RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	FSD1	Q9BTV5	496 aa		24.95	■■□□□ 1.58
NECAB3-222	ENST00000607805	ZNF576	Q9H609	170 aa		24.95	■■□□□ 1.58
NECAB3-222	ENST00000607805	INCENP	Q9NQS7	918 aa		24.95	■■□□□ 1.58
NECAB3-222	ENST00000607805	SCN10A	Q9Y5Y9	1956 aa		24.94	■■□□□ 1.58
NECAB3-222	ENST00000607805	ASB14	A6NK59	587 aa		24.94	■■□□□ 1.58
NECAB3-222	ENST00000607805	PPP4R3B	Q5MIZ7	849 aa		24.94	■■□□□ 1.58
NECAB3-222	ENST00000607805	RASGRP2	Q7LDG7	609 aa		24.94	■■□□□ 1.58
NECAB3-222	ENST00000607805	VTI1A	Q96AJ9	217 aa		24.94	■■□□□ 1.58
NECAB3-222	ENST00000607805	DDX49	Q9Y6V7	483 aa	Known RBP	24.94	■■□□□ 1.58
NECAB3-222	ENST00000607805	SCN5A	Q14524	2016 aa		24.94	■■□□□ 1.58
NECAB3-222	ENST00000607805	GRIN2D	O15399	1336 aa		24.93	■■□□□ 1.58
NECAB3-222	ENST00000607805	NMT2	O60551	498 aa		24.93	■■□□□ 1.58
NECAB3-222	ENST00000607805	MUM1L1	Q5H9M0	696 aa		24.93	■■□□□ 1.58
NECAB3-222	ENST00000607805	TAPT1	Q6NXT6	567 aa		24.93	■■□□□ 1.58
NECAB3-222	ENST00000607805	ZNF365	Q70YC5	407 aa		24.93	■■□□□ 1.58
NECAB3-222	ENST00000607805	KCTD1	Q719H9	257 aa		24.93	■■□□□ 1.58
NECAB3-222	ENST00000607805	TMEM199	Q8N511	208 aa		24.93	■■□□□ 1.58
NECAB3-222	ENST00000607805	USP38	Q8NB14	1042 aa		24.93	■■□□□ 1.58
NECAB3-222	ENST00000607805	MORC4	Q8TE76	937 aa		24.93	■■□□□ 1.58
NECAB3-222	ENST00000607805	TIFA	Q96CG3	184 aa		24.93	■■□□□ 1.58
NECAB3-222	ENST00000607805	PBX4	Q9BYU1	374 aa		24.93	■■□□□ 1.58
NECAB3-222	ENST00000607805	CYP39A1	Q9NYL5	469 aa		24.93	■■□□□ 1.58
NECAB3-222	ENST00000607805	ANAPC4	Q9UJX5	808 aa		24.93	■■□□□ 1.58
NECAB3-222	ENST00000607805	PRR12	Q9ULL5	1215 aa		24.93	■■□□□ 1.58
NECAB3-222	ENST00000607805	GRXCR1	A8MXD5	290 aa		24.92	■■□□□ 1.58
NECAB3-222	ENST00000607805	TLR3	O15455	904 aa	Known RBP	24.92	■■□□□ 1.58
NECAB3-222	ENST00000607805	FGR	P09769	529 aa		24.92	■■□□□ 1.58
NECAB3-222	ENST00000607805	ALAS1	P13196	640 aa		24.92	■■□□□ 1.58
NECAB3-222	ENST00000607805	SMPD1	P17405	629 aa		24.92	■■□□□ 1.58
NECAB3-222	ENST00000607805	PTGS1	P23219	599 aa		24.92	■■□□□ 1.58
NECAB3-222	ENST00000607805	PBX2	P40425	430 aa		24.92	■■□□□ 1.58
NECAB3-222	ENST00000607805	CTDSPL2	Q05D32	466 aa		24.92	■■□□□ 1.58
NECAB3-222	ENST00000607805	CCDC174	Q6PII3	467 aa		24.92	■■□□□ 1.58
NECAB3-222	ENST00000607805	CXCL17	Q6UXB2	119 aa		24.92	■■□□□ 1.58
NECAB3-222	ENST00000607805	CCDC129	Q6ZRS4	1044 aa		24.92	■■□□□ 1.58
NECAB3-222	ENST00000607805	TLK2	Q86UE8	772 aa		24.92	■■□□□ 1.58
NECAB3-222	ENST00000607805	PPP1R12C	Q9BZL4	782 aa		24.92	■■□□□ 1.58
NECAB3-222	ENST00000607805	STX8	Q9UNK0	236 aa		24.92	■■□□□ 1.58
NECAB3-222	ENST00000607805	TRIP12	Q14669	1992 aa	Predicted RBP	24.91	■■□□□ 1.58
NECAB3-222	ENST00000607805	CABYR	O75952	493 aa		24.91	■■□□□ 1.58
NECAB3-222	ENST00000607805	ACR	P10323	421 aa		24.91	■■□□□ 1.58
NECAB3-222	ENST00000607805	MX1	P20591	662 aa		24.91	■■□□□ 1.58
NECAB3-222	ENST00000607805	CYP2C18	P33260	490 aa		24.91	■■□□□ 1.58
NECAB3-222	ENST00000607805	PSRC1	Q6PGN9	363 aa	Predicted RBP	24.91	■■□□□ 1.58
NECAB3-222	ENST00000607805	CHMP4C	Q96CF2	233 aa		24.91	■■□□□ 1.58
NECAB3-222	ENST00000607805	IL23A	Q9NPF7	189 aa		24.91	■■□□□ 1.58
NECAB3-222	ENST00000607805	PDGFC	Q9NRA1	345 aa		24.91	■■□□□ 1.58
NECAB3-222	ENST00000607805		Q9Y3F1	56 aa		24.91	■■□□□ 1.58
NECAB3-222	ENST00000607805	MYH6	P13533	1939 aa		24.9	■■□□□ 1.58
NECAB3-222	ENST00000607805	SNAP25	P60880	206 aa		24.9	■■□□□ 1.58
NECAB3-222	ENST00000607805	FSCN1	Q16658	493 aa	Known RBP	24.9	■■□□□ 1.58
NECAB3-222	ENST00000607805	TMEM63B	Q5T3F8	832 aa		24.9	■■□□□ 1.58
NECAB3-222	ENST00000607805	VPS53	Q5VIR6	699 aa		24.9	■■□□□ 1.58
NECAB3-222	ENST00000607805	TET1	Q8NFU7	2136 aa		24.9	■■□□□ 1.58
NECAB3-222	ENST00000607805	HERVK_113	Q902F9	699 aa		24.9	■■□□□ 1.58
NECAB3-222	ENST00000607805	XIRP2	A4UGR9	3374 aa		24.9	■■□□□ 1.58
NECAB3-222	ENST00000607805	TSPY2	A6NKD2	308 aa		24.89	■■□□□ 1.58
NECAB3-222	ENST00000607805	ORC4	O43929	436 aa		24.89	■■□□□ 1.58
NECAB3-222	ENST00000607805	IK	Q13123	557 aa	Predicted RBP	24.89	■■□□□ 1.58
NECAB3-222	ENST00000607805	IQSEC1	Q6DN90	963 aa		24.89	■■□□□ 1.58
NECAB3-222	ENST00000607805	BTNL9	Q6UXG8	535 aa		24.89	■■□□□ 1.58
NECAB3-222	ENST00000607805	SEZ6L	Q9BYH1	1024 aa		24.89	■■□□□ 1.58
NECAB3-222	ENST00000607805	ISY1	Q9ULR0	285 aa	Known RBP	24.89	■■□□□ 1.58
NECAB3-222	ENST00000607805	UMODL1	Q5DID0	1318 aa		24.88	■■□□□ 1.57
NECAB3-222	ENST00000607805	ITGA7	Q13683	1181 aa		24.88	■■□□□ 1.57
NECAB3-222	ENST00000607805	ALX1	Q15699	326 aa		24.88	■■□□□ 1.57
NECAB3-222	ENST00000607805	RANBP17	Q9H2T7	1088 aa	Known RBP	24.88	■■□□□ 1.57
NECAB3-222	ENST00000607805	CXXC1	Q9P0U4	656 aa	Predicted RBP	24.88	■■□□□ 1.57
NECAB3-222	ENST00000607805	DYNC1LI2	O43237	492 aa	Predicted RBP	24.87	■■□□□ 1.57
NECAB3-222	ENST00000607805	ICAM1	P05362	532 aa		24.87	■■□□□ 1.57
NECAB3-222	ENST00000607805	NOL8	Q76FK4	1167 aa	Known RBP	24.87	■■□□□ 1.57
NECAB3-222	ENST00000607805	FBXO16	Q8IX29	292 aa	Predicted RBP	24.87	■■□□□ 1.57
NECAB3-222	ENST00000607805	DCAF4	Q8WV16	495 aa		24.87	■■□□□ 1.57
NECAB3-222	ENST00000607805	VWCE	Q96DN2	955 aa		24.87	■■□□□ 1.57
NECAB3-222	ENST00000607805	PURB	Q96QR8	312 aa	Known RBP	24.87	■■□□□ 1.57
NECAB3-222	ENST00000607805	AP5M1	Q9H0R1	490 aa		24.87	■■□□□ 1.57
NECAB3-222	ENST00000607805	VTA1	Q9NP79	307 aa		24.87	■■□□□ 1.57
NECAB3-222	ENST00000607805	KIAA1217	Q5T5P2	1943 aa		24.86	■■□□□ 1.57
NECAB3-222	ENST00000607805	PRRC2B	Q5JSZ5	2229 aa	Known RBP	24.86	■■□□□ 1.57
NECAB3-222	ENST00000607805	TTBK2	Q6IQ55	1244 aa		24.86	■■□□□ 1.57
NECAB3-222	ENST00000607805	NOC4L	Q9BVI4	516 aa	Known RBP	24.86	■■□□□ 1.57
NECAB3-222	ENST00000607805	HIPK3	Q9H422	1215 aa		24.86	■■□□□ 1.57
NECAB3-222	ENST00000607805	CCPG1	Q9ULG6	757 aa		24.86	■■□□□ 1.57
NECAB3-222	ENST00000607805	RANBP6	O60518	1105 aa	Known RBP	24.85	■■□□□ 1.57
NECAB3-222	ENST00000607805	EEPD1	Q7L9B9	569 aa		24.85	■■□□□ 1.57
NECAB3-222	ENST00000607805	SYMPK	Q92797	1274 aa	Known RBP	24.85	■■□□□ 1.57
NECAB3-222	ENST00000607805	TRPV6	Q9H1D0	765 aa		24.85	■■□□□ 1.57
NECAB3-222	ENST00000607805	WNT8A	Q9H1J5	351 aa		24.85	■■□□□ 1.57
NECAB3-222	ENST00000607805	TANC1	Q9C0D5	1861 aa		24.85	■■□□□ 1.57
NECAB3-222	ENST00000607805	LOC102724159	A0A0B4J2E5	919 aa		24.84	■■□□□ 1.57
NECAB3-222	ENST00000607805	ZEB2	O60315	1214 aa		24.84	■■□□□ 1.57
NECAB3-222	ENST00000607805	B4GALT4	O60513	344 aa		24.84	■■□□□ 1.57
NECAB3-222	ENST00000607805	PWP2	Q15269	919 aa	Known RBP	24.84	■■□□□ 1.57
NECAB3-222	ENST00000607805	DUSP28	Q4G0W2	176 aa		24.84	■■□□□ 1.57
NECAB3-222	ENST00000607805	AKNAD1	Q5T1N1	836 aa		24.84	■■□□□ 1.57
NECAB3-222	ENST00000607805	NSMF	Q6X4W1	530 aa		24.84	■■□□□ 1.57
NECAB3-222	ENST00000607805	PRDM12	Q9H4Q4	367 aa		24.84	■■□□□ 1.57
NECAB3-222	ENST00000607805	HELLS	Q9NRZ9	838 aa		24.84	■■□□□ 1.57
NECAB3-222	ENST00000607805	TCP11L1	Q9NUJ3	509 aa		24.84	■■□□□ 1.57
NECAB3-222	ENST00000607805	LAMA4	Q16363	1823 aa		24.84	■■□□□ 1.57

Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms