RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 ZBTB5O15062 677 aa31.62■■■□□ 2.65
CSPG5-205ENST00000610462 PAK1Q13153 545 aa31.62■■■□□ 2.65
CSPG5-205ENST00000610462 SEMA3FQ13275 785 aa31.62■■■□□ 2.65
CSPG5-205ENST00000610462 KCNB1Q14721 858 aa31.62■■■□□ 2.65
CSPG5-205ENST00000610462 TRIM34Q9BYJ4 488 aa31.62■■■□□ 2.65
CSPG5-205ENST00000610462 SLC16A2P36021 539 aa31.61■■■□□ 2.65
CSPG5-205ENST00000610462 POTEDQ86YR6 584 aa31.61■■■□□ 2.65
CSPG5-205ENST00000610462 USP17L10C9JJH3 530 aa31.61■■■□□ 2.65
CSPG5-205ENST00000610462 EEF2P13639 858 aaKnown RBP31.61■■■□□ 2.65
CSPG5-205ENST00000610462 MTMR9Q96QG7 549 aa31.61■■■□□ 2.65
CSPG5-205ENST00000610462 PLIN2Q99541 437 aa31.61■■■□□ 2.65
CSPG5-205ENST00000610462 PLCG1P19174 1290 aa31.6■■■□□ 2.65
CSPG5-205ENST00000610462 TECP42680 631 aa31.6■■■□□ 2.65
CSPG5-205ENST00000610462 IGSF22Q8N9C0 903 aa31.6■■■□□ 2.65
CSPG5-205ENST00000610462 DCAF4Q8WV16 495 aa31.6■■■□□ 2.65
CSPG5-205ENST00000610462 ADD3Q9UEY8 706 aaKnown RBP31.6■■■□□ 2.65
CSPG5-205ENST00000610462 ARFGEF1Q9Y6D6 1849 aa31.6■■■□□ 2.65
CSPG5-205ENST00000610462 KIF2AO00139 706 aaPredicted RBP31.6■■■□□ 2.65
CSPG5-205ENST00000610462 PPIP5K2O43314 1243 aa31.6■■■□□ 2.65
CSPG5-205ENST00000610462 CLK2P49760 499 aaKnown RBP31.6■■■□□ 2.65
CSPG5-205ENST00000610462 LRRC15Q8TF66 581 aa31.6■■■□□ 2.65
CSPG5-205ENST00000610462 NELFBQ8WX92 580 aa31.6■■■□□ 2.65
CSPG5-205ENST00000610462 PPP1R13BQ96KQ4 1090 aa31.6■■■□□ 2.65
CSPG5-205ENST00000610462 GDAQ9Y2T3 454 aa31.6■■■□□ 2.65
CSPG5-205ENST00000610462 EDIL3O43854 480 aa31.59■■■□□ 2.65
CSPG5-205ENST00000610462 KLRC4O43908 158 aa31.59■■■□□ 2.65
CSPG5-205ENST00000610462 ENTPD3O75355 529 aa31.59■■■□□ 2.65
CSPG5-205ENST00000610462 GOLGA8FQ08AF8 430 aa31.59■■■□□ 2.65
CSPG5-205ENST00000610462 GOLGA8DPQ0D2H9 430 aa31.59■■■□□ 2.65
CSPG5-205ENST00000610462 CUL5Q93034 780 aa31.59■■■□□ 2.65
CSPG5-205ENST00000610462 TDRD3Q9H7E2 651 aaKnown RBP31.59■■■□□ 2.65
CSPG5-205ENST00000610462 YDJCA8MPS7 323 aa31.58■■■□□ 2.65
CSPG5-205ENST00000610462 CALCRLQ16602 461 aa31.58■■■□□ 2.65
CSPG5-205ENST00000610462 SHROOM1Q2M3G4 852 aaPredicted RBP31.58■■■□□ 2.65
CSPG5-205ENST00000610462 KMT5BQ4FZB7 885 aa31.58■■■□□ 2.65
CSPG5-205ENST00000610462 ATRNL1Q5VV63 1379 aa31.58■■■□□ 2.65
CSPG5-205ENST00000610462 CCP110O43303 1012 aa31.58■■■□□ 2.65
CSPG5-205ENST00000610462 PRCPP42785 496 aa31.58■■■□□ 2.65
CSPG5-205ENST00000610462 MRPL12P52815 198 aaKnown RBP31.58■■■□□ 2.65
CSPG5-205ENST00000610462 FILIP1LQ4L180 1135 aa31.58■■■□□ 2.65
CSPG5-205ENST00000610462 TMEM179Q6ZVK1 233 aa31.58■■■□□ 2.65
CSPG5-205ENST00000610462 TMEM139Q8IV31 216 aa31.58■■■□□ 2.65
CSPG5-205ENST00000610462 TEX33O43247 280 aa31.57■■■□□ 2.64
CSPG5-205ENST00000610462 C21orf2O43822 256 aa31.57■■■□□ 2.64
CSPG5-205ENST00000610462 SLFN13Q68D06 897 aa31.57■■■□□ 2.64
CSPG5-205ENST00000610462 TC2NQ8N9U0 490 aa31.57■■■□□ 2.64
CSPG5-205ENST00000610462 COL2A1P02458 1487 aaPredicted RBP31.57■■■□□ 2.64
CSPG5-205ENST00000610462 RHOBTB3O94955 611 aa31.56■■■□□ 2.64
CSPG5-205ENST00000610462 TXKP42681 527 aa31.56■■■□□ 2.64
CSPG5-205ENST00000610462 FXR2P51116 673 aaKnown RBP eCLIP31.56■■■□□ 2.64
CSPG5-205ENST00000610462 RBM10P98175 930 aaKnown RBP31.56■■■□□ 2.64
CSPG5-205ENST00000610462 UBE2SQ16763 222 aa31.56■■■□□ 2.64
CSPG5-205ENST00000610462 ADSSL1Q8N142 457 aa31.56■■■□□ 2.64
CSPG5-205ENST00000610462 ZNF592Q92610 1267 aa31.56■■■□□ 2.64
CSPG5-205ENST00000610462 MMTAG2Q9BU76 263 aaKnown RBP31.56■■■□□ 2.64
CSPG5-205ENST00000610462 LIMA1Q9UHB6 759 aaKnown RBP31.56■■■□□ 2.64
CSPG5-205ENST00000610462 MYH7BA7E2Y1 1941 aa31.56■■■□□ 2.64
CSPG5-205ENST00000610462 TDP2O95551 362 aa31.56■■■□□ 2.64
CSPG5-205ENST00000610462 SLC1A4P43007 532 aa31.56■■■□□ 2.64
CSPG5-205ENST00000610462 SEPT2Q15019 361 aa31.56■■■□□ 2.64
CSPG5-205ENST00000610462 FCHSD1Q86WN1 690 aa31.56■■■□□ 2.64
CSPG5-205ENST00000610462 SIAH1Q8IUQ4 282 aa31.56■■■□□ 2.64
CSPG5-205ENST00000610462 PDCL3Q9H2J4 239 aa31.56■■■□□ 2.64
CSPG5-205ENST00000610462 SLC37A4O43826 429 aa31.55■■■□□ 2.64
CSPG5-205ENST00000610462 PBX1P40424 430 aa31.55■■■□□ 2.64
CSPG5-205ENST00000610462 TNNI2P48788 182 aa31.55■■■□□ 2.64
CSPG5-205ENST00000610462 SPAG1Q07617 926 aa31.55■■■□□ 2.64
CSPG5-205ENST00000610462 GRIPAP1Q4V328 841 aa31.55■■■□□ 2.64
CSPG5-205ENST00000610462 ARHGAP6O43182 974 aa31.55■■■□□ 2.64
CSPG5-205ENST00000610462 COBLO75128 1261 aa31.55■■■□□ 2.64
CSPG5-205ENST00000610462 ICA1Q05084 483 aa31.55■■■□□ 2.64
CSPG5-205ENST00000610462 PPP4R3AQ6IN85 833 aa31.55■■■□□ 2.64
CSPG5-205ENST00000610462 CALML4Q96GE6 196 aa31.55■■■□□ 2.64
CSPG5-205ENST00000610462 PRMT6Q96LA8 375 aaPredicted RBP31.55■■■□□ 2.64
CSPG5-205ENST00000610462 TMEM266Q2M3C6 531 aa31.54■■■□□ 2.64
CSPG5-205ENST00000610462 ABCB5Q2M3G0 1257 aa31.54■■■□□ 2.64
CSPG5-205ENST00000610462 BAG1Q99933 345 aaPredicted RBP31.54■■■□□ 2.64
CSPG5-205ENST00000610462 C7orf25Q9BPX7 421 aa31.54■■■□□ 2.64
CSPG5-205ENST00000610462 PSTPIP2Q9H939 334 aa31.54■■■□□ 2.64
CSPG5-205ENST00000610462 RGS17Q9UGC6 210 aaPredicted RBP31.54■■■□□ 2.64
CSPG5-205ENST00000610462 LRRC10BA6NIK2 292 aa31.53■■■□□ 2.64
CSPG5-205ENST00000610462 GIMAP8Q8ND71 665 aaPredicted RBP31.53■■■□□ 2.64
CSPG5-205ENST00000610462 GLT8D2Q9H1C3 349 aa31.53■■■□□ 2.64
CSPG5-205ENST00000610462 CTIFO43310 598 aaKnown RBP31.53■■■□□ 2.64
CSPG5-205ENST00000610462 RAD21O60216 631 aa31.53■■■□□ 2.64
CSPG5-205ENST00000610462 QRICH1Q2TAL8 776 aa31.53■■■□□ 2.64
CSPG5-205ENST00000610462 LRWD1Q9UFC0 647 aa31.53■■■□□ 2.64
CSPG5-205ENST00000610462 MAPK8IP1Q9UQF2 711 aa31.53■■■□□ 2.64
CSPG5-205ENST00000610462 STX10O60499 249 aa31.52■■■□□ 2.64
CSPG5-205ENST00000610462 ADKP55263 362 aaKnown RBP31.52■■■□□ 2.64
CSPG5-205ENST00000610462 KRT31Q15323 416 aa31.52■■■□□ 2.64
CSPG5-205ENST00000610462 POTEAQ6S8J7 498 aa31.52■■■□□ 2.64
CSPG5-205ENST00000610462 TSC1Q92574 1164 aa31.52■■■□□ 2.64
CSPG5-205ENST00000610462 CCDC47Q96A33 483 aaKnown RBP31.52■■■□□ 2.64
CSPG5-205ENST00000610462 TRIM9Q9C026 710 aa31.52■■■□□ 2.64
CSPG5-205ENST00000610462 H7C1D1 291 aa31.52■■■□□ 2.64
CSPG5-205ENST00000610462 GDF11O95390 407 aa31.52■■■□□ 2.64
CSPG5-205ENST00000610462 TUBB4AP04350 444 aa31.52■■■□□ 2.64
CSPG5-205ENST00000610462 AMPD3Q01432 767 aa31.52■■■□□ 2.64
CSPG5-205ENST00000610462 STIM1Q13586 685 aa31.52■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms