RNA–Protein interactions for RNA: ENST00000637667.1

CLN6-222, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 874 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-222ENST00000637667 NEDD4P46934 1319 aa23.63■■□□□ 1.37
CLN6-222ENST00000637667 ZNF213O14771 459 aa23.63■■□□□ 1.37
CLN6-222ENST00000637667 GJA9P57773 515 aa23.63■■□□□ 1.37
CLN6-222ENST00000637667 IRX5P78411 483 aaPredicted RBP23.63■■□□□ 1.37
CLN6-222ENST00000637667 NSMFQ6X4W1 530 aa23.63■■□□□ 1.37
CLN6-222ENST00000637667 Q7L0L9 218 aa23.63■■□□□ 1.37
CLN6-222ENST00000637667 PCSK9Q8NBP7 692 aaKnown RBP23.63■■□□□ 1.37
CLN6-222ENST00000637667 ESR2Q92731 530 aa23.63■■□□□ 1.37
CLN6-222ENST00000637667 SUPT16HQ9Y5B9 1047 aaKnown RBP23.63■■□□□ 1.37
CLN6-222ENST00000637667 ASTN1O14525 1302 aa23.62■■□□□ 1.37
CLN6-222ENST00000637667 LTBP2Q14767 1821 aa23.62■■□□□ 1.37
CLN6-222ENST00000637667 ANKRD33Q7Z3H0 272 aa23.62■■□□□ 1.37
CLN6-222ENST00000637667 TOX2Q96NM4 488 aa23.62■■□□□ 1.37
CLN6-222ENST00000637667 KIAA0355O15063 1070 aa23.61■■□□□ 1.37
CLN6-222ENST00000637667 SNHG28P0DPA3 235 aa23.61■■□□□ 1.37
CLN6-222ENST00000637667 TNFAIP2Q03169 654 aa23.61■■□□□ 1.37
CLN6-222ENST00000637667 ZNF543Q08ER8 600 aa23.61■■□□□ 1.37
CLN6-222ENST00000637667 GNASQ5JWF2 1037 aa23.61■■□□□ 1.37
CLN6-222ENST00000637667 NOL8Q76FK4 1167 aaKnown RBP23.61■■□□□ 1.37
CLN6-222ENST00000637667 GLT1D1Q96MS3 346 aa23.61■■□□□ 1.37
CLN6-222ENST00000637667 DDX49Q9Y6V7 483 aaKnown RBP23.61■■□□□ 1.37
CLN6-222ENST00000637667 ELP1O95163 1332 aa23.6■■□□□ 1.37
CLN6-222ENST00000637667 DCDC2CA8MYV0 355 aa23.6■■□□□ 1.37
CLN6-222ENST00000637667 ASGR1P07306 291 aa23.6■■□□□ 1.37
CLN6-222ENST00000637667 ITGB8P26012 769 aa23.6■■□□□ 1.37
CLN6-222ENST00000637667 NT5C2P49902 561 aa23.6■■□□□ 1.37
CLN6-222ENST00000637667 NKX3-2P78367 333 aa23.6■■□□□ 1.37
CLN6-222ENST00000637667 SHHQ15465 462 aa23.6■■□□□ 1.37
CLN6-222ENST00000637667 C9orf50Q5SZB4 431 aa23.6■■□□□ 1.37
CLN6-222ENST00000637667 DSCC1Q9BVC3 393 aa23.6■■□□□ 1.37
CLN6-222ENST00000637667 TMEM39AQ9NV64 488 aa23.6■■□□□ 1.37
CLN6-222ENST00000637667 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.59■■□□□ 1.37
CLN6-222ENST00000637667 CTAGE5O15320 804 aa23.59■■□□□ 1.37
CLN6-222ENST00000637667 BAATQ14032 418 aaPredicted RBP23.59■■□□□ 1.37
CLN6-222ENST00000637667 DGKHQ86XP1 1220 aa23.59■■□□□ 1.37
CLN6-222ENST00000637667 PURBQ96QR8 312 aaKnown RBP23.59■■□□□ 1.37
CLN6-222ENST00000637667 ZKSCAN3Q9BRR0 538 aa23.59■■□□□ 1.37
CLN6-222ENST00000637667 MTMR10Q9NXD2 777 aa23.59■■□□□ 1.37
CLN6-222ENST00000637667 PNMA2Q9UL42 364 aa23.59■■□□□ 1.37
CLN6-222ENST00000637667 NFIBO00712 420 aa23.58■■□□□ 1.37
CLN6-222ENST00000637667 KDM4AO75164 1064 aa23.58■■□□□ 1.37
CLN6-222ENST00000637667 RAG1P15918 1043 aa23.58■■□□□ 1.37
CLN6-222ENST00000637667 FAAP100Q0VG06 881 aa23.58■■□□□ 1.37
CLN6-222ENST00000637667 CCDC178Q5BJE1 867 aa23.58■■□□□ 1.37
CLN6-222ENST00000637667 IQCA1Q86XH1 822 aa23.58■■□□□ 1.37
CLN6-222ENST00000637667 FBXO16Q8IX29 292 aaPredicted RBP23.58■■□□□ 1.37
CLN6-222ENST00000637667 VTI1AQ96AJ9 217 aa23.58■■□□□ 1.37
CLN6-222ENST00000637667 GNEQ9Y223 722 aaKnown RBP23.58■■□□□ 1.37
CLN6-222ENST00000637667 BEX3Q00994 111 aa23.57■■□□□ 1.36
CLN6-222ENST00000637667 GPATCH4Q5T3I0 446 aaKnown RBP23.57■■□□□ 1.36
CLN6-222ENST00000637667 EEPD1Q7L9B9 569 aa23.57■■□□□ 1.36
CLN6-222ENST00000637667 TLK2Q86UE8 772 aa23.57■■□□□ 1.36
CLN6-222ENST00000637667 MORC4Q8TE76 937 aa23.57■■□□□ 1.36
CLN6-222ENST00000637667 VTA1Q9NP79 307 aa23.57■■□□□ 1.36
CLN6-222ENST00000637667 PDGFCQ9NRA1 345 aa23.57■■□□□ 1.36
CLN6-222ENST00000637667 ADD3Q9UEY8 706 aaKnown RBP23.57■■□□□ 1.36
CLN6-222ENST00000637667 CTNNA3Q9UI47 895 aa23.57■■□□□ 1.36
CLN6-222ENST00000637667 MROH7Q68CQ1 1323 aa23.57■■□□□ 1.36
CLN6-222ENST00000637667 WDR19Q8NEZ3 1342 aa23.57■■□□□ 1.36
CLN6-222ENST00000637667 A0A0U1RQG5 324 aaPredicted RBP23.56■■□□□ 1.36
CLN6-222ENST00000637667 B4E1Z4 1266 aa23.56■■□□□ 1.36
CLN6-222ENST00000637667 SMPD1P17405 629 aa23.56■■□□□ 1.36
CLN6-222ENST00000637667 PDE4AP27815 886 aa23.56■■□□□ 1.36
CLN6-222ENST00000637667 CDK7P50613 346 aa23.56■■□□□ 1.36
CLN6-222ENST00000637667 IMMTQ16891 758 aaKnown RBP23.56■■□□□ 1.36
CLN6-222ENST00000637667 IQSEC1Q6DN90 963 aa23.56■■□□□ 1.36
CLN6-222ENST00000637667 FAM109BQ6ICB4 259 aaPredicted RBP23.56■■□□□ 1.36
CLN6-222ENST00000637667 TAPT1Q6NXT6 567 aa23.56■■□□□ 1.36
CLN6-222ENST00000637667 CLEC4DQ8WXI8 215 aa23.56■■□□□ 1.36
CLN6-222ENST00000637667 AP5M1Q9H0R1 490 aa23.56■■□□□ 1.36
CLN6-222ENST00000637667 PTPDC1A2A3K4 754 aa23.55■■□□□ 1.36
CLN6-222ENST00000637667 ARVCFO00192 962 aa23.55■■□□□ 1.36
CLN6-222ENST00000637667 DLL1O00548 723 aa23.55■■□□□ 1.36
CLN6-222ENST00000637667 GOLGA8HP0CJ92 632 aa23.55■■□□□ 1.36
CLN6-222ENST00000637667 ALDH5A1P51649 535 aaPredicted RBP23.55■■□□□ 1.36
CLN6-222ENST00000637667 PNMA1Q8ND90 353 aa23.55■■□□□ 1.36
CLN6-222ENST00000637667 ANKS1AQ92625 1134 aa23.55■■□□□ 1.36
CLN6-222ENST00000637667 TBX21Q9UL17 535 aa23.55■■□□□ 1.36
CLN6-222ENST00000637667 LOC102724159A0A0B4J2E5 919 aa23.54■■□□□ 1.36
CLN6-222ENST00000637667 DYNC1LI2O43237 492 aaPredicted RBP23.54■■□□□ 1.36
CLN6-222ENST00000637667 PTGS1P23219 599 aa23.54■■□□□ 1.36
CLN6-222ENST00000637667 EPHB4P54760 987 aa23.54■■□□□ 1.36
CLN6-222ENST00000637667 PWP2Q15269 919 aaKnown RBP23.54■■□□□ 1.36
CLN6-222ENST00000637667 FSCN1Q16658 493 aaKnown RBP23.54■■□□□ 1.36
CLN6-222ENST00000637667 TTC22Q5TAA0 569 aa23.54■■□□□ 1.36
CLN6-222ENST00000637667 SLC30A10Q6XR72 485 aa23.54■■□□□ 1.36
CLN6-222ENST00000637667 SLC17A8Q8NDX2 589 aa23.54■■□□□ 1.36
CLN6-222ENST00000637667 ZSCAN10Q96SZ4 725 aaPredicted RBP23.54■■□□□ 1.36
CLN6-222ENST00000637667 IL25Q9H293 177 aa23.54■■□□□ 1.36
CLN6-222ENST00000637667 KAT14Q9H8E8 782 aa23.54■■□□□ 1.36
CLN6-222ENST00000637667 ZSWIM5Q9P217 1185 aa23.54■■□□□ 1.36
CLN6-222ENST00000637667 LAMA2P24043 3122 aaKnown RBP23.54■■□□□ 1.36
CLN6-222ENST00000637667 GSPT1P15170 499 aaKnown RBP23.53■■□□□ 1.36
CLN6-222ENST00000637667 CALML3P27482 149 aa23.53■■□□□ 1.36
CLN6-222ENST00000637667 FPGSQ05932 587 aa23.53■■□□□ 1.36
CLN6-222ENST00000637667 CXCL17Q6UXB2 119 aa23.53■■□□□ 1.36
CLN6-222ENST00000637667 RNF207Q6ZRF8 634 aa23.53■■□□□ 1.36
CLN6-222ENST00000637667 KIAA1211Q6ZU35 1233 aa23.53■■□□□ 1.36
CLN6-222ENST00000637667 ENAHQ8N8S7 591 aaPredicted RBP23.53■■□□□ 1.36
CLN6-222ENST00000637667 KRT23Q9C075 422 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms