RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 CCDC144BQ3MJ40 725 aa17.56■□□□□ 0.4
RAB40B-202ENST00000538809 DGKHQ86XP1 1220 aa17.56■□□□□ 0.4
RAB40B-202ENST00000538809 ENAHQ8N8S7 591 aaPredicted RBP17.56■□□□□ 0.4
RAB40B-202ENST00000538809 PNMA1Q8ND90 353 aa17.56■□□□□ 0.4
RAB40B-202ENST00000538809 UBE2OQ9C0C9 1292 aaKnown RBP17.56■□□□□ 0.4
RAB40B-202ENST00000538809 KATNBL1Q9H079 304 aa17.56■□□□□ 0.4
RAB40B-202ENST00000538809 ABHD16BQ9H3Z7 469 aa17.56■□□□□ 0.4
RAB40B-202ENST00000538809 PRDM5Q9NQX1 630 aaPredicted RBP17.56■□□□□ 0.4
RAB40B-202ENST00000538809 A0A1W2PQ45 241 aaPredicted RBP17.55■□□□□ 0.4
RAB40B-202ENST00000538809 A0A1W2PQY0 241 aa17.55■□□□□ 0.4
RAB40B-202ENST00000538809 SGSM2O43147 1006 aa17.55■□□□□ 0.4
RAB40B-202ENST00000538809 PTH1RQ03431 593 aa17.55■□□□□ 0.4
RAB40B-202ENST00000538809 RUFY2Q8WXA3 655 aa17.55■□□□□ 0.4
RAB40B-202ENST00000538809 ZSCAN10Q96SZ4 725 aaPredicted RBP17.55■□□□□ 0.4
RAB40B-202ENST00000538809 KRT23Q9C075 422 aa17.55■□□□□ 0.4
RAB40B-202ENST00000538809 KAT14Q9H8E8 782 aa17.55■□□□□ 0.4
RAB40B-202ENST00000538809 ZSWIM5Q9P217 1185 aa17.55■□□□□ 0.4
RAB40B-202ENST00000538809 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.54■□□□□ 0.4
RAB40B-202ENST00000538809 DUSP11O75319 330 aaKnown RBP17.54■□□□□ 0.4
RAB40B-202ENST00000538809 C6orf222P0C671 652 aaPredicted RBP17.54■□□□□ 0.4
RAB40B-202ENST00000538809 BAATQ14032 418 aaPredicted RBP17.54■□□□□ 0.4
RAB40B-202ENST00000538809 CCDC178Q5BJE1 867 aa17.54■□□□□ 0.4
RAB40B-202ENST00000538809 SLC30A10Q6XR72 485 aa17.54■□□□□ 0.4
RAB40B-202ENST00000538809 CENPQQ7L2Z9 268 aaPredicted RBP17.54■□□□□ 0.4
RAB40B-202ENST00000538809 ANKS1AQ92625 1134 aa17.54■□□□□ 0.4
RAB40B-202ENST00000538809 LRCH3Q96II8 777 aa17.54■□□□□ 0.4
RAB40B-202ENST00000538809 UBA5Q9GZZ9 404 aa17.54■□□□□ 0.4
RAB40B-202ENST00000538809 PRKAG2Q9UGJ0 569 aa17.54■□□□□ 0.4
RAB40B-202ENST00000538809 PTPDC1A2A3K4 754 aa17.53■□□□□ 0.4
RAB40B-202ENST00000538809 ASB14A6NK59 587 aa17.53■□□□□ 0.4
RAB40B-202ENST00000538809 PTGS1P23219 599 aa17.53■□□□□ 0.4
RAB40B-202ENST00000538809 ACLYP53396 1101 aa17.53■□□□□ 0.4
RAB40B-202ENST00000538809 USH1GQ495M9 461 aa17.53■□□□□ 0.4
RAB40B-202ENST00000538809 GPATCH4Q5T3I0 446 aaKnown RBP17.53■□□□□ 0.4
RAB40B-202ENST00000538809 CYB5R4Q7L1T6 521 aa17.53■□□□□ 0.4
RAB40B-202ENST00000538809 EEPD1Q7L9B9 569 aa17.53■□□□□ 0.4
RAB40B-202ENST00000538809 FBXO16Q8IX29 292 aaPredicted RBP17.53■□□□□ 0.4
RAB40B-202ENST00000538809 TDHQ8IZJ6 230 aa17.53■□□□□ 0.4
RAB40B-202ENST00000538809 KLHDC9Q8NEP7 349 aa17.53■□□□□ 0.4
RAB40B-202ENST00000538809 UBAC1Q9BSL1 405 aa17.53■□□□□ 0.4
RAB40B-202ENST00000538809 CNNM2Q9H8M5 875 aa17.53■□□□□ 0.4
RAB40B-202ENST00000538809 PDLIM7Q9NR12 457 aa17.53■□□□□ 0.4
RAB40B-202ENST00000538809 MYH7BA7E2Y1 1941 aa17.53■□□□□ 0.4
RAB40B-202ENST00000538809 KCNA10Q16322 511 aa17.52■□□□□ 0.4
RAB40B-202ENST00000538809 SH3RF1Q7Z6J0 888 aa17.52■□□□□ 0.4
RAB40B-202ENST00000538809 SKAP1Q86WV1 359 aa17.52■□□□□ 0.4
RAB40B-202ENST00000538809 CLEC4DQ8WXI8 215 aa17.52■□□□□ 0.4
RAB40B-202ENST00000538809 LBHD1Q9BQE6 289 aaPredicted RBP17.52■□□□□ 0.4
RAB40B-202ENST00000538809 TSEN34Q9BSV6 310 aaKnown RBP17.52■□□□□ 0.4
RAB40B-202ENST00000538809 UPF3AQ9H1J1 476 aaKnown RBP17.52■□□□□ 0.4
RAB40B-202ENST00000538809 TAF6LQ9Y6J9 622 aa17.52■□□□□ 0.4
RAB40B-202ENST00000538809 WDR19Q8NEZ3 1342 aa17.51■□□□□ 0.39
RAB40B-202ENST00000538809 PQBP1O60828 265 aaKnown RBP17.51■□□□□ 0.39
RAB40B-202ENST00000538809 CYP21A2P08686 494 aa17.51■□□□□ 0.39
RAB40B-202ENST00000538809 CALML3P27482 149 aa17.51■□□□□ 0.39
RAB40B-202ENST00000538809 CST5P28325 142 aaPredicted RBP17.51■□□□□ 0.39
RAB40B-202ENST00000538809 ALDH5A1P51649 535 aaPredicted RBP17.51■□□□□ 0.39
RAB40B-202ENST00000538809 TNFAIP2Q03169 654 aa17.51■□□□□ 0.39
RAB40B-202ENST00000538809 TLE2Q04725 743 aa17.51■□□□□ 0.39
RAB40B-202ENST00000538809 CDC37Q16543 378 aaPredicted RBP17.51■□□□□ 0.39
RAB40B-202ENST00000538809 IFIT1BQ5T764 474 aaKnown RBP17.51■□□□□ 0.39
RAB40B-202ENST00000538809 C1orf53Q5VUE5 145 aa17.51■□□□□ 0.39
RAB40B-202ENST00000538809 CCSAPQ6IQ19 270 aaPredicted RBP17.51■□□□□ 0.39
RAB40B-202ENST00000538809 NOL8Q76FK4 1167 aaKnown RBP17.51■□□□□ 0.39
RAB40B-202ENST00000538809 STARD7Q9NQZ5 370 aa17.51■□□□□ 0.39
RAB40B-202ENST00000538809 PDGFCQ9NRA1 345 aa17.51■□□□□ 0.39
RAB40B-202ENST00000538809 TRIM43BA6NCK2 446 aa17.5■□□□□ 0.39
RAB40B-202ENST00000538809 MOXD2PA6NHM9 499 aa17.5■□□□□ 0.39
RAB40B-202ENST00000538809 GJA9P57773 515 aa17.5■□□□□ 0.39
RAB40B-202ENST00000538809 BEX3Q00994 111 aa17.5■□□□□ 0.39
RAB40B-202ENST00000538809 SEC23AQ15436 765 aa17.5■□□□□ 0.39
RAB40B-202ENST00000538809 ASPRV1Q53RT3 343 aa17.5■□□□□ 0.39
RAB40B-202ENST00000538809 RNF207Q6ZRF8 634 aa17.5■□□□□ 0.39
RAB40B-202ENST00000538809 TLK2Q86UE8 772 aa17.5■□□□□ 0.39
RAB40B-202ENST00000538809 ADGRF4Q8IZF3 695 aa17.5■□□□□ 0.39
RAB40B-202ENST00000538809 TRIM43Q96BQ3 446 aaPredicted RBP17.5■□□□□ 0.39
RAB40B-202ENST00000538809 SPC25Q9HBM1 224 aa17.5■□□□□ 0.39
RAB40B-202ENST00000538809 U3KPZ7 1027 aaPredicted RBP17.5■□□□□ 0.39
RAB40B-202ENST00000538809 CTAGE5O15320 804 aa17.49■□□□□ 0.39
RAB40B-202ENST00000538809 DHX16O60231 1041 aaKnown RBP17.49■□□□□ 0.39
RAB40B-202ENST00000538809 ASGR1P07306 291 aa17.49■□□□□ 0.39
RAB40B-202ENST00000538809 PARP1P09874 1014 aaKnown RBP17.49■□□□□ 0.39
RAB40B-202ENST00000538809 TRDNQ13061 729 aa17.49■□□□□ 0.39
RAB40B-202ENST00000538809 GNASQ5JWF2 1037 aa17.49■□□□□ 0.39
RAB40B-202ENST00000538809 TMEM63BQ5T3F8 832 aa17.49■□□□□ 0.39
RAB40B-202ENST00000538809 STOX1Q6ZVD7 989 aa17.49■□□□□ 0.39
RAB40B-202ENST00000538809 NUP133Q8WUM0 1156 aa17.49■□□□□ 0.39
RAB40B-202ENST00000538809 MAP4K1Q92918 833 aa17.49■□□□□ 0.39
RAB40B-202ENST00000538809 ADD3Q9UEY8 706 aaKnown RBP17.49■□□□□ 0.39
RAB40B-202ENST00000538809 CLTBP09497 229 aa17.48■□□□□ 0.39
RAB40B-202ENST00000538809 SMPD1P17405 629 aa17.48■□□□□ 0.39
RAB40B-202ENST00000538809 RPS6P62753 249 aaKnown RBP17.48■□□□□ 0.39
RAB40B-202ENST00000538809 QRICH1Q2TAL8 776 aa17.48■□□□□ 0.39
RAB40B-202ENST00000538809 BMP2KLQ5H9B9 411 aa17.48■□□□□ 0.39
RAB40B-202ENST00000538809 TAPT1Q6NXT6 567 aa17.48■□□□□ 0.39
RAB40B-202ENST00000538809 STAG2Q8N3U4 1231 aa17.48■□□□□ 0.39
RAB40B-202ENST00000538809 PCSK9Q8NBP7 692 aaKnown RBP17.48■□□□□ 0.39
RAB40B-202ENST00000538809 MORC4Q8TE76 937 aa17.48■□□□□ 0.39
RAB40B-202ENST00000538809 BADQ92934 168 aa17.48■□□□□ 0.39
RAB40B-202ENST00000538809 GLT1D1Q96MS3 346 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms