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene RPG1, Length 2,895 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPG1	YBR079C	ESL1	P40456	1118 aa		4.2	□□□□□ -1.74
RPG1	YBR079C	GCD10	P41814	478 aa		4.2	□□□□□ -1.74
RPG1	YBR079C	TES1	P41903	349 aa	Known RBP	4.2	□□□□□ -1.74
RPG1	YBR079C	ISM1	P48526	1002 aa		4.2	□□□□□ -1.74
RPG1	YBR079C	SLD3	P53135	668 aa		4.2	□□□□□ -1.74
RPG1	YBR079C	CLD1	P53264	445 aa		4.2	□□□□□ -1.74
RPG1	YBR079C	MTD1	Q02046	320 aa	Known RBP	4.2	□□□□□ -1.74
RPG1	YBR079C	TOF2	Q02208	771 aa		4.2	□□□□□ -1.74
RPG1	YBR079C	UGO1	Q03327	502 aa		4.2	□□□□□ -1.74
RPG1	YBR079C	PPN1	Q04119	674 aa		4.2	□□□□□ -1.74
RPG1	YBR079C	BLS1	Q06071	122 aa		4.2	□□□□□ -1.74
RPG1	YBR079C	PUS7	Q08647	676 aa	Known RBP	4.2	□□□□□ -1.74
RPG1	YBR079C	JLP1	Q12358	412 aa		4.2	□□□□□ -1.74
RPG1	YBR079C	RPN6	Q12377	434 aa		4.2	□□□□□ -1.74
RPG1	YBR079C	GAL80	P04387	435 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	RBK1	P25332	333 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	COX13	P32799	129 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	SDH3	P33421	198 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	TFA2	P36145	328 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	FKH2	P41813	862 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	NUP85	P46673	744 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	GCV2	P49095	1034 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	RCO1	Q04779	684 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	BCH1	Q05029	724 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	PUS5	Q06244	254 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	VTA1	Q06263	330 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	EMG1	Q06287	252 aa	Known RBP	4.19	□□□□□ -1.74
RPG1	YBR079C	YDL073W	Q07454	984 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	MNL2	Q12205	849 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	YLR126C	Q12288	251 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	SNF8	Q12483	233 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	MED11	Q99278	115 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	ECM29	P38737	1868 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	RAS2	P01120	322 aa	Known RBP	4.19	□□□□□ -1.74
RPG1	YBR079C	MRP13	P12686	339 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	ENA1	P13587	1091 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	VPS33	P20795	691 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	RPL24B	P24000	155 aa	Known RBP	4.19	□□□□□ -1.74
RPG1	YBR079C	CYS3	P31373	394 aa	Known RBP	4.19	□□□□□ -1.74
RPG1	YBR079C	ASH1	P34233	588 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	AHP1	P38013	176 aa	Known RBP	4.19	□□□□□ -1.74
RPG1	YBR079C	DLD3	P39976	496 aa	Known RBP	4.19	□□□□□ -1.74
RPG1	YBR079C	IES5	P40060	125 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	MEP2	P41948	499 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	TIS11	P47977	285 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	MSE1	P48525	536 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	DIE2	P50076	525 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	CWC23	P52868	283 aa	Predicted RBP	4.19	□□□□□ -1.74
RPG1	YBR079C	SNF12	P53628	566 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	BRE5	P53741	515 aa	Known RBP	4.19	□□□□□ -1.74
RPG1	YBR079C	ENA2	Q01896	1091 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	MET14	Q02196	202 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	SSQ1	Q05931	657 aa	Predicted RBP	4.19	□□□□□ -1.74
RPG1	YBR079C	YOL019W	Q08157	551 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
RPG1	YBR079C	GLE1	Q12315	538 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	ENA5	Q12691	1091 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	YOL159C-A	Q3E769	90 aa		4.19	□□□□□ -1.74
RPG1	YBR079C	PHO4	P07270	312 aa	Known RBP	4.18	□□□□□ -1.74
RPG1	YBR079C	PET122	P10355	254 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	TOP3	P13099	656 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	CRM1	P30822	1084 aa	Known RBP	4.18	□□□□□ -1.74
RPG1	YBR079C	HIR2	P32480	875 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	PRP21	P32524	280 aa	Predicted RBP	4.18	□□□□□ -1.74
RPG1	YBR079C	GPT2	P36148	743 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	YHL026C	P38740	315 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	SOL3	P38858	249 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	YHR202W	P38887	602 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	ACO2	P39533	789 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	RGI2	P40188	164 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	LAS21	P40367	830 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	YFL066C	P43538	392 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	CSN12	P47130	423 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	PSP1	P50896	841 aa	Known RBP	4.18	□□□□□ -1.74
RPG1	YBR079C	TWF1	P53250	332 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	RSC4	Q02206	625 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	RPN4	Q03465	531 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	YDR109C	Q04585	715 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	AIM32	Q04689	311 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	VAM6	Q07468	1049 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	PSR1	Q07800	427 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	ESC8	Q08119	714 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	ICT1	Q12385	394 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	RPS9A	O13516	197 aa	Known RBP	4.18	□□□□□ -1.74
RPG1	YBR079C	CBP2	P03874	630 aa	Predicted RBP	4.18	□□□□□ -1.74
RPG1	YBR079C	DCC1	P25559	380 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	FRE2	P36033	711 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	CAF4	P36130	643 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	MAK5	P38112	773 aa	Predicted RBP	4.18	□□□□□ -1.74
RPG1	YBR079C	GDH3	P39708	457 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	SPF1	P39986	1215 aa	Known RBP	4.18	□□□□□ -1.74
RPG1	YBR079C	COG3	P40094	801 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	PSF2	P40359	213 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	PML39	Q03760	334 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	MUS81	Q04149	632 aa	Predicted RBP	4.18	□□□□□ -1.74
RPG1	YBR079C	YMR111C	Q04461	462 aa	Predicted RBP	4.18	□□□□□ -1.74
RPG1	YBR079C	ARP10	Q04549	284 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	LDB18	Q07887	179 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	GSH2	Q08220	491 aa		4.18	□□□□□ -1.74
RPG1	YBR079C	UAF30	Q08747	228 aa		4.18	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 56.1 ms