RNA–Protein interactions for RNA: ENST00000514588.1

CCND3-221, Transcript of cyclin D3, humanhuman

TSL 4

Gene CCND3, Length 490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-221ENST00000514588 TTBK2Q6IQ55 1244 aa28.42■■■□□ 2.14
CCND3-221ENST00000514588 VTI1AQ96AJ9 217 aa28.42■■■□□ 2.14
CCND3-221ENST00000514588 LNPKQ9C0E8 428 aa28.42■■■□□ 2.14
CCND3-221ENST00000514588 CCPG1Q9ULG6 757 aa28.42■■■□□ 2.14
CCND3-221ENST00000514588 MROH7Q68CQ1 1323 aa28.42■■■□□ 2.14
CCND3-221ENST00000514588 ICAM1P05362 532 aa28.41■■■□□ 2.14
CCND3-221ENST00000514588 TOP1P11387 765 aaKnown RBP28.41■■■□□ 2.14
CCND3-221ENST00000514588 BTNL9Q6UXG8 535 aa28.41■■■□□ 2.14
CCND3-221ENST00000514588 TMEM47Q9BQJ4 181 aa28.41■■■□□ 2.14
CCND3-221ENST00000514588 RANBP17Q9H2T7 1088 aaKnown RBP28.41■■■□□ 2.14
CCND3-221ENST00000514588 SEMA6BQ9H3T3 888 aa28.41■■■□□ 2.14
CCND3-221ENST00000514588 TCP11L1Q9NUJ3 509 aa28.41■■■□□ 2.14
CCND3-221ENST00000514588 ZMYM6O95789 1325 aa28.41■■■□□ 2.14
CCND3-221ENST00000514588 A0A0C4DFX4 3053 aa28.4■■■□□ 2.14
CCND3-221ENST00000514588 A0A0U1RQG5 324 aaPredicted RBP28.4■■■□□ 2.14
CCND3-221ENST00000514588 ARVCFO00192 962 aa28.4■■■□□ 2.14
CCND3-221ENST00000514588 TIMP1P01033 207 aa28.4■■■□□ 2.14
CCND3-221ENST00000514588 SLC16A2P36021 539 aa28.4■■■□□ 2.14
CCND3-221ENST00000514588 BEX3Q00994 111 aa28.4■■■□□ 2.14
CCND3-221ENST00000514588 NOL8Q76FK4 1167 aaKnown RBP28.4■■■□□ 2.14
CCND3-221ENST00000514588 GNEQ9Y223 722 aaKnown RBP28.4■■■□□ 2.14
CCND3-221ENST00000514588 CUL9Q8IWT3 2517 aa28.39■■■□□ 2.14
CCND3-221ENST00000514588 HAND2P61296 217 aa28.39■■■□□ 2.14
CCND3-221ENST00000514588 NSMFQ6X4W1 530 aa28.39■■■□□ 2.14
CCND3-221ENST00000514588 CDX2Q99626 313 aaPredicted RBP28.39■■■□□ 2.14
CCND3-221ENST00000514588 TTYH1Q9H313 450 aaPredicted RBP28.39■■■□□ 2.14
CCND3-221ENST00000514588 CCDC171Q6TFL3 1326 aa28.39■■■□□ 2.13
CCND3-221ENST00000514588 TRIM6-TRIM34B2RNG4 842 aa28.38■■■□□ 2.13
CCND3-221ENST00000514588 SYDE2Q5VT97 1194 aa28.38■■■□□ 2.13
CCND3-221ENST00000514588 TLK2Q86UE8 772 aa28.38■■■□□ 2.13
CCND3-221ENST00000514588 SMC5Q8IY18 1101 aa28.38■■■□□ 2.13
CCND3-221ENST00000514588 PURBQ96QR8 312 aaKnown RBP28.38■■■□□ 2.13
CCND3-221ENST00000514588 PDGFCQ9NRA1 345 aa28.38■■■□□ 2.13
CCND3-221ENST00000514588 LRRC37A2A6NM11 1700 aa28.38■■■□□ 2.13
CCND3-221ENST00000514588 SMPD1P17405 629 aa28.37■■■□□ 2.13
CCND3-221ENST00000514588 PTGS1P23219 599 aa28.37■■■□□ 2.13
CCND3-221ENST00000514588 AAMPQ13685 434 aa28.37■■■□□ 2.13
CCND3-221ENST00000514588 MFSD5Q6N075 450 aa28.37■■■□□ 2.13
CCND3-221ENST00000514588 TAPT1Q6NXT6 567 aa28.37■■■□□ 2.13
CCND3-221ENST00000514588 FAM126BQ8IXS8 530 aa28.37■■■□□ 2.13
CCND3-221ENST00000514588 GPCPD1Q9NPB8 672 aa28.37■■■□□ 2.13
CCND3-221ENST00000514588 FRMPD2Q68DX3 1309 aaPredicted RBP28.37■■■□□ 2.13
CCND3-221ENST00000514588 CXCL17Q6UXB2 119 aa28.36■■■□□ 2.13
CCND3-221ENST00000514588 EEPD1Q7L9B9 569 aa28.36■■■□□ 2.13
CCND3-221ENST00000514588 TBC1D10CQ8IV04 446 aa28.36■■■□□ 2.13
CCND3-221ENST00000514588 FBXO16Q8IX29 292 aaPredicted RBP28.36■■■□□ 2.13
CCND3-221ENST00000514588 MORC4Q8TE76 937 aa28.36■■■□□ 2.13
CCND3-221ENST00000514588 RILPL2Q969X0 211 aa28.36■■■□□ 2.13
CCND3-221ENST00000514588 FSCN1Q16658 493 aaKnown RBP28.35■■■□□ 2.13
CCND3-221ENST00000514588 AKNAD1Q5T1N1 836 aa28.35■■■□□ 2.13
CCND3-221ENST00000514588 IQSEC1Q6DN90 963 aa28.35■■■□□ 2.13
CCND3-221ENST00000514588 B4GALNT3Q6L9W6 998 aa28.35■■■□□ 2.13
CCND3-221ENST00000514588 AP5M1Q9H0R1 490 aa28.35■■■□□ 2.13
CCND3-221ENST00000514588 LCTP09848 1927 aa28.35■■■□□ 2.13
CCND3-221ENST00000514588 NFIBO00712 420 aa28.34■■■□□ 2.13
CCND3-221ENST00000514588 DYNC1LI2O43237 492 aaPredicted RBP28.34■■■□□ 2.13
CCND3-221ENST00000514588 PDHBP11177 359 aa28.34■■■□□ 2.13
CCND3-221ENST00000514588 BAATQ14032 418 aaPredicted RBP28.34■■■□□ 2.13
CCND3-221ENST00000514588 TMEM63BQ5T3F8 832 aa28.34■■■□□ 2.13
CCND3-221ENST00000514588 MFSD6Q6ZSS7 791 aa28.34■■■□□ 2.13
CCND3-221ENST00000514588 SLC43A3Q8NBI5 491 aa28.34■■■□□ 2.13
CCND3-221ENST00000514588 TTC14Q96N46 770 aa28.34■■■□□ 2.13
CCND3-221ENST00000514588 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.34■■■□□ 2.13
CCND3-221ENST00000514588 RWDD1Q9H446 243 aaPredicted RBP28.34■■■□□ 2.13
CCND3-221ENST00000514588 VTA1Q9NP79 307 aa28.34■■■□□ 2.13
CCND3-221ENST00000514588 TLR3O15455 904 aaKnown RBP28.33■■■□□ 2.13
CCND3-221ENST00000514588 CABYRO75952 493 aa28.33■■■□□ 2.13
CCND3-221ENST00000514588 CD4P01730 458 aa28.33■■■□□ 2.13
CCND3-221ENST00000514588 PCP11498 1178 aaKnown RBP28.33■■■□□ 2.13
CCND3-221ENST00000514588 SDSP20132 328 aa28.33■■■□□ 2.13
CCND3-221ENST00000514588 PPIGQ13427 754 aaKnown RBP eCLIP28.33■■■□□ 2.13
CCND3-221ENST00000514588 C16orf59Q7L2K0 433 aa28.33■■■□□ 2.13
CCND3-221ENST00000514588 Q9Y3F1 56 aa28.33■■■□□ 2.13
CCND3-221ENST00000514588 ZNF543Q08ER8 600 aa28.32■■■□□ 2.12
CCND3-221ENST00000514588 CHD1LQ86WJ1 897 aa28.32■■■□□ 2.12
CCND3-221ENST00000514588 PLEKHM2Q8IWE5 1019 aa28.32■■■□□ 2.12
CCND3-221ENST00000514588 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.32■■■□□ 2.12
CCND3-221ENST00000514588 CLEC4DQ8WXI8 215 aa28.32■■■□□ 2.12
CCND3-221ENST00000514588 MYLIPQ8WY64 445 aa28.32■■■□□ 2.12
CCND3-221ENST00000514588 PPP1R12CQ9BZL4 782 aa28.32■■■□□ 2.12
CCND3-221ENST00000514588 ADD3Q9UEY8 706 aaKnown RBP28.32■■■□□ 2.12
CCND3-221ENST00000514588 TMEM265A0A087WTH1 108 aa28.31■■■□□ 2.12
CCND3-221ENST00000514588 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.31■■■□□ 2.12
CCND3-221ENST00000514588 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.31■■■□□ 2.12
CCND3-221ENST00000514588 SNHG28P0DPA3 235 aa28.31■■■□□ 2.12
CCND3-221ENST00000514588 CSF2RAP15509 400 aa28.31■■■□□ 2.12
CCND3-221ENST00000514588 ALDH5A1P51649 535 aaPredicted RBP28.31■■■□□ 2.12
CCND3-221ENST00000514588 OSBPL3Q9H4L5 887 aa28.31■■■□□ 2.12
CCND3-221ENST00000514588 GRIN2DO15399 1336 aa28.31■■■□□ 2.12
CCND3-221ENST00000514588 ZEB2O60315 1214 aa28.3■■■□□ 2.12
CCND3-221ENST00000514588 IGHDP01880 384 aa28.3■■■□□ 2.12
CCND3-221ENST00000514588 MFAP1P55081 439 aaKnown RBP28.3■■■□□ 2.12
CCND3-221ENST00000514588 NUCB1Q02818 461 aa28.3■■■□□ 2.12
CCND3-221ENST00000514588 TMEM240Q5SV17 173 aa28.3■■■□□ 2.12
CCND3-221ENST00000514588 KIAA1211Q6ZU35 1233 aa28.3■■■□□ 2.12
CCND3-221ENST00000514588 TMEM199Q8N511 208 aa28.3■■■□□ 2.12
CCND3-221ENST00000514588 RNF41Q9H4P4 317 aaPredicted RBP28.3■■■□□ 2.12
CCND3-221ENST00000514588 NEDD4P46934 1319 aa28.29■■■□□ 2.12
CCND3-221ENST00000514588 PTPDC1A2A3K4 754 aa28.29■■■□□ 2.12
CCND3-221ENST00000514588 ITGA7Q13683 1181 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms