RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 LARGE1O95461 756 aa16.37■□□□□ 0.21
SNX6-206ENST00000556162 CTU1Q7Z7A3 348 aaKnown RBP16.37■□□□□ 0.21
SNX6-206ENST00000556162 ABRAQ8N0Z2 381 aa16.37■□□□□ 0.21
SNX6-206ENST00000556162 NECAB1Q8N987 351 aa16.37■□□□□ 0.21
SNX6-206ENST00000556162 MMP19Q99542 508 aa16.37■□□□□ 0.21
SNX6-206ENST00000556162 NUDT12Q9BQG2 462 aa16.37■□□□□ 0.21
SNX6-206ENST00000556162 SH2B1Q9NRF2 756 aaPredicted RBP16.37■□□□□ 0.21
SNX6-206ENST00000556162 RBM27Q9P2N5 1060 aaKnown RBP16.37■□□□□ 0.21
SNX6-206ENST00000556162 SRRDQ9UH36 339 aa16.37■□□□□ 0.21
SNX6-206ENST00000556162 MRPL11Q9Y3B7 192 aaKnown RBP16.37■□□□□ 0.21
SNX6-206ENST00000556162 PPP1R11O60927 126 aaPredicted RBP16.36■□□□□ 0.21
SNX6-206ENST00000556162 CDKL5O76039 1030 aa16.36■□□□□ 0.21
SNX6-206ENST00000556162 TAL1P17542 331 aaPredicted RBP16.36■□□□□ 0.21
SNX6-206ENST00000556162 PRMT2P55345 433 aa16.36■□□□□ 0.21
SNX6-206ENST00000556162 TRIM22Q8IYM9 498 aa16.36■□□□□ 0.21
SNX6-206ENST00000556162 ANKRD35Q8N283 1001 aa16.36■□□□□ 0.21
SNX6-206ENST00000556162 SOCS4Q8WXH5 440 aa16.36■□□□□ 0.21
SNX6-206ENST00000556162 PHKBQ93100 1093 aa16.36■□□□□ 0.21
SNX6-206ENST00000556162 GTF3C6Q969F1 213 aa16.36■□□□□ 0.21
SNX6-206ENST00000556162 GJD2Q9UKL4 321 aa16.36■□□□□ 0.21
SNX6-206ENST00000556162 PRPF3O43395 683 aaKnown RBP16.35■□□□□ 0.21
SNX6-206ENST00000556162 FLT3LGP49771 235 aa16.35■□□□□ 0.21
SNX6-206ENST00000556162 PRKCZQ05513 592 aa16.35■□□□□ 0.21
SNX6-206ENST00000556162 SSRP1Q08945 709 aaKnown RBP16.35■□□□□ 0.21
SNX6-206ENST00000556162 GRB14Q14449 540 aa16.35■□□□□ 0.21
SNX6-206ENST00000556162 MUM1L1Q5H9M0 696 aa16.35■□□□□ 0.21
SNX6-206ENST00000556162 MORN1Q5T089 497 aa16.35■□□□□ 0.21
SNX6-206ENST00000556162 DDX11Q96FC9 970 aa16.35■□□□□ 0.21
SNX6-206ENST00000556162 SLC26A6Q9BXS9 759 aa16.35■□□□□ 0.21
SNX6-206ENST00000556162 RNF26Q9BY78 433 aaPredicted RBP16.35■□□□□ 0.21
SNX6-206ENST00000556162 ADORA2AP29274 412 aa16.35■□□□□ 0.21
SNX6-206ENST00000556162 DPP9Q86TI2 863 aa16.35■□□□□ 0.21
SNX6-206ENST00000556162 CLEC4DQ8WXI8 215 aa16.35■□□□□ 0.21
SNX6-206ENST00000556162 GABRQQ9UN88 632 aa16.35■□□□□ 0.21
SNX6-206ENST00000556162 PPFIA3O75145 1194 aa16.34■□□□□ 0.21
SNX6-206ENST00000556162 CD2BP2O95400 341 aaKnown RBP16.34■□□□□ 0.21
SNX6-206ENST00000556162 RGS2P41220 211 aa16.34■□□□□ 0.21
SNX6-206ENST00000556162 MAP2K5Q13163 448 aa16.34■□□□□ 0.21
SNX6-206ENST00000556162 NSMFQ6X4W1 530 aa16.34■□□□□ 0.21
SNX6-206ENST00000556162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.34■□□□□ 0.21
SNX6-206ENST00000556162 HEATR3Q7Z4Q2 680 aa16.34■□□□□ 0.21
SNX6-206ENST00000556162 MCF2L2Q86YR7 1114 aa16.34■□□□□ 0.21
SNX6-206ENST00000556162 SLC5A4Q9NY91 659 aa16.34■□□□□ 0.21
SNX6-206ENST00000556162 NFIBO00712 420 aa16.33■□□□□ 0.21
SNX6-206ENST00000556162 CYP2B6P20813 491 aa16.33■□□□□ 0.21
SNX6-206ENST00000556162 PKN2Q16513 984 aaKnown RBP16.33■□□□□ 0.21
SNX6-206ENST00000556162 PFKFB3Q16875 520 aaPredicted RBP16.33■□□□□ 0.21
SNX6-206ENST00000556162 RGS22Q8NE09 1264 aa16.33■□□□□ 0.21
SNX6-206ENST00000556162 RAET1EQ8TD07 263 aa16.33■□□□□ 0.21
SNX6-206ENST00000556162 A1CFQ9NQ94 594 aaKnown RBP16.33■□□□□ 0.21
SNX6-206ENST00000556162 PTPN22Q9Y2R2 807 aa16.33■□□□□ 0.21
SNX6-206ENST00000556162 PFASO15067 1338 aa16.33■□□□□ 0.21
SNX6-206ENST00000556162 SCG2P13521 617 aa16.33■□□□□ 0.2
SNX6-206ENST00000556162 CCDC83Q8IWF9 413 aa16.33■□□□□ 0.2
SNX6-206ENST00000556162 USP6NLQ92738 828 aa16.33■□□□□ 0.2
SNX6-206ENST00000556162 MAF1Q9H063 256 aa16.33■□□□□ 0.2
SNX6-206ENST00000556162 MGAMO43451 1857 aa16.32■□□□□ 0.2
SNX6-206ENST00000556162 PTPDC1A2A3K4 754 aa16.32■□□□□ 0.2
SNX6-206ENST00000556162 hCG_1984214I3L0E3 225 aa16.32■□□□□ 0.2
SNX6-206ENST00000556162 DEXIO95424 95 aa16.32■□□□□ 0.2
SNX6-206ENST00000556162 PGK2P07205 417 aa16.32■□□□□ 0.2
SNX6-206ENST00000556162 IRF5Q13568 498 aa16.32■□□□□ 0.2
SNX6-206ENST00000556162 RNF207Q6ZRF8 634 aa16.32■□□□□ 0.2
SNX6-206ENST00000556162 ZNF713Q8N859 430 aaPredicted RBP16.32■□□□□ 0.2
SNX6-206ENST00000556162 GPKOWQ92917 476 aaPredicted RBP eCLIP16.32■□□□□ 0.2
SNX6-206ENST00000556162 TMX3Q96JJ7 454 aa16.32■□□□□ 0.2
SNX6-206ENST00000556162 CYP39A1Q9NYL5 469 aa16.32■□□□□ 0.2
SNX6-206ENST00000556162 ZSWIM8A7E2V4 1837 aa16.32■□□□□ 0.2
SNX6-206ENST00000556162 POTEB2H3BUK9 544 aa16.31■□□□□ 0.2
SNX6-206ENST00000556162 COBLO75128 1261 aa16.31■□□□□ 0.2
SNX6-206ENST00000556162 CTDNEP1O95476 244 aa16.31■□□□□ 0.2
SNX6-206ENST00000556162 HOXC6P09630 235 aa16.31■□□□□ 0.2
SNX6-206ENST00000556162 XRCC5P13010 732 aaKnown RBP16.31■□□□□ 0.2
SNX6-206ENST00000556162 BAATQ14032 418 aaPredicted RBP16.31■□□□□ 0.2
SNX6-206ENST00000556162 PKN1Q16512 942 aa16.31■□□□□ 0.2
SNX6-206ENST00000556162 WWC2Q6AWC2 1192 aa16.31■□□□□ 0.2
SNX6-206ENST00000556162 BARHL2Q9NY43 387 aa16.31■□□□□ 0.2
SNX6-206ENST00000556162 DOCK3Q8IZD9 2030 aa16.31■□□□□ 0.2
SNX6-206ENST00000556162 MYH6P13533 1939 aa16.31■□□□□ 0.2
SNX6-206ENST00000556162 SMCHD1A6NHR9 2005 aa16.31■□□□□ 0.2
SNX6-206ENST00000556162 CFBP00751 764 aa16.31■□□□□ 0.2
SNX6-206ENST00000556162 NAPAP54920 295 aa16.31■□□□□ 0.2
SNX6-206ENST00000556162 RPS6P62753 249 aaKnown RBP16.31■□□□□ 0.2
SNX6-206ENST00000556162 FBXO46Q6PJ61 603 aaPredicted RBP16.31■□□□□ 0.2
SNX6-206ENST00000556162 TBC1D5Q92609 795 aa16.31■□□□□ 0.2
SNX6-206ENST00000556162 APBA2Q99767 749 aa16.31■□□□□ 0.2
SNX6-206ENST00000556162 LLPHQ9BRT6 129 aaKnown RBP16.31■□□□□ 0.2
SNX6-206ENST00000556162 MAP3K20Q9NYL2 800 aaKnown RBP16.31■□□□□ 0.2
SNX6-206ENST00000556162 PTCH2Q9Y6C5 1203 aa16.31■□□□□ 0.2
SNX6-206ENST00000556162 DNAJC25-GNG10A0A024R161 153 aa16.3■□□□□ 0.2
SNX6-206ENST00000556162 ADCY3O60266 1144 aa16.3■□□□□ 0.2
SNX6-206ENST00000556162 CALML3P27482 149 aa16.3■□□□□ 0.2
SNX6-206ENST00000556162 ST3GAL1Q11201 340 aa16.3■□□□□ 0.2
SNX6-206ENST00000556162 ZNF792Q3KQV3 632 aa16.3■□□□□ 0.2
SNX6-206ENST00000556162 SAMD3Q8N6K7 520 aa16.3■□□□□ 0.2
SNX6-206ENST00000556162 NSUN7Q8NE18 718 aaKnown RBP16.3■□□□□ 0.2
SNX6-206ENST00000556162 CCDC12Q8WUD4 166 aaPredicted RBP16.3■□□□□ 0.2
SNX6-206ENST00000556162 STK36Q9NRP7 1315 aa16.3■□□□□ 0.2
SNX6-206ENST00000556162 ORC3Q9UBD5 711 aaPredicted RBP16.3■□□□□ 0.2
SNX6-206ENST00000556162 DIS3Q9Y2L1 958 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 223.3 ms