RNA–Protein interactions for RNA: ENST00000539815.5

GNE-205, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 3,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-205ENST00000539815 TRERF1Q96PN7 1200 aa8.87□□□□□ -0.99
GNE-205ENST00000539815 SLC9A7Q96T83 725 aa8.87□□□□□ -0.99
GNE-205ENST00000539815 SCN9AQ15858 1988 aa8.87□□□□□ -0.99
GNE-205ENST00000539815 CLSTN1O94985 981 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 TTLL1O95922 423 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 UTP14CQ5TAP6 766 aaKnown RBP8.86□□□□□ -0.99
GNE-205ENST00000539815 MAP3K21Q5TCX8 1036 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 TMEM57Q8N5G2 664 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 RHPN1Q8TCX5 695 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 KATNAL1Q9BW62 490 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 GPCPD1Q9NPB8 672 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 PIH1D3Q9NQM4 214 aaKnown RBP8.86□□□□□ -0.99
GNE-205ENST00000539815 PHF24Q9UPV7 400 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 AMHP03971 560 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 LHX8Q68G74 356 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 SCFD2Q8WU76 684 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 GUCD1Q96NT3 240 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 NUP88Q99567 741 aaPredicted RBP8.86□□□□□ -0.99
GNE-205ENST00000539815 LRRCC1Q9C099 1032 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 PPP4R2Q9NY27 417 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 TMX2Q9Y320 296 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 GNAT1P11488 350 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 MYCLP12524 364 aaPredicted RBP8.86□□□□□ -0.99
GNE-205ENST00000539815 IQSEC1Q6DN90 963 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 SEPT14Q6ZU15 432 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 RPAP2Q8IXW5 612 aaPredicted RBP8.86□□□□□ -0.99
GNE-205ENST00000539815 UBAC1Q9BSL1 405 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 ZBED9Q6R2W3 1325 aa8.86□□□□□ -0.99
GNE-205ENST00000539815 KIAA0355O15063 1070 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 TPM2P07951 284 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 TXNP10599 105 aaKnown RBP8.85□□□□□ -0.99
GNE-205ENST00000539815 NDUFV1P49821 464 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 TFAP4Q01664 338 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 SP4Q02446 784 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 CCDC184Q52MB2 194 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 ALYREFQ86V81 257 aaKnown RBP8.85□□□□□ -0.99
GNE-205ENST00000539815 GJD3Q8N144 294 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 KAZALD1Q96I82 304 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 POP1Q99575 1024 aaKnown RBP8.85□□□□□ -0.99
GNE-205ENST00000539815 IRF2BPLQ9H1B7 796 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 RNF41Q9H4P4 317 aaPredicted RBP8.85□□□□□ -0.99
GNE-205ENST00000539815 IGFLR1Q9H665 355 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 FAM13BQ9NYF5 915 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 GINS2Q9Y248 185 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 SSC5DA1L4H1 1573 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 COBLO75128 1261 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 CYP2C9P11712 490 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 CAP1Q01518 475 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 SCLYQ96I15 445 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 PCDHA11Q9Y5I1 949 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 PARNO95453 639 aaKnown RBP8.85□□□□□ -0.99
GNE-205ENST00000539815 RABGGTBP53611 331 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 SART3Q15020 963 aaKnown RBP8.85□□□□□ -0.99
GNE-205ENST00000539815 FBXO22Q8NEZ5 403 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 SEPT8Q92599 483 aa8.85□□□□□ -0.99
GNE-205ENST00000539815 DDX60Q8IY21 1712 aaKnown RBP8.84□□□□□ -0.99
GNE-205ENST00000539815 ATRNL1Q5VV63 1379 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 ZNF521Q96K83 1311 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 CA3P07451 260 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 ARHGEF16Q5VV41 709 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 POTEEQ6S8J3 1075 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 WDR11Q9BZH6 1224 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 DCP1AQ9NPI6 582 aaPredicted RBP8.84□□□□□ -0.99
GNE-205ENST00000539815 CLDND1Q9NY35 253 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 PUF60Q9UHX1 559 aaKnown RBP8.84□□□□□ -0.99
GNE-205ENST00000539815 VWA5AO00534 786 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 ZSCAN20P17040 1043 aaPredicted RBP8.84□□□□□ -0.99
GNE-205ENST00000539815 PLCD1P51178 756 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 TIGD5Q53EQ6 642 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 RUFY4Q6ZNE9 571 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 LENG1Q96BZ8 264 aaPredicted RBP8.84□□□□□ -0.99
GNE-205ENST00000539815 PBX4Q9BYU1 374 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.84□□□□□ -0.99
GNE-205ENST00000539815 CYP2D6P10635 497 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 RFX5P48382 616 aaPredicted RBP8.84□□□□□ -0.99
GNE-205ENST00000539815 GNPTABQ3T906 1256 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 RNF207Q6ZRF8 634 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 RALYLQ86SE5 291 aaKnown RBP8.84□□□□□ -0.99
GNE-205ENST00000539815 MCF2L2Q86YR7 1114 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 CLEC10AQ8IUN9 316 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 ABI1Q8IZP0 508 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 KAT14Q9H8E8 782 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 DIAPH3Q9NSV4 1193 aa8.84□□□□□ -0.99
GNE-205ENST00000539815 TNKSO95271 1327 aa8.83□□□□□ -1
GNE-205ENST00000539815 SMIM22K7EJ46 135 aa8.83□□□□□ -1
GNE-205ENST00000539815 NDUFB10O96000 172 aa8.83□□□□□ -1
GNE-205ENST00000539815 MKRN4PQ13434 485 aaPredicted RBP8.83□□□□□ -1
GNE-205ENST00000539815 CCDC178Q5BJE1 867 aa8.83□□□□□ -1
GNE-205ENST00000539815 SYNE3Q6ZMZ3 975 aa8.83□□□□□ -1
GNE-205ENST00000539815 RILPL2Q969X0 211 aa8.83□□□□□ -1
GNE-205ENST00000539815 PNMA6EA0A0J9YXQ4 647 aa8.83□□□□□ -1
GNE-205ENST00000539815 TRIM27P14373 513 aa8.83□□□□□ -1
GNE-205ENST00000539815 USH1GQ495M9 461 aa8.83□□□□□ -1
GNE-205ENST00000539815 UBE2Q1Q7Z7E8 422 aa8.83□□□□□ -1
GNE-205ENST00000539815 TGS1Q96RS0 853 aaKnown RBP8.83□□□□□ -1
GNE-205ENST00000539815 VTA1Q9NP79 307 aa8.83□□□□□ -1
GNE-205ENST00000539815 COL6A1P12109 1028 aa8.83□□□□□ -1
GNE-205ENST00000539815 PLA2G5P39877 138 aa8.83□□□□□ -1
GNE-205ENST00000539815 PUS10Q3MIT2 529 aaKnown RBP8.83□□□□□ -1
GNE-205ENST00000539815 ELMSAN1Q6PJG2 1045 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms