RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 CCDC70Q6NSX1 233 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 FAM196AQ6ZSG2 479 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 SMARCC1Q92922 1105 aaPredicted RBP15.24■□□□□ 0.03
NDEL1-204ENST00000578172 C6orf50Q9HD87 102 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 BMP2KQ9NSY1 1161 aaPredicted RBP15.24■□□□□ 0.03
NDEL1-204ENST00000578172 DDAH1O94760 285 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 MOCS3O95396 460 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 CYLC1P35663 651 aaPredicted RBP15.24■□□□□ 0.03
NDEL1-204ENST00000578172 ZNF512BQ96KM6 892 aaPredicted RBP15.24■□□□□ 0.03
NDEL1-204ENST00000578172 ARPP21Q9UBL0 812 aaPredicted RBP15.24■□□□□ 0.03
NDEL1-204ENST00000578172 ADAM21Q9UKJ8 722 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 BCS1LQ9Y276 419 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 KRT86O43790 486 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 ZNF579Q8NAF0 562 aaKnown RBP15.24■□□□□ 0.03
NDEL1-204ENST00000578172 MEIS1O00470 390 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 RAPGEF1Q13905 1077 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 LLGL1Q15334 1064 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 ANKRD40Q6AI12 368 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 HDXQ7Z353 690 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 CEP95Q96GE4 821 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 MMS19Q96T76 1030 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 LACRTQ9GZZ8 138 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 IL17RBQ9NRM6 502 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 PACSIN2Q9UNF0 486 aaPredicted RBP15.24■□□□□ 0.03
NDEL1-204ENST00000578172 SAR1BQ9Y6B6 198 aa15.24■□□□□ 0.03
NDEL1-204ENST00000578172 OR52Z1P0C646 297 aa15.23■□□□□ 0.03
NDEL1-204ENST00000578172 GTF2A1P52655 376 aaPredicted RBP15.23■□□□□ 0.03
NDEL1-204ENST00000578172 MAEAQ7L5Y9 396 aa15.23■□□□□ 0.03
NDEL1-204ENST00000578172 REXO1Q8N1G1 1221 aaKnown RBP15.23■□□□□ 0.03
NDEL1-204ENST00000578172 MB21D1Q8N884 522 aa15.23■□□□□ 0.03
NDEL1-204ENST00000578172 TMCO5BA8MYB1 307 aa15.23■□□□□ 0.03
NDEL1-204ENST00000578172 CYP4A11Q02928 519 aa15.23■□□□□ 0.03
NDEL1-204ENST00000578172 TBX2Q13207 712 aaPredicted RBP15.23■□□□□ 0.03
NDEL1-204ENST00000578172 ZYXQ15942 572 aaKnown RBP15.23■□□□□ 0.03
NDEL1-204ENST00000578172 CALCRLQ16602 461 aa15.23■□□□□ 0.03
NDEL1-204ENST00000578172 SND1Q7KZF4 910 aaKnown RBP eCLIP15.23■□□□□ 0.03
NDEL1-204ENST00000578172 GLIS3Q8NEA6 775 aa15.23■□□□□ 0.03
NDEL1-204ENST00000578172 KIFC2Q96AC6 838 aa15.23■□□□□ 0.03
NDEL1-204ENST00000578172 PANX2Q96RD6 677 aa15.23■□□□□ 0.03
NDEL1-204ENST00000578172 KCTD16Q68DU8 428 aa15.23■□□□□ 0.03
NDEL1-204ENST00000578172 TTBK2Q6IQ55 1244 aa15.23■□□□□ 0.03
NDEL1-204ENST00000578172 BRIP1Q9BX63 1249 aa15.23■□□□□ 0.03
NDEL1-204ENST00000578172 BCCIPQ9P287 314 aaKnown RBP eCLIP15.23■□□□□ 0.03
NDEL1-204ENST00000578172 PCDHA6Q9UN73 950 aa15.23■□□□□ 0.03
NDEL1-204ENST00000578172 PCDHA8Q9Y5H6 950 aa15.23■□□□□ 0.03
NDEL1-204ENST00000578172 LMTK3Q96Q04 1460 aa15.22■□□□□ 0.03
NDEL1-204ENST00000578172 ESYT3A0FGR9 886 aa15.22■□□□□ 0.03
NDEL1-204ENST00000578172 CYTH3O43739 400 aa15.22■□□□□ 0.03
NDEL1-204ENST00000578172 IRX3P78415 501 aaPredicted RBP15.22■□□□□ 0.03
NDEL1-204ENST00000578172 RASSF7Q02833 373 aa15.22■□□□□ 0.03
NDEL1-204ENST00000578172 DCAF17Q5H9S7 520 aaPredicted RBP15.22■□□□□ 0.03
NDEL1-204ENST00000578172 SV2BQ7L1I2 683 aa15.22■□□□□ 0.03
NDEL1-204ENST00000578172 FCHSD1Q86WN1 690 aa15.22■□□□□ 0.03
NDEL1-204ENST00000578172 RWDD2AQ9UIY3 292 aa15.22■□□□□ 0.03
NDEL1-204ENST00000578172 BCL9O00512 1426 aa15.22■□□□□ 0.03
NDEL1-204ENST00000578172 TRIM66O15016 1216 aa15.22■□□□□ 0.03
NDEL1-204ENST00000578172 CHMP2AO43633 222 aa15.22■□□□□ 0.03
NDEL1-204ENST00000578172 HLTFQ14527 1009 aaKnown RBP eCLIP15.22■□□□□ 0.03
NDEL1-204ENST00000578172 ARHGEF1Q92888 912 aaKnown RBP15.22■□□□□ 0.03
NDEL1-204ENST00000578172 IFIH1Q9BYX4 1025 aaKnown RBP15.22■□□□□ 0.03
NDEL1-204ENST00000578172 ACBD3Q9H3P7 528 aa15.22■□□□□ 0.03
NDEL1-204ENST00000578172 GOLPH3Q9H4A6 298 aa15.22■□□□□ 0.03
NDEL1-204ENST00000578172 ATP8A2Q9NTI2 1148 aa15.22■□□□□ 0.03
NDEL1-204ENST00000578172 UBXN2AP68543 259 aa15.22■□□□□ 0.03
NDEL1-204ENST00000578172 CASP8Q14790 479 aa15.22■□□□□ 0.03
NDEL1-204ENST00000578172 TMEM266Q2M3C6 531 aa15.22■□□□□ 0.03
NDEL1-204ENST00000578172 NHEJ1Q9H9Q4 299 aaPredicted RBP15.22■□□□□ 0.03
NDEL1-204ENST00000578172 ZEB2O60315 1214 aa15.21■□□□□ 0.03
NDEL1-204ENST00000578172 CDK8P49336 464 aa15.21■□□□□ 0.03
NDEL1-204ENST00000578172 GUCY2FP51841 1108 aa15.21■□□□□ 0.03
NDEL1-204ENST00000578172 LAMA4Q16363 1823 aa15.21■□□□□ 0.03
NDEL1-204ENST00000578172 MYO5AQ9Y4I1 1855 aaKnown RBP15.21■□□□□ 0.03
NDEL1-204ENST00000578172 NPHP3-ACAD11A0A0J9YXS1 232 aa15.21■□□□□ 0.03
NDEL1-204ENST00000578172 PRPF4BQ13523 1007 aaKnown RBP15.21■□□□□ 0.03
NDEL1-204ENST00000578172 EZH2Q15910 746 aaKnown RBP15.21■□□□□ 0.03
NDEL1-204ENST00000578172 TRAPPC3LQ5T215 181 aa15.21■□□□□ 0.03
NDEL1-204ENST00000578172 KRT79Q5XKE5 535 aa15.21■□□□□ 0.03
NDEL1-204ENST00000578172 ZNF804AQ7Z570 1209 aa15.21■□□□□ 0.03
NDEL1-204ENST00000578172 SPICE1Q8N0Z3 855 aa15.21■□□□□ 0.03
NDEL1-204ENST00000578172 ANKRD2Q9GZV1 360 aa15.21■□□□□ 0.03
NDEL1-204ENST00000578172 MRC1P22897 1456 aa15.21■□□□□ 0.03
NDEL1-204ENST00000578172 SCN11AQ9UI33 1791 aa15.21■□□□□ 0.02
NDEL1-204ENST00000578172 H7C1D1 291 aa15.21■□□□□ 0.02
NDEL1-204ENST00000578172 NEK8Q86SG6 692 aa15.21■□□□□ 0.02
NDEL1-204ENST00000578172 AMIGO3Q86WK7 504 aa15.21■□□□□ 0.02
NDEL1-204ENST00000578172 FAM204AQ9H8W3 233 aa15.21■□□□□ 0.02
NDEL1-204ENST00000578172 USP17L15C9J2P7 530 aa15.2■□□□□ 0.02
NDEL1-204ENST00000578172 USP17L13C9JLJ4 530 aa15.2■□□□□ 0.02
NDEL1-204ENST00000578172 USP17L11C9JVI0 530 aa15.2■□□□□ 0.02
NDEL1-204ENST00000578172 USP17L18D6R9N7 530 aa15.2■□□□□ 0.02
NDEL1-204ENST00000578172 USP17L22D6RA61 530 aa15.2■□□□□ 0.02
NDEL1-204ENST00000578172 USP17L17D6RBQ6 530 aa15.2■□□□□ 0.02
NDEL1-204ENST00000578172 USP17L19D6RCP7 530 aa15.2■□□□□ 0.02
NDEL1-204ENST00000578172 USP17L20D6RJB6 530 aa15.2■□□□□ 0.02
NDEL1-204ENST00000578172 USO1O60763 962 aaKnown RBP15.2■□□□□ 0.02
NDEL1-204ENST00000578172 ZNF76P36508 570 aa15.2■□□□□ 0.02
NDEL1-204ENST00000578172 MAGEA1P43355 309 aa15.2■□□□□ 0.02
NDEL1-204ENST00000578172 USP17L24Q0WX57 530 aa15.2■□□□□ 0.02
NDEL1-204ENST00000578172 FUT2Q10981 343 aa15.2■□□□□ 0.02
NDEL1-204ENST00000578172 HERC4Q5GLZ8 1057 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms