RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 C11orf49Q9H6J7 331 aa10.65□□□□□ -0.7
NDE1-207ENST00000573203 KAT14Q9H8E8 782 aa10.65□□□□□ -0.7
NDE1-207ENST00000573203 ALPK3Q96L96 1907 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 SMCHD1A6NHR9 2005 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 H0YGN5 161 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 SEPT4O43236 478 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 EVI5O60447 810 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 PDHBP11177 359 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 ALAS1P13196 640 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 TRDNQ13061 729 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 TKFCQ3LXA3 575 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 PRAMEF19Q5SWL8 479 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 SYDE2Q5VT97 1194 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 ANO1Q5XXA6 986 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 BTNL9Q6UXG8 535 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.64□□□□□ -0.71
NDE1-207ENST00000573203 TRERF1Q96PN7 1200 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 ZSCAN10Q96SZ4 725 aaPredicted RBP10.64□□□□□ -0.71
NDE1-207ENST00000573203 TINF2Q9BSI4 451 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 UBAC1Q9BSL1 405 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 ACAD9Q9H845 621 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 RNF146Q9NTX7 359 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 ZSWIM5Q9P217 1185 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 NR2E3Q9Y5X4 410 aa10.64□□□□□ -0.71
NDE1-207ENST00000573203 ZNF536O15090 1300 aa10.63□□□□□ -0.71
NDE1-207ENST00000573203 TNKSO95271 1327 aa10.63□□□□□ -0.71
NDE1-207ENST00000573203 CEP290O15078 2479 aa10.63□□□□□ -0.71
NDE1-207ENST00000573203 MCM3APO60318 1980 aa10.63□□□□□ -0.71
NDE1-207ENST00000573203 DNAJC25-GNG10A0A024R161 153 aa10.63□□□□□ -0.71
NDE1-207ENST00000573203 GTPBP6O43824 516 aaPredicted RBP10.63□□□□□ -0.71
NDE1-207ENST00000573203 EIF5BO60841 1220 aaKnown RBP10.63□□□□□ -0.71
NDE1-207ENST00000573203 ZNF543Q08ER8 600 aa10.63□□□□□ -0.71
NDE1-207ENST00000573203 KIAA1211Q6ZU35 1233 aa10.63□□□□□ -0.71
NDE1-207ENST00000573203 PNMA1Q8ND90 353 aa10.63□□□□□ -0.71
NDE1-207ENST00000573203 RANBP17Q9H2T7 1088 aaKnown RBP10.63□□□□□ -0.71
NDE1-207ENST00000573203 ZSWIM6Q9HCJ5 1215 aa10.63□□□□□ -0.71
NDE1-207ENST00000573203 NRBP1Q9UHY1 535 aa10.63□□□□□ -0.71
NDE1-207ENST00000573203 CCPG1Q9ULG6 757 aa10.63□□□□□ -0.71
NDE1-207ENST00000573203 CNPY2Q9Y2B0 182 aa10.63□□□□□ -0.71
NDE1-207ENST00000573203 SYNGAP1Q96PV0 1343 aa10.62□□□□□ -0.71
NDE1-207ENST00000573203 ICAM1P05362 532 aa10.62□□□□□ -0.71
NDE1-207ENST00000573203 CYP21A2P08686 494 aa10.62□□□□□ -0.71
NDE1-207ENST00000573203 SNHG28P0DPA3 235 aa10.62□□□□□ -0.71
NDE1-207ENST00000573203 TAL1P17542 331 aaPredicted RBP10.62□□□□□ -0.71
NDE1-207ENST00000573203 GPATCH4Q5T3I0 446 aaKnown RBP10.62□□□□□ -0.71
NDE1-207ENST00000573203 IFIT1BQ5T764 474 aaKnown RBP10.62□□□□□ -0.71
NDE1-207ENST00000573203 SKAP1Q86WV1 359 aa10.62□□□□□ -0.71
NDE1-207ENST00000573203 MSL3Q8N5Y2 521 aaKnown RBP10.62□□□□□ -0.71
NDE1-207ENST00000573203 ENAHQ8N8S7 591 aaPredicted RBP10.62□□□□□ -0.71
NDE1-207ENST00000573203 ARRDC4Q8NCT1 418 aa10.62□□□□□ -0.71
NDE1-207ENST00000573203 BBXQ8WY36 941 aaPredicted RBP10.62□□□□□ -0.71
NDE1-207ENST00000573203 ANKS1AQ92625 1134 aa10.62□□□□□ -0.71
NDE1-207ENST00000573203 A1CFQ9NQ94 594 aaKnown RBP10.62□□□□□ -0.71
NDE1-207ENST00000573203 MYH6P13533 1939 aa10.62□□□□□ -0.71
NDE1-207ENST00000573203 PFASO15067 1338 aa10.61□□□□□ -0.71
NDE1-207ENST00000573203 KBTBD13C9JR72 458 aa10.61□□□□□ -0.71
NDE1-207ENST00000573203 DNM1LO00429 736 aa10.61□□□□□ -0.71
NDE1-207ENST00000573203 GOLGA8HP0CJ92 632 aa10.61□□□□□ -0.71
NDE1-207ENST00000573203 RARBP10826 455 aa10.61□□□□□ -0.71
NDE1-207ENST00000573203 ANP32AP39687 249 aaKnown RBP10.61□□□□□ -0.71
NDE1-207ENST00000573203 CNTN2Q02246 1040 aa10.61□□□□□ -0.71
NDE1-207ENST00000573203 BMP2KLQ5H9B9 411 aa10.61□□□□□ -0.71
NDE1-207ENST00000573203 MUM1L1Q5H9M0 696 aa10.61□□□□□ -0.71
NDE1-207ENST00000573203 GJC2Q5T442 439 aaPredicted RBP10.61□□□□□ -0.71
NDE1-207ENST00000573203 MAMDC4Q6UXC1 1216 aa10.61□□□□□ -0.71
NDE1-207ENST00000573203 NSMFQ6X4W1 530 aa10.61□□□□□ -0.71
NDE1-207ENST00000573203 CYB5R4Q7L1T6 521 aa10.61□□□□□ -0.71
NDE1-207ENST00000573203 RALYLQ86SE5 291 aaKnown RBP10.61□□□□□ -0.71
NDE1-207ENST00000573203 C7orf61Q8IZ16 206 aa10.61□□□□□ -0.71
NDE1-207ENST00000573203 TMC2Q8TDI7 906 aa10.61□□□□□ -0.71
NDE1-207ENST00000573203 MAP4K1Q92918 833 aa10.61□□□□□ -0.71
NDE1-207ENST00000573203 SENP6Q9GZR1 1112 aaPredicted RBP10.61□□□□□ -0.71
NDE1-207ENST00000573203 UBA5Q9GZZ9 404 aa10.61□□□□□ -0.71
NDE1-207ENST00000573203 ZHX1Q9UKY1 873 aaPredicted RBP10.61□□□□□ -0.71
NDE1-207ENST00000573203 PNMA2Q9UL42 364 aa10.61□□□□□ -0.71
NDE1-207ENST00000573203 RBM8AQ9Y5S9 174 aaKnown RBP10.61□□□□□ -0.71
NDE1-207ENST00000573203 DNAH12Q6ZR08 3092 aa10.61□□□□□ -0.71
NDE1-207ENST00000573203 ERICH2A1L162 156 aa10.6□□□□□ -0.71
NDE1-207ENST00000573203 E7EWF7 191 aa10.6□□□□□ -0.71
NDE1-207ENST00000573203 SNAI1O95863 264 aaPredicted RBP10.6□□□□□ -0.71
NDE1-207ENST00000573203 PARP1P09874 1014 aaKnown RBP10.6□□□□□ -0.71
NDE1-207ENST00000573203 ZNF865P0CJ78 1059 aaPredicted RBP10.6□□□□□ -0.71
NDE1-207ENST00000573203 COL6A1P12109 1028 aa10.6□□□□□ -0.71
NDE1-207ENST00000573203 AKR1A1P14550 325 aa10.6□□□□□ -0.71
NDE1-207ENST00000573203 SART3Q15020 963 aaKnown RBP10.6□□□□□ -0.71
NDE1-207ENST00000573203 ASPRV1Q53RT3 343 aa10.6□□□□□ -0.71
NDE1-207ENST00000573203 ARMCX2Q7L311 632 aa10.6□□□□□ -0.71
NDE1-207ENST00000573203 FAM133AQ8N9E0 248 aa10.6□□□□□ -0.71
NDE1-207ENST00000573203 NCOA7Q8NI08 942 aa10.6□□□□□ -0.71
NDE1-207ENST00000573203 FGD4Q96M96 766 aa10.6□□□□□ -0.71
NDE1-207ENST00000573203 ESYT1Q9BSJ8 1104 aa10.6□□□□□ -0.71
NDE1-207ENST00000573203 CPVLQ9H3G5 476 aa10.6□□□□□ -0.71
NDE1-207ENST00000573203 XPNPEP3Q9NQH7 507 aa10.6□□□□□ -0.71
NDE1-207ENST00000573203 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.6□□□□□ -0.71
NDE1-207ENST00000573203 CYP39A1Q9NYL5 469 aa10.6□□□□□ -0.71
NDE1-207ENST00000573203 FAM184BQ9ULE4 1060 aa10.6□□□□□ -0.71
NDE1-207ENST00000573203 LCTP09848 1927 aa10.59□□□□□ -0.71
NDE1-207ENST00000573203 PTPDC1A2A3K4 754 aa10.59□□□□□ -0.71
NDE1-207ENST00000573203 C2orf72A6NCS6 295 aa10.59□□□□□ -0.71
NDE1-207ENST00000573203 ASB14A6NK59 587 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms