RNA–Protein interactions for RNA: YAR002W

NUP60, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP60, Length 1,620 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP60YAR002W MRX6P48564 524 aa3.4□□□□□ -1.87
NUP60YAR002W ASN2P49090 572 aaKnown RBP3.4□□□□□ -1.87
NUP60YAR002W SPT20P50875 604 aa3.4□□□□□ -1.87
NUP60YAR002W CEG1Q01159 459 aaPredicted RBP3.4□□□□□ -1.87
NUP60YAR002W OSH6Q02201 448 aa3.4□□□□□ -1.87
NUP60YAR002W TRS31Q03337 283 aa3.4□□□□□ -1.87
NUP60YAR002W RSC3Q06639 885 aa3.4□□□□□ -1.87
NUP60YAR002W ENT4Q07872 247 aa3.4□□□□□ -1.87
NUP60YAR002W PEX15Q08215 383 aa3.4□□□□□ -1.87
NUP60YAR002W DIA2Q08496 732 aaPredicted RBP3.4□□□□□ -1.87
NUP60YAR002W YPR202WQ08993 238 aa3.4□□□□□ -1.87
NUP60YAR002W APC9Q12107 265 aa3.4□□□□□ -1.87
NUP60YAR002W CHS5Q12114 671 aaKnown RBP3.4□□□□□ -1.87
NUP60YAR002W LCB4Q12246 624 aa3.4□□□□□ -1.87
NUP60YAR002W OCA6Q12454 224 aa3.4□□□□□ -1.87
NUP60YAR002W CDC9P04819 755 aa3.39□□□□□ -1.87
NUP60YAR002W HSC82P15108 705 aaKnown RBP3.39□□□□□ -1.87
NUP60YAR002W PRP6P19735 899 aaPredicted RBP3.39□□□□□ -1.87
NUP60YAR002W EMC1P25574 760 aa3.39□□□□□ -1.87
NUP60YAR002W BUD14P27637 709 aa3.39□□□□□ -1.87
NUP60YAR002W DGR2P32330 852 aa3.39□□□□□ -1.87
NUP60YAR002W TFC3P34111 1160 aa3.39□□□□□ -1.87
NUP60YAR002W MTC2P34246 357 aa3.39□□□□□ -1.87
NUP60YAR002W MRP21P38175 177 aa3.39□□□□□ -1.87
NUP60YAR002W ECM13P38195 257 aa3.39□□□□□ -1.87
NUP60YAR002W YBR225WP38321 900 aa3.39□□□□□ -1.87
NUP60YAR002W URA8P38627 578 aaPredicted RBP3.39□□□□□ -1.87
NUP60YAR002W TRM5P38793 499 aa3.39□□□□□ -1.87
NUP60YAR002W SEC31P38968 1273 aaKnown RBP3.39□□□□□ -1.87
NUP60YAR002W MGS1P40151 587 aa3.39□□□□□ -1.87
NUP60YAR002W URM1P40554 99 aaPredicted RBP3.39□□□□□ -1.87
NUP60YAR002W YIL001WP40560 513 aa3.39□□□□□ -1.87
NUP60YAR002W OPT1P40897 799 aa3.39□□□□□ -1.87
NUP60YAR002W CHA4P43634 648 aa3.39□□□□□ -1.87
NUP60YAR002W DLD2P46681 530 aaKnown RBP3.39□□□□□ -1.87
NUP60YAR002W TAN1P53072 289 aaPredicted RBP3.39□□□□□ -1.87
NUP60YAR002W TIM13P53299 105 aa3.39□□□□□ -1.87
NUP60YAR002W CDC14Q00684 551 aa3.39□□□□□ -1.87
NUP60YAR002W YDR476CQ03362 224 aa3.39□□□□□ -1.87
NUP60YAR002W CSN9Q03981 162 aa3.39□□□□□ -1.87
NUP60YAR002W HPT1Q04178 221 aaKnown RBP3.39□□□□□ -1.87
NUP60YAR002W HFD1Q04458 532 aa3.39□□□□□ -1.87
NUP60YAR002W SSL1Q04673 461 aaPredicted RBP3.39□□□□□ -1.87
NUP60YAR002W NOP12Q08208 459 aaKnown RBP3.39□□□□□ -1.87
NUP60YAR002W SNX3Q08826 162 aaKnown RBP3.39□□□□□ -1.87
NUP60YAR002W PGC1Q08959 321 aa3.39□□□□□ -1.87
NUP60YAR002W YGR161W-CQ3E744 92 aa3.39□□□□□ -1.87
NUP60YAR002W RPL24AP04449 155 aaKnown RBP3.38□□□□□ -1.87
NUP60YAR002W MIS1P09440 975 aaKnown RBP3.38□□□□□ -1.87
NUP60YAR002W GCD2P12754 651 aaPredicted RBP3.38□□□□□ -1.87
NUP60YAR002W GLN4P13188 809 aaKnown RBP3.38□□□□□ -1.87
NUP60YAR002W ACO1P19414 778 aaKnown RBP RIP-Chip data3.38□□□□□ -1.87not detected
NUP60YAR002W CAD1P24813 409 aaKnown RBP3.38□□□□□ -1.87
NUP60YAR002W MEF1P25039 761 aa3.38□□□□□ -1.87
NUP60YAR002W GFD2P25370 566 aaKnown RBP3.38□□□□□ -1.87
NUP60YAR002W BEM1P29366 551 aa3.38□□□□□ -1.87
NUP60YAR002W RPD3P32561 433 aa3.38□□□□□ -1.87
NUP60YAR002W SWE1P32944 819 aa3.38□□□□□ -1.87
NUP60YAR002W GCS1P35197 352 aa3.38□□□□□ -1.87
NUP60YAR002W ASK1P35734 292 aa3.38□□□□□ -1.87
NUP60YAR002W HES1P35843 434 aa3.38□□□□□ -1.87
NUP60YAR002W YKR051WP36142 418 aa3.38□□□□□ -1.87
NUP60YAR002W BZZ1P38822 633 aa3.38□□□□□ -1.87
NUP60YAR002W SEO1P39709 593 aa3.38□□□□□ -1.87
NUP60YAR002W YJR061WP40355 935 aa3.38□□□□□ -1.87
NUP60YAR002W IRC24P40580 263 aa3.38□□□□□ -1.87
NUP60YAR002W CAF16P43569 289 aa3.38□□□□□ -1.87
NUP60YAR002W TY4A-JP47023 414 aa3.38□□□□□ -1.87
NUP60YAR002W NUP84P52891 726 aa3.38□□□□□ -1.87
NUP60YAR002W AIF1P52923 378 aa3.38□□□□□ -1.87
NUP60YAR002W COS6P53344 381 aa3.38□□□□□ -1.87
NUP60YAR002W CUS2P53830 285 aaPredicted RBP3.38□□□□□ -1.87
NUP60YAR002W NOP15P53927 220 aaPredicted RBP3.38□□□□□ -1.87
NUP60YAR002W PIR3Q03180 325 aa3.38□□□□□ -1.87
NUP60YAR002W HER2Q03557 464 aa3.38□□□□□ -1.87
NUP60YAR002W ACL4Q03771 387 aa3.38□□□□□ -1.87
NUP60YAR002W YMR155WQ03795 547 aa3.38□□□□□ -1.87
NUP60YAR002W YET2Q04210 160 aa3.38□□□□□ -1.87
NUP60YAR002W SEC10Q06245 871 aa3.38□□□□□ -1.87
NUP60YAR002W BCP1Q06338 283 aa3.38□□□□□ -1.87
NUP60YAR002W CAR1P00812 333 aaKnown RBP3.37□□□□□ -1.87
NUP60YAR002W MAS1P10507 462 aa3.37□□□□□ -1.87
NUP60YAR002W NMT1P14743 455 aa3.37□□□□□ -1.87
NUP60YAR002W CLN1P20437 546 aa3.37□□□□□ -1.87
NUP60YAR002W SEC15P22224 910 aa3.37□□□□□ -1.87
NUP60YAR002W VPS34P22543 875 aa3.37□□□□□ -1.87
NUP60YAR002W TRX2P22803 104 aaKnown RBP3.37□□□□□ -1.87
NUP60YAR002W AAT2P23542 418 aaKnown RBP3.37□□□□□ -1.87
NUP60YAR002W YCL002CP25565 263 aa3.37□□□□□ -1.87
NUP60YAR002W YCR090CP25654 182 aaKnown RBP3.37□□□□□ -1.87
NUP60YAR002W KAR9P32526 644 aa3.37□□□□□ -1.87
NUP60YAR002W RFS1P38234 210 aaKnown RBP3.37□□□□□ -1.87
NUP60YAR002W YHL041WP38730 149 aa3.37□□□□□ -1.87
NUP60YAR002W YHB1P39676 399 aaKnown RBP3.37□□□□□ -1.87
NUP60YAR002W MAM33P40513 266 aa3.37□□□□□ -1.87
NUP60YAR002W PRM2P40534 656 aa3.37□□□□□ -1.87
NUP60YAR002W IST3P40565 148 aaPredicted RBP3.37□□□□□ -1.87
NUP60YAR002W SHR5P41912 237 aa3.37□□□□□ -1.87
NUP60YAR002W YFL052WP43551 465 aa3.37□□□□□ -1.87
NUP60YAR002W STR3P53101 465 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 97.2 ms