RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 NHEJ1Q9H9Q4 299 aaPredicted RBP11.26□□□□□ -0.61
NCAPD3-214ENST00000534548 HDAC6Q9UBN7 1215 aa11.26□□□□□ -0.61
NCAPD3-214ENST00000534548 hCG_1642624A0A1W2PR95 340 aa11.26□□□□□ -0.61
NCAPD3-214ENST00000534548 ENO4A6NNW6 628 aa11.26□□□□□ -0.61
NCAPD3-214ENST00000534548 RPN1P04843 607 aaKnown RBP11.26□□□□□ -0.61
NCAPD3-214ENST00000534548 IRAK1P51617 712 aa11.26□□□□□ -0.61
NCAPD3-214ENST00000534548 PLCB3Q01970 1234 aa11.26□□□□□ -0.61
NCAPD3-214ENST00000534548 ANKRD20A3Q5VUR7 823 aa11.26□□□□□ -0.61
NCAPD3-214ENST00000534548 EEF2KMTQ96G04 330 aa11.26□□□□□ -0.61
NCAPD3-214ENST00000534548 C6orf50Q9HD87 102 aa11.26□□□□□ -0.61
NCAPD3-214ENST00000534548 AMFRQ9UKV5 643 aa11.26□□□□□ -0.61
NCAPD3-214ENST00000534548 DIP2AQ14689 1571 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 EYA2O00167 538 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 TNFAIP3P21580 790 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 RANBP1P43487 201 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 GUCY1A3Q02108 690 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 LETM2Q2VYF4 491 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 HNRNPLLQ8WVV9 542 aaKnown RBP11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 TUBGCP2Q9BSJ2 902 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 CD248Q9HCU0 757 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 H3BQF6 201 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 NOL3O60936 208 aaKnown RBP11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 KRT28Q7Z3Y7 464 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 KRT15P19012 456 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 CTDSPL2Q05D32 466 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 RNF14Q9UBS8 474 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 HPCAL4Q9UM19 191 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 ATP8A1Q9Y2Q0 1164 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 EEF2P13639 858 aaKnown RBP11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 DHX9Q08211 1270 aaKnown RBP11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 PROSER2Q86WR7 435 aaPredicted RBP11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 CMTR1Q8N1G2 835 aaKnown RBP11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 HAUS7Q99871 368 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 ABHD10Q9NUJ1 306 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 HAUS2Q9NVX0 235 aa11.25□□□□□ -0.61
NCAPD3-214ENST00000534548 EIF4E1BA6NMX2 242 aaKnown RBP11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 BAG2O95816 211 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 COG7P83436 770 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 DRP2Q13474 957 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 DIXDC1Q155Q3 683 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 CLUL1Q15846 466 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 UAP1Q16222 522 aaPredicted RBP11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 CEP120Q8N960 986 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 ELAC2Q9BQ52 826 aaKnown RBP11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 TARSL2A2RTX5 802 aaKnown RBP11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 ERMNQ8TAM6 284 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 METTL22Q9BUU2 404 aaPredicted RBP11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 LSM14BQ9BX40 385 aaKnown RBP11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 PPP1R12AO14974 1030 aaPredicted RBP11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 CREB3O43889 395 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 KRT31Q15323 416 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 CCDC110Q8TBZ0 833 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 XAGE2Q96GT9 111 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 CRNKL1Q9BZJ0 848 aaKnown RBP11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 BATF3Q9NR55 127 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 IQSEC3Q9UPP2 1182 aaPredicted RBP11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 SCP2P22307 547 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 EEF1GP26641 437 aaKnown RBP11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 PDE1CQ14123 709 aaPredicted RBP11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 DYMQ7RTS9 669 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 APBB1IPQ7Z5R6 666 aaPredicted RBP11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 ADAT2Q7Z6V5 191 aaKnown RBP11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 CCDC65Q8IXS2 484 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 IFNL2Q8IZJ0 200 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 ZNF473Q8WTR7 871 aaKnown RBP11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 EPN3Q9H201 632 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 MRPL44Q9H9J2 332 aaKnown RBP11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 ZNF446Q9NWS9 450 aa11.24□□□□□ -0.61
NCAPD3-214ENST00000534548 RGPD8O14715 1765 aaPredicted RBP11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 MAGEB6P1A0A0J9YX57 407 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 TROVE2P10155 538 aaKnown RBP eCLIP11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 SKIP12755 728 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 SEPT2Q15019 361 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 RETREG2Q8NC44 543 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 ZNF594Q96JF6 807 aaPredicted RBP11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 TSPY3P0CV98 308 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 TSPY8P0CW00 308 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 DESP17661 470 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 PPP2R5EQ16537 467 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 BEND6Q5SZJ8 279 aaPredicted RBP11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 LRRN4CLQ8ND94 238 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 ABTB1Q969K4 478 aaPredicted RBP11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 CTTNBP2NLQ9P2B4 639 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 USP42Q9H9J4 1324 aaKnown RBP11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 TEX33O43247 280 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 PPP1R37O75864 691 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 FGAP02671 866 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 RESP18Q5W5W9 173 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 CCDC13Q8IYE1 715 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 CNOT6LQ96LI5 555 aaKnown RBP11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 FTCDO95954 541 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 PDHA1P08559 390 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 GLE1Q53GS7 698 aaKnown RBP11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 NAA35Q5VZE5 725 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 KCNV2Q8TDN2 545 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 ARMT1Q9H993 441 aa11.23□□□□□ -0.61
NCAPD3-214ENST00000534548 PXDNLA1KZ92 1463 aa11.22□□□□□ -0.61
NCAPD3-214ENST00000534548 ANO9A1A5B4 782 aa11.22□□□□□ -0.61
NCAPD3-214ENST00000534548 ATP2A2P16615 1042 aaKnown RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms