RNA–Protein interactions for RNA: ENST00000616983.4

GYPA-212, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene GYPA, Length 2,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-212ENST00000616983 TRAK1Q9UPV9 953 aa6.74□□□□□ -1.33
GYPA-212ENST00000616983 TNPO3Q9Y5L0 923 aaKnown RBP6.74□□□□□ -1.33
GYPA-212ENST00000616983 CCDC159P0C7I6 412 aa6.74□□□□□ -1.33
GYPA-212ENST00000616983 HPDP32754 393 aaPredicted RBP6.74□□□□□ -1.33
GYPA-212ENST00000616983 STAT1P42224 750 aa6.74□□□□□ -1.33
GYPA-212ENST00000616983 FCGRTP55899 365 aa6.74□□□□□ -1.33
GYPA-212ENST00000616983 KRT85P78386 507 aa6.74□□□□□ -1.33
GYPA-212ENST00000616983 MAP2K1Q02750 393 aaPredicted RBP6.74□□□□□ -1.33
GYPA-212ENST00000616983 ZNF460Q14592 562 aa6.74□□□□□ -1.33
GYPA-212ENST00000616983 C6orf118Q5T5N4 469 aa6.74□□□□□ -1.33
GYPA-212ENST00000616983 PDZD4Q76G19 769 aaPredicted RBP6.74□□□□□ -1.33
GYPA-212ENST00000616983 TEX11Q8IYF3 940 aa6.74□□□□□ -1.33
GYPA-212ENST00000616983 COLGALT2Q8IYK4 626 aa6.74□□□□□ -1.33
GYPA-212ENST00000616983 ASB2Q96Q27 587 aa6.74□□□□□ -1.33
GYPA-212ENST00000616983 OSBPL3Q9H4L5 887 aa6.74□□□□□ -1.33
GYPA-212ENST00000616983 CYP4F11Q9HBI6 524 aa6.74□□□□□ -1.33
GYPA-212ENST00000616983 ARHGEF4Q9NR80 690 aa6.74□□□□□ -1.33
GYPA-212ENST00000616983 PCDHB3Q9Y5E6 796 aa6.74□□□□□ -1.33
GYPA-212ENST00000616983 BICRAQ9NZM4 1560 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 IL33O95760 270 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 SMARCA1P28370 1054 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 MRE11P49959 708 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 HSD17B7P56937 341 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 ERVK-9P63128 1117 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 UBXN2AP68543 259 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 ZNF252P-AS1Q0IIN9 211 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 KIAA2012Q0VF49 1180 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 HSP90AA2PQ14568 343 aaPredicted RBP6.73□□□□□ -1.33
GYPA-212ENST00000616983 SH3PXD2AQ5TCZ1 1133 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 LRRC69Q6ZNQ3 347 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 CEP57L1Q8IYX8 460 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 MSANTD4Q8NCY6 345 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 TBCBQ99426 244 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 SMOC1Q9H4F8 434 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 M0R2C6 588 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 ACTN4O43707 911 aaKnown RBP6.73□□□□□ -1.33
GYPA-212ENST00000616983 PQBP1O60828 265 aaKnown RBP6.73□□□□□ -1.33
GYPA-212ENST00000616983 DKC1O60832 514 aaKnown RBP eCLIP6.73□□□□□ -1.33
GYPA-212ENST00000616983 LSM11P83369 360 aaKnown RBP eCLIP6.73□□□□□ -1.33
GYPA-212ENST00000616983 KCNC4Q03721 635 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 ARSIQ5FYB1 569 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 YOD1Q5VVQ6 348 aaPredicted RBP6.73□□□□□ -1.33
GYPA-212ENST00000616983 IQSEC1Q6DN90 963 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 ENOSF1Q7L5Y1 443 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 SDCCAG8Q86SQ7 713 aaPredicted RBP6.73□□□□□ -1.33
GYPA-212ENST00000616983 SCUBE1Q8IWY4 988 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 CARNMT1Q8N4J0 409 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 DIAPH3Q9NSV4 1193 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 CCDC39Q9UFE4 941 aa6.73□□□□□ -1.33
GYPA-212ENST00000616983 HERC5Q9UII4 1024 aaKnown RBP6.73□□□□□ -1.33
GYPA-212ENST00000616983 H3BRJ5 948 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 PPEF1O14829 653 aaPredicted RBP6.72□□□□□ -1.33
GYPA-212ENST00000616983 TMEM127O75204 238 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 ZPR1O75312 459 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 ECEL1O95672 775 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 DNTTP04053 509 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 SMTNP53814 917 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 TMF1P82094 1093 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 DGKKQ5KSL6 1271 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 TTBK2Q6IQ55 1244 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 PDE12Q6L8Q7 609 aaKnown RBP6.72□□□□□ -1.33
GYPA-212ENST00000616983 SYDE1Q6ZW31 735 aaPredicted RBP6.72□□□□□ -1.33
GYPA-212ENST00000616983 REC114Q7Z4M0 266 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 ZNF438Q7Z4V0 828 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 MAP4K3Q8IVH8 894 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 OR2W6PQ8NHA6 318 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 FAXDC2Q96IV6 333 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 IPO9Q96P70 1041 aaKnown RBP6.72□□□□□ -1.33
GYPA-212ENST00000616983 OXCT2Q9BYC2 517 aaPredicted RBP6.72□□□□□ -1.33
GYPA-212ENST00000616983 EHMT1Q9H9B1 1298 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 KIAA1468Q9P260 1216 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 IFT80Q9P2H3 777 aaPredicted RBP6.72□□□□□ -1.33
GYPA-212ENST00000616983 USP3Q9Y6I4 520 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 ATP6V1B1P15313 513 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 RPS26P62854 115 aaKnown RBP6.72□□□□□ -1.33
GYPA-212ENST00000616983 KLF1Q13351 362 aaPredicted RBP6.72□□□□□ -1.33
GYPA-212ENST00000616983 PPP2R5DQ14738 602 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 SLMAPQ14BN4 828 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 SLC14A2Q15849 920 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 HSP90B2PQ58FF3 399 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 CCDC30Q5VVM6 783 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 PCYOX1LQ8NBM8 494 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 C1orf162Q8NEQ5 155 aaPredicted RBP6.72□□□□□ -1.33
GYPA-212ENST00000616983 SSH3Q8TE77 659 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 FERMT2Q96AC1 680 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 KATNAL1Q9BW62 490 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 NSMCE4AQ9NXX6 385 aa6.72□□□□□ -1.33
GYPA-212ENST00000616983 RTCAO00442 366 aaKnown RBP6.71□□□□□ -1.34
GYPA-212ENST00000616983 IPO8O15397 1037 aaKnown RBP6.71□□□□□ -1.34
GYPA-212ENST00000616983 ASLP04424 464 aa6.71□□□□□ -1.34
GYPA-212ENST00000616983 NUDT7P0C024 238 aa6.71□□□□□ -1.34
GYPA-212ENST00000616983 POLR2BP30876 1174 aaKnown RBP6.71□□□□□ -1.34
GYPA-212ENST00000616983 KRT9P35527 623 aa6.71□□□□□ -1.34
GYPA-212ENST00000616983 PPM1AP35813 382 aa6.71□□□□□ -1.34
GYPA-212ENST00000616983 TRPC1P48995 793 aa6.71□□□□□ -1.34
GYPA-212ENST00000616983 ATXN1P54253 815 aaKnown RBP6.71□□□□□ -1.34
GYPA-212ENST00000616983 TMED1Q13445 227 aa6.71□□□□□ -1.34
GYPA-212ENST00000616983 IFIT1BQ5T764 474 aaKnown RBP6.71□□□□□ -1.34
GYPA-212ENST00000616983 C16orf87Q6PH81 154 aa6.71□□□□□ -1.34
GYPA-212ENST00000616983 VHLLQ6RSH7 139 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms