RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 ZNF543Q08ER8 600 aa21.55■■□□□ 1.04
PRKCSH-209ENST00000589838 LRRC47Q8N1G4 583 aaKnown RBP21.55■■□□□ 1.04
PRKCSH-209ENST00000589838 DHTKD1Q96HY7 919 aaPredicted RBP21.55■■□□□ 1.04
PRKCSH-209ENST00000589838 KLRC4O43908 158 aa21.54■■□□□ 1.04
PRKCSH-209ENST00000589838 MFAP3LO75121 409 aa21.54■■□□□ 1.04
PRKCSH-209ENST00000589838 CCDC175P0C221 793 aa21.54■■□□□ 1.04
PRKCSH-209ENST00000589838 PLCG1P19174 1290 aa21.54■■□□□ 1.04
PRKCSH-209ENST00000589838 FKBP1AP62942 108 aaKnown RBP21.54■■□□□ 1.04
PRKCSH-209ENST00000589838 TMEM266Q2M3C6 531 aa21.54■■□□□ 1.04
PRKCSH-209ENST00000589838 GIMAP8Q8ND71 665 aaPredicted RBP21.54■■□□□ 1.04
PRKCSH-209ENST00000589838 C7orf25Q9BPX7 421 aa21.54■■□□□ 1.04
PRKCSH-209ENST00000589838 RAB34Q9BZG1 259 aa21.54■■□□□ 1.04
PRKCSH-209ENST00000589838 THAP9Q9H5L6 903 aa21.54■■□□□ 1.04
PRKCSH-209ENST00000589838 GPCPD1Q9NPB8 672 aa21.54■■□□□ 1.04
PRKCSH-209ENST00000589838 SHMT1P34896 483 aa21.54■■□□□ 1.04
PRKCSH-209ENST00000589838 SCNN1DP51172 638 aa21.54■■□□□ 1.04
PRKCSH-209ENST00000589838 EEF1GP26641 437 aaKnown RBP21.53■■□□□ 1.04
PRKCSH-209ENST00000589838 CCT6AP40227 531 aaKnown RBP21.53■■□□□ 1.04
PRKCSH-209ENST00000589838 TECP42680 631 aa21.53■■□□□ 1.04
PRKCSH-209ENST00000589838 CALCRLQ16602 461 aa21.53■■□□□ 1.04
PRKCSH-209ENST00000589838 APOBEC3HQ6NTF7 200 aaKnown RBP21.53■■□□□ 1.04
PRKCSH-209ENST00000589838 PLIN2Q99541 437 aa21.53■■□□□ 1.04
PRKCSH-209ENST00000589838 DHX36Q9H2U1 1008 aaKnown RBP21.53■■□□□ 1.04
PRKCSH-209ENST00000589838 RIC8AQ9NPQ8 531 aa21.53■■□□□ 1.04
PRKCSH-209ENST00000589838 MYH4Q9Y623 1939 aa21.52■■□□□ 1.04
PRKCSH-209ENST00000589838 BICDL2A1A5D9 508 aa21.52■■□□□ 1.04
PRKCSH-209ENST00000589838 MMP10P09238 476 aa21.52■■□□□ 1.04
PRKCSH-209ENST00000589838 HOXA7P31268 230 aaPredicted RBP21.52■■□□□ 1.04
PRKCSH-209ENST00000589838 CRKP46108 304 aa21.52■■□□□ 1.04
PRKCSH-209ENST00000589838 HDLBPQ00341 1268 aaKnown RBP21.52■■□□□ 1.04
PRKCSH-209ENST00000589838 TOGARAM2Q6ZUX3 1019 aa21.52■■□□□ 1.04
PRKCSH-209ENST00000589838 CPLX3Q8WVH0 158 aa21.52■■□□□ 1.04
PRKCSH-209ENST00000589838 COA7Q96BR5 231 aa21.52■■□□□ 1.04
PRKCSH-209ENST00000589838 ZDHHC15Q96MV8 337 aa21.52■■□□□ 1.04
PRKCSH-209ENST00000589838 VPS16Q9H269 839 aa21.52■■□□□ 1.04
PRKCSH-209ENST00000589838 EXOC1Q9NV70 894 aa21.52■■□□□ 1.04
PRKCSH-209ENST00000589838 MAGEC2Q9UBF1 373 aaPredicted RBP21.52■■□□□ 1.04
PRKCSH-209ENST00000589838 GREB1LQ9C091 1923 aaPredicted RBP21.52■■□□□ 1.04
PRKCSH-209ENST00000589838 MPHOSPH10O00566 681 aaKnown RBP21.52■■□□□ 1.03
PRKCSH-209ENST00000589838 CASQ1P31415 396 aa21.52■■□□□ 1.03
PRKCSH-209ENST00000589838 FXR2P51116 673 aaKnown RBP eCLIP21.52■■□□□ 1.032e-6■□□□□ 9.9
PRKCSH-209ENST00000589838 PDIA5Q14554 519 aa21.52■■□□□ 1.03
PRKCSH-209ENST00000589838 MTMR9Q96QG7 549 aa21.52■■□□□ 1.03
PRKCSH-209ENST00000589838 FEZ1Q99689 392 aa21.52■■□□□ 1.03
PRKCSH-209ENST00000589838 GLT8D2Q9H1C3 349 aa21.52■■□□□ 1.03
PRKCSH-209ENST00000589838 JMJD4Q9H9V9 463 aa21.52■■□□□ 1.03
PRKCSH-209ENST00000589838 TMEM260Q9NX78 707 aa21.52■■□□□ 1.03
PRKCSH-209ENST00000589838 TAB2Q9NYJ8 693 aa21.52■■□□□ 1.03
PRKCSH-209ENST00000589838 STK17AQ9UEE5 414 aa21.52■■□□□ 1.03
PRKCSH-209ENST00000589838 MAPK8IP1Q9UQF2 711 aa21.52■■□□□ 1.03
PRKCSH-209ENST00000589838 COL11A2P13942 1736 aaPredicted RBP21.51■■□□□ 1.03
PRKCSH-209ENST00000589838 FECHP22830 423 aa21.51■■□□□ 1.03
PRKCSH-209ENST00000589838 CASP14P31944 242 aa21.51■■□□□ 1.03
PRKCSH-209ENST00000589838 MRPL12P52815 198 aaKnown RBP21.51■■□□□ 1.03
PRKCSH-209ENST00000589838 EIF6P56537 245 aaKnown RBP21.51■■□□□ 1.03
PRKCSH-209ENST00000589838 TMTC1Q8IUR5 882 aa21.51■■□□□ 1.03
PRKCSH-209ENST00000589838 ADGRF4Q8IZF3 695 aa21.51■■□□□ 1.03
PRKCSH-209ENST00000589838 ZNF397Q8NF99 534 aaPredicted RBP21.51■■□□□ 1.03
PRKCSH-209ENST00000589838 ZNF622Q969S3 477 aaKnown RBP eCLIP21.51■■□□□ 1.036e-13■□□□□ 9.9
PRKCSH-209ENST00000589838 NAP1L4Q99733 375 aaKnown RBP21.51■■□□□ 1.03
PRKCSH-209ENST00000589838 MXD3Q9BW11 206 aa21.51■■□□□ 1.03
PRKCSH-209ENST00000589838 TRIM9Q9C026 710 aa21.51■■□□□ 1.03
PRKCSH-209ENST00000589838 APBA3O96018 575 aa21.5■■□□□ 1.03
PRKCSH-209ENST00000589838 GNG11P61952 73 aa21.5■■□□□ 1.03
PRKCSH-209ENST00000589838 NAA30Q147X3 362 aaPredicted RBP21.5■■□□□ 1.03
PRKCSH-209ENST00000589838 CCDC96Q2M329 555 aa21.5■■□□□ 1.03
PRKCSH-209ENST00000589838 POTEDQ86YR6 584 aa21.5■■□□□ 1.03
PRKCSH-209ENST00000589838 CUL5Q93034 780 aa21.5■■□□□ 1.03
PRKCSH-209ENST00000589838 TRIM47Q96LD4 638 aa21.5■■□□□ 1.03
PRKCSH-209ENST00000589838 LRRC27Q9C0I9 530 aa21.5■■□□□ 1.03
PRKCSH-209ENST00000589838 LRWD1Q9UFC0 647 aa21.5■■□□□ 1.03
PRKCSH-209ENST00000589838 COBLO75128 1261 aa21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 URI1O94763 535 aaPredicted RBP21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 GYPCP04921 128 aa21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 TXKP42681 527 aa21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 ASIC1P78348 528 aa21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 UBXN1Q04323 297 aa21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 PDE4DQ08499 809 aa21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 COBLL1Q53SF7 1204 aa21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 STRIP1Q5VSL9 837 aa21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 CNNM4Q6P4Q7 775 aa21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 SV2BQ7L1I2 683 aa21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 CREBRFQ8IUR6 639 aa21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 FAM114A1Q8IWE2 563 aa21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 CDK5RAP3Q96JB5 506 aa21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 CCNE1P24864 410 aa21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 PPP4R3AQ6IN85 833 aa21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 STYK1Q6J9G0 422 aa21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 ADGRG1Q9Y653 693 aa21.49■■□□□ 1.03
PRKCSH-209ENST00000589838 A0A1W2PQC6 194 aa21.48■■□□□ 1.03
PRKCSH-209ENST00000589838 SOWAHDA6NJG2 315 aa21.48■■□□□ 1.03
PRKCSH-209ENST00000589838 ZBTB5O15062 677 aa21.48■■□□□ 1.03
PRKCSH-209ENST00000589838 NPM3O75607 178 aaKnown RBP21.48■■□□□ 1.03
PRKCSH-209ENST00000589838 ATP2B2Q01814 1243 aa21.48■■□□□ 1.03
PRKCSH-209ENST00000589838 C2CD5Q86YS7 1000 aa21.48■■□□□ 1.03
PRKCSH-209ENST00000589838 MNS1Q8NEH6 495 aa21.48■■□□□ 1.03
PRKCSH-209ENST00000589838 MTMR8Q96EF0 704 aa21.48■■□□□ 1.03
PRKCSH-209ENST00000589838 NUP88Q99567 741 aaPredicted RBP21.48■■□□□ 1.03
PRKCSH-209ENST00000589838 MMTAG2Q9BU76 263 aaKnown RBP21.48■■□□□ 1.03
PRKCSH-209ENST00000589838 LGALS16A8MUM7 142 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms